RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 TMX4Q9H1E5 349 aaPredicted RBP12.08□□□□□ -0.48
PDGFRA-209ENST00000512143 CHD4Q14839 1912 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 A0A0D9SFI3 127 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 RNF113AO15541 343 aaKnown RBP12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 EPB41L2O43491 1005 aaKnown RBP12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 IGSF3O75054 1194 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 ZFYP08048 801 aaPredicted RBP12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 NMIQ13287 307 aaPredicted RBP12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 ZMYM1Q5SVZ6 1142 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 CWC27Q6UX04 472 aaKnown RBP12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 PSMD1Q99460 953 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 USP26Q9BXU7 913 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 COA1Q9GZY4 146 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 DIAPH3Q9NSV4 1193 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 MYH7P12883 1935 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 RAD50Q92878 1312 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 SALL1Q9NSC2 1324 aa12.07□□□□□ -0.48
PDGFRA-209ENST00000512143 MYH13Q9UKX3 1938 aa12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 TCRBV5S4A2TA0A5A2 114 aa12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 ADD2P35612 726 aa12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 MFAP1P55081 439 aaKnown RBP12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 UBE3CQ15386 1083 aa12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 WASHC4Q2M389 1173 aa12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 SLFNL1Q499Z3 407 aa12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 DALRD3Q5D0E6 543 aaKnown RBP12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 RUFY2Q8WXA3 655 aa12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 TBC1D32Q96NH3 1257 aa12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 EYA3Q99504 573 aa12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 ZC3H12CQ9C0D7 883 aaKnown RBP12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 HELLSQ9NRZ9 838 aa12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 RBM19Q9Y4C8 960 aaKnown RBP12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 FAM205AQ6ZU69 1335 aa12.06□□□□□ -0.48
PDGFRA-209ENST00000512143 REC8O95072 547 aa12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 PDE6AP16499 860 aa12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 RBM25P49756 843 aaKnown RBP12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 KIAA2012Q0VF49 1180 aa12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 LRRFIP1Q32MZ4 808 aaKnown RBP12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 MCMDC2Q4G0Z9 681 aa12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 SOGA3Q5TF21 947 aa12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 SUPT20HQ8NEM7 779 aa12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 NLGN2Q8NFZ4 835 aa12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 WDR66Q8TBY9 1149 aa12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 LSG1Q9H089 658 aaKnown RBP12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 VPS33BQ9H267 617 aa12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 WWC3Q9ULE0 1092 aa12.05□□□□□ -0.48
PDGFRA-209ENST00000512143 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 RIMBP2O15034 1052 aa12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 MAP3K12Q12852 859 aa12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 SLC9C2Q5TAH2 1124 aa12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 ZSCAN25Q6NSZ9 544 aa12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 TMED8Q6PL24 325 aaPredicted RBP12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 PODNQ7Z5L7 613 aa12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 ZNF589Q86UQ0 364 aaPredicted RBP12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 ZNF384Q8TF68 577 aa12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 APPBP2Q92624 585 aa12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 OSBP2Q969R2 916 aa12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 SEC62Q99442 399 aaKnown RBP12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 PPP1R1BQ9UD71 204 aaPredicted RBP12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 SRCAPQ6ZRS2 3230 aa12.04□□□□□ -0.48
PDGFRA-209ENST00000512143 IDH1O75874 414 aaKnown RBP12.03□□□□□ -0.48
PDGFRA-209ENST00000512143 IL17RAQ96F46 866 aa12.03□□□□□ -0.48
PDGFRA-209ENST00000512143 C22orf23Q9BZE7 217 aa12.03□□□□□ -0.48
PDGFRA-209ENST00000512143 FHDC1Q9C0D6 1143 aaPredicted RBP12.03□□□□□ -0.48
PDGFRA-209ENST00000512143 MAST3O60307 1309 aa12.03□□□□□ -0.48
PDGFRA-209ENST00000512143 ZNF532Q9HCE3 1301 aa12.03□□□□□ -0.48
PDGFRA-209ENST00000512143 ARFGEF1Q9Y6D6 1849 aa12.02□□□□□ -0.48
PDGFRA-209ENST00000512143 SCN9AQ15858 1988 aa12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 M0R2C6 588 aa12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 FRAT2O75474 233 aaPredicted RBP12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 PTH1RQ03431 593 aa12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 CHAF1AQ13111 956 aaPredicted RBP12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 DOK7Q18PE1 504 aa12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 ZGPATQ8N5A5 531 aaKnown RBP12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 MAGEB6Q8N7X4 407 aa12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 MAP4K1Q92918 833 aa12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 NSUN4Q96CB9 384 aaKnown RBP12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 PUS7LQ9H0K6 701 aaKnown RBP12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 UPF2Q9HAU5 1272 aaKnown RBP12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 LRP2BPQ9P2M1 347 aa12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 ABCF2Q9UG63 623 aa12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 ZNF646O15015 1829 aaPredicted RBP12.02□□□□□ -0.49
PDGFRA-209ENST00000512143 NFKBIEO00221 500 aa12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 PRDX5P30044 214 aa12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 GRIK5Q16478 980 aa12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 AOC3Q16853 763 aa12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 SPTY2D1Q68D10 685 aaPredicted RBP12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 CCDC129Q6ZRS4 1044 aa12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 ERICH6Q7L0X2 663 aa12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 TBC1D22AQ8WUA7 517 aa12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 KCNB2Q92953 911 aa12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 KIF2CQ99661 725 aa12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 SYT17Q9BSW7 474 aa12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 ANO2Q9NQ90 1003 aa12.01□□□□□ -0.49
PDGFRA-209ENST00000512143 JAG2Q9Y219 1238 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms