RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 CEP290O15078 2479 aa12.33□□□□□ -0.44
PTPN20-225ENST00000511769 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
PTPN20-225ENST00000511769 KIAA2012Q0VF49 1180 aa12.33□□□□□ -0.44
PTPN20-225ENST00000511769 TTLL12Q14166 644 aaPredicted RBP12.33□□□□□ -0.44
PTPN20-225ENST00000511769 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
PTPN20-225ENST00000511769 NUTM1Q86Y26 1132 aa12.33□□□□□ -0.44
PTPN20-225ENST00000511769 LINS1Q8NG48 757 aa12.33□□□□□ -0.44
PTPN20-225ENST00000511769 RBM17Q96I25 401 aaKnown RBP12.33□□□□□ -0.44
PTPN20-225ENST00000511769 MYD88Q99836 296 aa12.33□□□□□ -0.44
PTPN20-225ENST00000511769 HTATIP2Q9BUP3 242 aa12.33□□□□□ -0.44
PTPN20-225ENST00000511769 HDAC5Q9UQL6 1122 aa12.33□□□□□ -0.44
PTPN20-225ENST00000511769 PSMD14O00487 310 aa12.32□□□□□ -0.44
PTPN20-225ENST00000511769 RWDD1Q9H446 243 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-225ENST00000511769 C9orf78Q9NZ63 289 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-225ENST00000511769 STAP2Q9UGK3 403 aa12.32□□□□□ -0.44
PTPN20-225ENST00000511769 PTCH2Q9Y6C5 1203 aa12.32□□□□□ -0.44
PTPN20-225ENST00000511769 GNAI2P04899 355 aa12.31□□□□□ -0.44
PTPN20-225ENST00000511769 HSP90AB3PQ58FF7 597 aa12.31□□□□□ -0.44
PTPN20-225ENST00000511769 ANGEL2Q5VTE6 544 aaKnown RBP12.31□□□□□ -0.44
PTPN20-225ENST00000511769 DPP8Q6V1X1 898 aaPredicted RBP12.31□□□□□ -0.44
PTPN20-225ENST00000511769 CRAMP1Q96RY5 1269 aa12.31□□□□□ -0.44
PTPN20-225ENST00000511769 RTFDC1Q9BY42 306 aaPredicted RBP12.31□□□□□ -0.44
PTPN20-225ENST00000511769 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
PTPN20-225ENST00000511769 ERVV-1B6SEH8 477 aa12.3□□□□□ -0.44
PTPN20-225ENST00000511769 UBTFL1P0CB47 393 aaPredicted RBP12.3□□□□□ -0.44
PTPN20-225ENST00000511769 CAP1Q01518 475 aa12.3□□□□□ -0.44
PTPN20-225ENST00000511769 SHISA4Q96DD7 197 aa12.3□□□□□ -0.44
PTPN20-225ENST00000511769 MEIS3Q99687 375 aa12.3□□□□□ -0.44
PTPN20-225ENST00000511769 ATP6V0A2Q9Y487 856 aa12.3□□□□□ -0.44
PTPN20-225ENST00000511769 PCDHB15Q9Y5E8 787 aa12.3□□□□□ -0.44
PTPN20-225ENST00000511769 MAP3K15Q6ZN16 1313 aa12.3□□□□□ -0.44
PTPN20-225ENST00000511769 RPTORQ8N122 1335 aa12.3□□□□□ -0.44
PTPN20-225ENST00000511769 NEURL1BA8MQ27 555 aa12.29□□□□□ -0.44
PTPN20-225ENST00000511769 TCIRG1Q13488 830 aa12.29□□□□□ -0.44
PTPN20-225ENST00000511769 CWF19L2Q2TBE0 894 aaKnown RBP12.29□□□□□ -0.44
PTPN20-225ENST00000511769 CENPQQ7L2Z9 268 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-225ENST00000511769 IFNL1Q8IU54 200 aa12.29□□□□□ -0.44
PTPN20-225ENST00000511769 RPAP2Q8IXW5 612 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-225ENST00000511769 USP44Q9H0E7 712 aa12.29□□□□□ -0.44
PTPN20-225ENST00000511769 C1orf115Q9H7X2 142 aa12.29□□□□□ -0.44
PTPN20-225ENST00000511769 ATP5J2-PTCD1G3V325 749 aa12.28□□□□□ -0.44
PTPN20-225ENST00000511769 IGKV5-2P06315 115 aa12.28□□□□□ -0.44
PTPN20-225ENST00000511769 SP3Q02447 781 aa12.28□□□□□ -0.44
PTPN20-225ENST00000511769 GIGYF2Q6Y7W6 1299 aaKnown RBP12.28□□□□□ -0.44
PTPN20-225ENST00000511769 SH3TC2Q8TF17 1288 aa12.28□□□□□ -0.44
PTPN20-225ENST00000511769 NYXQ9GZU5 481 aa12.28□□□□□ -0.44
PTPN20-225ENST00000511769 CWC25Q9NXE8 425 aaPredicted RBP12.28□□□□□ -0.44
PTPN20-225ENST00000511769 SCAF8Q9UPN6 1271 aaKnown RBP12.28□□□□□ -0.44
PTPN20-225ENST00000511769 TMEM265A0A087WTH1 108 aa12.27□□□□□ -0.45
PTPN20-225ENST00000511769 GRM8O00222 908 aa12.27□□□□□ -0.45
PTPN20-225ENST00000511769 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
PTPN20-225ENST00000511769 GCKRQ14397 625 aa12.27□□□□□ -0.45
PTPN20-225ENST00000511769 PRAMEF18Q5VWM3 479 aa12.27□□□□□ -0.45
PTPN20-225ENST00000511769 CCDC191Q8NCU4 936 aa12.27□□□□□ -0.45
PTPN20-225ENST00000511769 IBTKQ9P2D0 1353 aaPredicted RBP12.26□□□□□ -0.45
PTPN20-225ENST00000511769 IGF2BP3O00425 579 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPN20-225ENST00000511769 HMMRO75330 724 aa12.26□□□□□ -0.45
PTPN20-225ENST00000511769 IGHDP01880 384 aa12.26□□□□□ -0.45
PTPN20-225ENST00000511769 NBPF7P0C2Y1 421 aaPredicted RBP12.26□□□□□ -0.45
PTPN20-225ENST00000511769 TRIM28Q13263 835 aaKnown RBP12.26□□□□□ -0.45
PTPN20-225ENST00000511769 CRHR2Q13324 411 aa12.26□□□□□ -0.45
PTPN20-225ENST00000511769 HDAC1Q13547 482 aaPredicted RBP12.26□□□□□ -0.45
PTPN20-225ENST00000511769 SCARF1Q14162 830 aa12.26□□□□□ -0.45
PTPN20-225ENST00000511769 HLFQ16534 295 aa12.26□□□□□ -0.45
PTPN20-225ENST00000511769 SPRYD7Q5W111 196 aa12.26□□□□□ -0.45
PTPN20-225ENST00000511769 SNX27Q96L92 541 aa12.26□□□□□ -0.45
PTPN20-225ENST00000511769 ISCA1Q9BUE6 129 aa12.26□□□□□ -0.45
PTPN20-225ENST00000511769 MANSC4A6NHS7 340 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-225ENST00000511769 PTPN12Q05209 780 aaKnown RBP12.25□□□□□ -0.45
PTPN20-225ENST00000511769 C3orf67Q6ZVT6 689 aa12.25□□□□□ -0.45
PTPN20-225ENST00000511769 ANKRD44Q8N8A2 993 aa12.25□□□□□ -0.45
PTPN20-225ENST00000511769 DBNDD1Q9H9R9 158 aa12.25□□□□□ -0.45
PTPN20-225ENST00000511769 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-225ENST00000511769 LRRFIP2Q9Y608 721 aaKnown RBP12.25□□□□□ -0.45
PTPN20-225ENST00000511769 UTYO14607 1347 aa12.24□□□□□ -0.45
PTPN20-225ENST00000511769 RGL2O15211 777 aa12.24□□□□□ -0.45
PTPN20-225ENST00000511769 EVI5O60447 810 aa12.24□□□□□ -0.45
PTPN20-225ENST00000511769 BCAMP50895 628 aa12.24□□□□□ -0.45
PTPN20-225ENST00000511769 ATP8B2P98198 1209 aa12.24□□□□□ -0.45
PTPN20-225ENST00000511769 CEP85Q6P2H3 762 aa12.24□□□□□ -0.45
PTPN20-225ENST00000511769 SYMPKQ92797 1274 aaKnown RBP12.24□□□□□ -0.45
PTPN20-225ENST00000511769 GABBR2O75899 941 aa12.23□□□□□ -0.45
PTPN20-225ENST00000511769 GPTP24298 496 aa12.23□□□□□ -0.45
PTPN20-225ENST00000511769 INHBEP58166 350 aa12.23□□□□□ -0.45
PTPN20-225ENST00000511769 PRKG1Q13976 671 aa12.23□□□□□ -0.45
PTPN20-225ENST00000511769 LRIT3Q3SXY7 679 aa12.23□□□□□ -0.45
PTPN20-225ENST00000511769 UBE2Q1Q7Z7E8 422 aa12.23□□□□□ -0.45
PTPN20-225ENST00000511769 GUCD1Q96NT3 240 aa12.23□□□□□ -0.45
PTPN20-225ENST00000511769 RTL9Q8NET4 1388 aa12.22□□□□□ -0.45
PTPN20-225ENST00000511769 IRS2Q9Y4H2 1338 aa12.22□□□□□ -0.45
PTPN20-225ENST00000511769 H7C1W4 665 aa12.22□□□□□ -0.45
PTPN20-225ENST00000511769 TNFRSF10AO00220 468 aa12.22□□□□□ -0.45
PTPN20-225ENST00000511769 NF2P35240 595 aa12.22□□□□□ -0.45
PTPN20-225ENST00000511769 ARHGEF6Q15052 776 aa12.22□□□□□ -0.45
PTPN20-225ENST00000511769 MTFR1Q15390 333 aa12.22□□□□□ -0.45
PTPN20-225ENST00000511769 PARP10Q53GL7 1025 aa12.22□□□□□ -0.45
PTPN20-225ENST00000511769 UBE3BQ7Z3V4 1068 aa12.22□□□□□ -0.45
PTPN20-225ENST00000511769 NLRP10Q86W26 655 aa12.22□□□□□ -0.45
PTPN20-225ENST00000511769 ZNF34Q8IZ26 560 aa12.22□□□□□ -0.45
PTPN20-225ENST00000511769 KCNQ5Q9NR82 932 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms