RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 PCDHAC2Q9Y5I4 1007 aa19.3■□□□□ 0.68
COL1A1-213ENST00000511732 SLC10A3P09131 477 aa19.29■□□□□ 0.68
COL1A1-213ENST00000511732 KIF23Q02241 960 aaPredicted RBP19.29■□□□□ 0.68
COL1A1-213ENST00000511732 UBE4AQ14139 1066 aa19.29■□□□□ 0.68
COL1A1-213ENST00000511732 LRRC24Q50LG9 513 aa19.29■□□□□ 0.68
COL1A1-213ENST00000511732 ECM29Q5VYK3 1845 aa19.28■□□□□ 0.68
COL1A1-213ENST00000511732 F8W031 263 aaPredicted RBP19.28■□□□□ 0.68
COL1A1-213ENST00000511732 CA12O43570 354 aa19.28■□□□□ 0.68
COL1A1-213ENST00000511732 GYG1P46976 350 aa19.28■□□□□ 0.68
COL1A1-213ENST00000511732 FKBP1BP68106 108 aa19.28■□□□□ 0.68
COL1A1-213ENST00000511732 RASAL3Q86YV0 1011 aa19.28■□□□□ 0.68
COL1A1-213ENST00000511732 KLHDC4Q8TBB5 520 aa19.28■□□□□ 0.68
COL1A1-213ENST00000511732 FAM84BQ96KN1 310 aaPredicted RBP19.28■□□□□ 0.68
COL1A1-213ENST00000511732 SMC4Q9NTJ3 1288 aa19.28■□□□□ 0.68
COL1A1-213ENST00000511732 CASP8AP2Q9UKL3 1982 aa19.27■□□□□ 0.68
COL1A1-213ENST00000511732 FKBP1AP62942 108 aaKnown RBP19.27■□□□□ 0.68
COL1A1-213ENST00000511732 TDRD7Q8NHU6 1098 aaKnown RBP19.27■□□□□ 0.68
COL1A1-213ENST00000511732 AOX1Q06278 1338 aa19.26■□□□□ 0.67
COL1A1-213ENST00000511732 UBE2Q2LH0YL09 131 aa19.26■□□□□ 0.67
COL1A1-213ENST00000511732 VGLL2Q8N8G2 317 aa19.26■□□□□ 0.67
COL1A1-213ENST00000511732 MTMR14Q8NCE2 650 aa19.26■□□□□ 0.67
COL1A1-213ENST00000511732 FAM205AQ6ZU69 1335 aa19.25■□□□□ 0.67
COL1A1-213ENST00000511732 MROH5Q6ZUA9 1318 aa19.25■□□□□ 0.67
COL1A1-213ENST00000511732 HIBADHP31937 336 aaKnown RBP19.25■□□□□ 0.67
COL1A1-213ENST00000511732 DLGAP5Q15398 846 aa19.25■□□□□ 0.67
COL1A1-213ENST00000511732 CFAP100Q494V2 611 aa19.25■□□□□ 0.67
COL1A1-213ENST00000511732 APOBEC3FQ8IUX4 373 aaKnown RBP19.25■□□□□ 0.67
COL1A1-213ENST00000511732 PRMT6Q96LA8 375 aaPredicted RBP19.25■□□□□ 0.67
COL1A1-213ENST00000511732 CSRNP1Q96S65 589 aa19.25■□□□□ 0.67
COL1A1-213ENST00000511732 AKAP11Q9UKA4 1901 aa19.24■□□□□ 0.67
COL1A1-213ENST00000511732 NOB1Q9ULX3 412 aaKnown RBP19.24■□□□□ 0.67
COL1A1-213ENST00000511732 ARAP2Q8WZ64 1704 aa19.24■□□□□ 0.67
COL1A1-213ENST00000511732 CT47B1P0C2W7 299 aaPredicted RBP19.23■□□□□ 0.67
COL1A1-213ENST00000511732 RFX5P48382 616 aaPredicted RBP19.23■□□□□ 0.67
COL1A1-213ENST00000511732 METTL24Q5JXM2 366 aa19.23■□□□□ 0.67
COL1A1-213ENST00000511732 FBXO33Q7Z6M2 555 aa19.23■□□□□ 0.67
COL1A1-213ENST00000511732 ABHD8Q96I13 439 aa19.23■□□□□ 0.67
COL1A1-213ENST00000511732 RNF186Q9NXI6 227 aa19.23■□□□□ 0.67
COL1A1-213ENST00000511732 FZD1Q9UP38 647 aa19.23■□□□□ 0.67
COL1A1-213ENST00000511732 CLRN2A0PK11 232 aa19.22■□□□□ 0.67
COL1A1-213ENST00000511732 SPDYE2BA6NHP3 402 aa19.22■□□□□ 0.67
COL1A1-213ENST00000511732 PDE8BO95263 885 aa19.22■□□□□ 0.67
COL1A1-213ENST00000511732 SPDYE6P0CI01 402 aa19.22■□□□□ 0.67
COL1A1-213ENST00000511732 PRKG1Q13976 671 aa19.22■□□□□ 0.67
COL1A1-213ENST00000511732 TTLL12Q14166 644 aaPredicted RBP19.22■□□□□ 0.67
COL1A1-213ENST00000511732 MFSD14BQ5SR56 506 aa19.22■□□□□ 0.67
COL1A1-213ENST00000511732 DEFB129Q9H1M3 183 aa19.22■□□□□ 0.67
COL1A1-213ENST00000511732 SSC5DA1L4H1 1573 aa19.21■□□□□ 0.67
COL1A1-213ENST00000511732 TRPA1O75762 1119 aa19.21■□□□□ 0.67
COL1A1-213ENST00000511732 NF2P35240 595 aa19.21■□□□□ 0.67
COL1A1-213ENST00000511732 GRIK5Q16478 980 aa19.21■□□□□ 0.67
COL1A1-213ENST00000511732 SAGE1Q9NXZ1 904 aa19.21■□□□□ 0.67
COL1A1-213ENST00000511732 IQSEC3Q9UPP2 1182 aaPredicted RBP19.21■□□□□ 0.67
COL1A1-213ENST00000511732 COL1A1P02452 1464 aaPredicted RBP19.21■□□□□ 0.67
COL1A1-213ENST00000511732 RARSP54136 660 aaKnown RBP19.2■□□□□ 0.66
COL1A1-213ENST00000511732 PTPN12Q05209 780 aaKnown RBP19.2■□□□□ 0.66
COL1A1-213ENST00000511732 TTF2Q9UNY4 1162 aaKnown RBP19.2■□□□□ 0.66
COL1A1-213ENST00000511732 FGFR2P21802 821 aa19.19■□□□□ 0.66
COL1A1-213ENST00000511732 RBM5P52756 815 aaKnown RBP eCLIP19.19■□□□□ 0.66
COL1A1-213ENST00000511732 EYA2O00167 538 aa19.18■□□□□ 0.66
COL1A1-213ENST00000511732 MYO1BO43795 1136 aa19.18■□□□□ 0.66
COL1A1-213ENST00000511732 BCAMP50895 628 aa19.18■□□□□ 0.66
COL1A1-213ENST00000511732 LDLRAD1Q5T700 205 aa19.18■□□□□ 0.66
COL1A1-213ENST00000511732 ATG9AQ7Z3C6 839 aa19.18■□□□□ 0.66
COL1A1-213ENST00000511732 VPS37DQ86XT2 251 aa19.18■□□□□ 0.66
COL1A1-213ENST00000511732 API5Q9BZZ5 524 aaKnown RBP19.18■□□□□ 0.66
COL1A1-213ENST00000511732 MCOLN1Q9GZU1 580 aa19.18■□□□□ 0.66
COL1A1-213ENST00000511732 VEZTQ9HBM0 779 aa19.18■□□□□ 0.66
COL1A1-213ENST00000511732 ANGEL1Q9UNK9 670 aaKnown RBP19.18■□□□□ 0.66
COL1A1-213ENST00000511732 UBTFL1P0CB47 393 aaPredicted RBP19.17■□□□□ 0.66
COL1A1-213ENST00000511732 MKRN3Q13064 507 aaKnown RBP19.17■□□□□ 0.66
COL1A1-213ENST00000511732 CHAF1AQ13111 956 aaPredicted RBP19.17■□□□□ 0.66
COL1A1-213ENST00000511732 CAVIN4Q5BKX8 364 aa19.17■□□□□ 0.66
COL1A1-213ENST00000511732 ARMC9Q7Z3E5 817 aa19.17■□□□□ 0.66
COL1A1-213ENST00000511732 REM2Q8IYK8 340 aaPredicted RBP19.17■□□□□ 0.66
COL1A1-213ENST00000511732 SERPINA10Q9UK55 444 aa19.17■□□□□ 0.66
COL1A1-213ENST00000511732 PPP2R3BQ9Y5P8 575 aa19.17■□□□□ 0.66
COL1A1-213ENST00000511732 PUM3Q15397 648 aaKnown RBP19.16■□□□□ 0.66
COL1A1-213ENST00000511732 NBPF12Q5TAG4 269 aaPredicted RBP19.16■□□□□ 0.66
COL1A1-213ENST00000511732 MEIS3Q99687 375 aa19.16■□□□□ 0.66
COL1A1-213ENST00000511732 TDRD3Q9H7E2 651 aaKnown RBP19.16■□□□□ 0.66
COL1A1-213ENST00000511732 LRRFIP2Q9Y608 721 aaKnown RBP19.16■□□□□ 0.66
COL1A1-213ENST00000511732 CRKP46108 304 aa19.15■□□□□ 0.66
COL1A1-213ENST00000511732 RASA3Q14644 834 aa19.15■□□□□ 0.66
COL1A1-213ENST00000511732 MAP3K11Q16584 847 aa19.15■□□□□ 0.66
COL1A1-213ENST00000511732 SPDYE2Q495Y8 402 aa19.15■□□□□ 0.66
COL1A1-213ENST00000511732 DZIP1LQ8IYY4 767 aaKnown RBP19.15■□□□□ 0.66
COL1A1-213ENST00000511732 ZNF70Q9UC06 446 aaPredicted RBP19.15■□□□□ 0.66
COL1A1-213ENST00000511732 MYH13Q9UKX3 1938 aa19.14■□□□□ 0.65
COL1A1-213ENST00000511732 TM4SF4P48230 202 aa19.14■□□□□ 0.65
COL1A1-213ENST00000511732 DGKZQ13574 1117 aa19.14■□□□□ 0.65
COL1A1-213ENST00000511732 SIL1Q9H173 461 aa19.14■□□□□ 0.65
COL1A1-213ENST00000511732 TNNQ9UQP3 1299 aa19.14■□□□□ 0.65
COL1A1-213ENST00000511732 KIF16BQ96L93 1317 aa19.14■□□□□ 0.65
COL1A1-213ENST00000511732 FRAT2O75474 233 aaPredicted RBP19.13■□□□□ 0.65
COL1A1-213ENST00000511732 IFIT1P09914 478 aaKnown RBP19.13■□□□□ 0.65
COL1A1-213ENST00000511732 CDAN1Q8IWY9 1227 aa19.13■□□□□ 0.65
COL1A1-213ENST00000511732 LPIN2Q92539 896 aa19.13■□□□□ 0.65
COL1A1-213ENST00000511732 ARHGAP45Q92619 1136 aa19.13■□□□□ 0.65
COL1A1-213ENST00000511732 CLMNQ96JQ2 1002 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms