RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 OGFOD1Q8N543 542 aa20.59■□□□□ 0.89
DDX41-213ENST00000512027 TDRD7Q8NHU6 1098 aaKnown RBP20.59■□□□□ 0.89
DDX41-213ENST00000512027 TLL2Q9Y6L7 1015 aa20.59■□□□□ 0.89
DDX41-213ENST00000512027 ECM29Q5VYK3 1845 aa20.59■□□□□ 0.89
DDX41-213ENST00000512027 RLBP1P12271 317 aa20.58■□□□□ 0.89
DDX41-213ENST00000512027 SULF1Q8IWU6 871 aa20.58■□□□□ 0.89
DDX41-213ENST00000512027 WNT10BO00744 389 aa20.57■□□□□ 0.88
DDX41-213ENST00000512027 FGFR2P21802 821 aa20.57■□□□□ 0.88
DDX41-213ENST00000512027 BCAMP50895 628 aa20.57■□□□□ 0.88
DDX41-213ENST00000512027 PUM3Q15397 648 aaKnown RBP20.57■□□□□ 0.88
DDX41-213ENST00000512027 CYP4F22Q6NT55 531 aa20.57■□□□□ 0.88
DDX41-213ENST00000512027 FBXO33Q7Z6M2 555 aa20.57■□□□□ 0.88
DDX41-213ENST00000512027 THSD7BQ9C0I4 1608 aa20.56■□□□□ 0.88
DDX41-213ENST00000512027 FAM205AQ6ZU69 1335 aa20.56■□□□□ 0.88
DDX41-213ENST00000512027 SRGAP3O43295 1099 aa20.56■□□□□ 0.88
DDX41-213ENST00000512027 HSPA1AP0DMV8 641 aaKnown RBP20.56■□□□□ 0.88
DDX41-213ENST00000512027 HSPA1BP0DMV9 641 aaKnown RBP20.56■□□□□ 0.88
DDX41-213ENST00000512027 SAPCD2Q86UD0 394 aa20.56■□□□□ 0.88
DDX41-213ENST00000512027 CDCA5Q96FF9 252 aa20.56■□□□□ 0.88
DDX41-213ENST00000512027 HDAC9Q9UKV0 1011 aa20.56■□□□□ 0.88
DDX41-213ENST00000512027 WDR33Q9C0J8 1336 aaKnown RBP20.55■□□□□ 0.88
DDX41-213ENST00000512027 CHAF1AQ13111 956 aaPredicted RBP20.55■□□□□ 0.88
DDX41-213ENST00000512027 PRAMEF18Q5VWM3 479 aa20.55■□□□□ 0.88
DDX41-213ENST00000512027 VPS37DQ86XT2 251 aa20.55■□□□□ 0.88
DDX41-213ENST00000512027 FTSJ3Q8IY81 847 aaKnown RBP20.55■□□□□ 0.88
DDX41-213ENST00000512027 HDAC5Q9UQL6 1122 aa20.55■□□□□ 0.88
DDX41-213ENST00000512027 AOX1Q06278 1338 aa20.54■□□□□ 0.88
DDX41-213ENST00000512027 CIAO1O76071 339 aa20.54■□□□□ 0.88
DDX41-213ENST00000512027 GNAI2P04899 355 aa20.54■□□□□ 0.88
DDX41-213ENST00000512027 IFIT1P09914 478 aaKnown RBP20.54■□□□□ 0.88
DDX41-213ENST00000512027 GRIK5Q16478 980 aa20.54■□□□□ 0.88
DDX41-213ENST00000512027 CAVIN4Q5BKX8 364 aa20.54■□□□□ 0.88
DDX41-213ENST00000512027 MFSD14BQ5SR56 506 aa20.54■□□□□ 0.88
DDX41-213ENST00000512027 ITPRIPQ8IWB1 547 aa20.54■□□□□ 0.88
DDX41-213ENST00000512027 DZIP1LQ8IYY4 767 aaKnown RBP20.54■□□□□ 0.88
DDX41-213ENST00000512027 ZBED3Q96IU2 234 aaPredicted RBP20.54■□□□□ 0.88
DDX41-213ENST00000512027 CAPNS2Q96L46 248 aa20.54■□□□□ 0.88
DDX41-213ENST00000512027 C1orf115Q9H7X2 142 aa20.54■□□□□ 0.88
DDX41-213ENST00000512027 COPRSQ9NQ92 184 aa20.54■□□□□ 0.88
DDX41-213ENST00000512027 PITPNM2Q9BZ72 1349 aa20.53■□□□□ 0.88
DDX41-213ENST00000512027 PNMA6EA0A0J9YXQ4 647 aa20.53■□□□□ 0.88
DDX41-213ENST00000512027 SLC5A1P13866 664 aa20.53■□□□□ 0.88
DDX41-213ENST00000512027 FKBP1AP62942 108 aaKnown RBP20.53■□□□□ 0.88
DDX41-213ENST00000512027 MTX1Q13505 466 aa20.53■□□□□ 0.88
DDX41-213ENST00000512027 ATP2B3Q16720 1220 aa20.53■□□□□ 0.88
DDX41-213ENST00000512027 GBA2Q9HCG7 927 aaPredicted RBP20.53■□□□□ 0.88
DDX41-213ENST00000512027 COL1A1P02452 1464 aaPredicted RBP20.53■□□□□ 0.88
DDX41-213ENST00000512027 AOC2O75106 756 aa20.52■□□□□ 0.88
DDX41-213ENST00000512027 FRAT2O75474 233 aaPredicted RBP20.52■□□□□ 0.88
DDX41-213ENST00000512027 DLGAP5Q15398 846 aa20.52■□□□□ 0.88
DDX41-213ENST00000512027 CFAP100Q494V2 611 aa20.52■□□□□ 0.88
DDX41-213ENST00000512027 PANK1Q8TE04 598 aa20.52■□□□□ 0.88
DDX41-213ENST00000512027 LPIN2Q92539 896 aa20.52■□□□□ 0.88
DDX41-213ENST00000512027 CEP126Q9P2H0 1117 aa20.52■□□□□ 0.88
DDX41-213ENST00000512027 FBXO3Q9UK99 471 aa20.52■□□□□ 0.88
DDX41-213ENST00000512027 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.52■□□□□ 0.88
DDX41-213ENST00000512027 IL15P40933 162 aaPredicted RBP20.51■□□□□ 0.87
DDX41-213ENST00000512027 HUNKP57058 714 aa20.51■□□□□ 0.87
DDX41-213ENST00000512027 CLRN2A0PK11 232 aa20.5■□□□□ 0.87
DDX41-213ENST00000512027 ADORA1P30542 326 aa20.5■□□□□ 0.87
DDX41-213ENST00000512027 RBM5P52756 815 aaKnown RBP eCLIP20.5■□□□□ 0.87
DDX41-213ENST00000512027 PRMT6Q96LA8 375 aaPredicted RBP20.5■□□□□ 0.87
DDX41-213ENST00000512027 TTF2Q9UNY4 1162 aaKnown RBP20.5■□□□□ 0.87
DDX41-213ENST00000512027 PAPPA2Q9BXP8 1791 aa20.49■□□□□ 0.87
DDX41-213ENST00000512027 SPDYE2BA6NHP3 402 aa20.49■□□□□ 0.87
DDX41-213ENST00000512027 SPDYE6P0CI01 402 aa20.49■□□□□ 0.87
DDX41-213ENST00000512027 TFCP2Q12800 502 aa20.49■□□□□ 0.87
DDX41-213ENST00000512027 MOB2Q70IA6 237 aa20.49■□□□□ 0.87
DDX41-213ENST00000512027 C2orf69Q8N8R5 385 aa20.49■□□□□ 0.87
DDX41-213ENST00000512027 MMP14P50281 582 aa20.48■□□□□ 0.87
DDX41-213ENST00000512027 MTMR14Q8NCE2 650 aa20.48■□□□□ 0.87
DDX41-213ENST00000512027 ZBTB7BO15156 539 aaPredicted RBP20.47■□□□□ 0.87
DDX41-213ENST00000512027 FOXN1O15353 648 aa20.47■□□□□ 0.87
DDX41-213ENST00000512027 ECE1P42892 770 aa20.47■□□□□ 0.87
DDX41-213ENST00000512027 PHKA1P46020 1223 aa20.47■□□□□ 0.87
DDX41-213ENST00000512027 ZIC5Q96T25 663 aa20.47■□□□□ 0.87
DDX41-213ENST00000512027 VEZTQ9HBM0 779 aa20.47■□□□□ 0.87
DDX41-213ENST00000512027 TIMM10P62072 90 aa20.46■□□□□ 0.87
DDX41-213ENST00000512027 APOBEC3FQ8IUX4 373 aaKnown RBP20.46■□□□□ 0.87
DDX41-213ENST00000512027 HHIPL1Q96JK4 782 aa20.46■□□□□ 0.87
DDX41-213ENST00000512027 RCAN3Q9UKA8 241 aa20.46■□□□□ 0.87
DDX41-213ENST00000512027 FZD1Q9UP38 647 aa20.46■□□□□ 0.87
DDX41-213ENST00000512027 CRKP46108 304 aa20.45■□□□□ 0.86
DDX41-213ENST00000512027 PRKG1Q13976 671 aa20.45■□□□□ 0.86
DDX41-213ENST00000512027 WBP1LQ9NX94 342 aa20.45■□□□□ 0.86
DDX41-213ENST00000512027 SSC5DA1L4H1 1573 aa20.44■□□□□ 0.86
DDX41-213ENST00000512027 A0A1B0GUL7 405 aa20.44■□□□□ 0.86
DDX41-213ENST00000512027 POLA2Q14181 598 aa20.44■□□□□ 0.86
DDX41-213ENST00000512027 COL13A1Q5TAT6 717 aaPredicted RBP20.44■□□□□ 0.86
DDX41-213ENST00000512027 RGMBQ6NW40 437 aa20.44■□□□□ 0.86
DDX41-213ENST00000512027 TBC1D22AQ8WUA7 517 aa20.44■□□□□ 0.86
DDX41-213ENST00000512027 TDRD3Q9H7E2 651 aaKnown RBP20.44■□□□□ 0.86
DDX41-213ENST00000512027 SERPINA10Q9UK55 444 aa20.44■□□□□ 0.86
DDX41-213ENST00000512027 UBE2Q2LH0YL09 131 aa20.43■□□□□ 0.86
DDX41-213ENST00000512027 ATP8B2P98198 1209 aa20.43■□□□□ 0.86
DDX41-213ENST00000512027 CCDC102BQ68D86 513 aa20.43■□□□□ 0.86
DDX41-213ENST00000512027 DEFB129Q9H1M3 183 aa20.43■□□□□ 0.86
DDX41-213ENST00000512027 FAM155AB1AL88 458 aaPredicted RBP20.42■□□□□ 0.86
DDX41-213ENST00000512027 MYO1BO43795 1136 aa20.42■□□□□ 0.86
DDX41-213ENST00000512027 ZNF157P51786 506 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms