RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.91□□□□□ -0.98
CHD1-206ENST00000511067 METTL12A8MUP2 240 aa8.9□□□□□ -0.98
CHD1-206ENST00000511067 CELA2BP08218 269 aaPredicted RBP8.9□□□□□ -0.98
CHD1-206ENST00000511067 ALAS2P22557 587 aa8.9□□□□□ -0.98
CHD1-206ENST00000511067 SMG9Q9H0W8 520 aaKnown RBP8.9□□□□□ -0.98
CHD1-206ENST00000511067 ENAMQ9NRM1 1142 aa8.9□□□□□ -0.98
CHD1-206ENST00000511067 CLEC4MQ9H2X3 399 aaPredicted RBP8.89□□□□□ -0.99
CHD1-206ENST00000511067 SRA1Q9HD15 236 aaKnown RBP8.89□□□□□ -0.99
CHD1-206ENST00000511067 SOX13Q9UN79 622 aa8.89□□□□□ -0.99
CHD1-206ENST00000511067 FAM177BA6PVY3 158 aa8.88□□□□□ -0.99
CHD1-206ENST00000511067 EPXP11678 715 aa8.88□□□□□ -0.99
CHD1-206ENST00000511067 ZNF394Q53GI3 561 aa8.88□□□□□ -0.99
CHD1-206ENST00000511067 PSAPL1Q6NUJ1 521 aa8.88□□□□□ -0.99
CHD1-206ENST00000511067 KANK3Q6NY19 840 aa8.88□□□□□ -0.99
CHD1-206ENST00000511067 SLC43A3Q8NBI5 491 aa8.88□□□□□ -0.99
CHD1-206ENST00000511067 SREK1Q8WXA9 508 aaKnown RBP8.88□□□□□ -0.99
CHD1-206ENST00000511067 TINF2Q9BSI4 451 aa8.88□□□□□ -0.99
CHD1-206ENST00000511067 MUC3BQ9H195 1237 aa8.88□□□□□ -0.99
CHD1-206ENST00000511067 RACK1P63244 317 aaKnown RBP8.87□□□□□ -0.99
CHD1-206ENST00000511067 GNL2Q13823 731 aaKnown RBP8.87□□□□□ -0.99
CHD1-206ENST00000511067 SF3A1Q15459 793 aaKnown RBP8.87□□□□□ -0.99
CHD1-206ENST00000511067 TPTE2Q6XPS3 522 aa8.87□□□□□ -0.99
CHD1-206ENST00000511067 NECAB3Q96P71 396 aaPredicted RBP8.87□□□□□ -0.99
CHD1-206ENST00000511067 SEC31BQ9NQW1 1179 aa8.87□□□□□ -0.99
CHD1-206ENST00000511067 LRRC4BQ9NT99 713 aa8.87□□□□□ -0.99
CHD1-206ENST00000511067 PCDHGB7Q9Y5F8 929 aa8.87□□□□□ -0.99
CHD1-206ENST00000511067 ENC1O14682 589 aa8.86□□□□□ -0.99
CHD1-206ENST00000511067 FBXO24O75426 580 aa8.86□□□□□ -0.99
CHD1-206ENST00000511067 RGS9O75916 674 aaPredicted RBP8.86□□□□□ -0.99
CHD1-206ENST00000511067 RELL1Q8IUW5 271 aa8.86□□□□□ -0.99
CHD1-206ENST00000511067 TMEM151AQ8N4L1 468 aa8.86□□□□□ -0.99
CHD1-206ENST00000511067 SCARF2Q96GP6 870 aaPredicted RBP8.86□□□□□ -0.99
CHD1-206ENST00000511067 ACBD3Q9H3P7 528 aa8.86□□□□□ -0.99
CHD1-206ENST00000511067 KBTBD4Q9NVX7 518 aa8.86□□□□□ -0.99
CHD1-206ENST00000511067 TRIM33Q9UPN9 1127 aa8.86□□□□□ -0.99
CHD1-206ENST00000511067 GDF11O95390 407 aa8.85□□□□□ -0.99
CHD1-206ENST00000511067 B3GALT4O96024 378 aa8.85□□□□□ -0.99
CHD1-206ENST00000511067 BCRP11274 1271 aa8.85□□□□□ -0.99
CHD1-206ENST00000511067 CDC27P30260 824 aa8.85□□□□□ -0.99
CHD1-206ENST00000511067 RASSF7Q02833 373 aa8.85□□□□□ -0.99
CHD1-206ENST00000511067 PPP2R3AQ06190 1150 aa8.85□□□□□ -0.99
CHD1-206ENST00000511067 PCDH1Q08174 1060 aa8.85□□□□□ -0.99
CHD1-206ENST00000511067 VN1R5Q7Z5H4 357 aa8.85□□□□□ -0.99
CHD1-206ENST00000511067 ACDQ96AP0 544 aa8.85□□□□□ -0.99
CHD1-206ENST00000511067 TMEM74Q96NL1 305 aa8.85□□□□□ -0.99
CHD1-206ENST00000511067 TMEM39AQ9NV64 488 aa8.85□□□□□ -0.99
CHD1-206ENST00000511067 GPN3Q9UHW5 284 aaPredicted RBP8.85□□□□□ -0.99
CHD1-206ENST00000511067 EIF4EBP3O60516 100 aaPredicted RBP8.84□□□□□ -0.99
CHD1-206ENST00000511067 CELA3AP09093 270 aa8.84□□□□□ -0.99
CHD1-206ENST00000511067 LIG3P49916 1009 aa8.84□□□□□ -0.99
CHD1-206ENST00000511067 CABP4P57796 275 aa8.84□□□□□ -0.99
CHD1-206ENST00000511067 RPS26P62854 115 aaKnown RBP8.84□□□□□ -0.99
CHD1-206ENST00000511067 FAAP100Q0VG06 881 aa8.84□□□□□ -0.99
CHD1-206ENST00000511067 C20orf204Q6ZNR8 217 aa8.84□□□□□ -0.99
CHD1-206ENST00000511067 NEDD1Q8NHV4 660 aa8.84□□□□□ -0.99
CHD1-206ENST00000511067 LACRTQ9GZZ8 138 aa8.84□□□□□ -0.99
CHD1-206ENST00000511067 CAPN10Q9HC96 672 aa8.84□□□□□ -0.99
CHD1-206ENST00000511067 COPRSQ9NQ92 184 aa8.84□□□□□ -0.99
CHD1-206ENST00000511067 STARD13Q9Y3M8 1113 aa8.84□□□□□ -0.99
CHD1-206ENST00000511067 SAMM50Q9Y512 469 aa8.84□□□□□ -0.99
CHD1-206ENST00000511067 IGSF3O75054 1194 aa8.83□□□□□ -1
CHD1-206ENST00000511067 GJA8P48165 433 aa8.83□□□□□ -1
CHD1-206ENST00000511067 GSK3AP49840 483 aa8.83□□□□□ -1
CHD1-206ENST00000511067 ADAMTSL4Q6UY14 1074 aa8.83□□□□□ -1
CHD1-206ENST00000511067 PHC3Q8NDX5 983 aa8.83□□□□□ -1
CHD1-206ENST00000511067 RHOVQ96L33 236 aa8.83□□□□□ -1
CHD1-206ENST00000511067 DRC1Q96MC2 740 aa8.83□□□□□ -1
CHD1-206ENST00000511067 TRIM56Q9BRZ2 755 aaKnown RBP8.83□□□□□ -1
CHD1-206ENST00000511067 INPP5FQ9Y2H2 1132 aa8.83□□□□□ -1
CHD1-206ENST00000511067 H3BRJ5 948 aa8.82□□□□□ -1
CHD1-206ENST00000511067 OIP5O43482 229 aa8.82□□□□□ -1
CHD1-206ENST00000511067 ESRRAP11474 423 aaPredicted RBP8.82□□□□□ -1
CHD1-206ENST00000511067 GBP2P32456 591 aaPredicted RBP8.82□□□□□ -1
CHD1-206ENST00000511067 GRIK5Q16478 980 aa8.82□□□□□ -1
CHD1-206ENST00000511067 GDF6Q6KF10 455 aaPredicted RBP8.82□□□□□ -1
CHD1-206ENST00000511067 AGMOQ6ZNB7 445 aa8.82□□□□□ -1
CHD1-206ENST00000511067 DDX54Q8TDD1 881 aaKnown RBP8.82□□□□□ -1
CHD1-206ENST00000511067 EDARADDQ8WWZ3 215 aa8.82□□□□□ -1
CHD1-206ENST00000511067 SOX17Q9H6I2 414 aaPredicted RBP8.82□□□□□ -1
CHD1-206ENST00000511067 JPH1Q9HDC5 661 aaPredicted RBP8.82□□□□□ -1
CHD1-206ENST00000511067 PRDM6Q9NQX0 595 aa8.82□□□□□ -1
CHD1-206ENST00000511067 KCNQ5Q9NR82 932 aa8.82□□□□□ -1
CHD1-206ENST00000511067 USP35Q9P2H5 1018 aa8.82□□□□□ -1
CHD1-206ENST00000511067 LILRB5O75023 590 aa8.81□□□□□ -1
CHD1-206ENST00000511067 ALBP02768 609 aa8.81□□□□□ -1
CHD1-206ENST00000511067 IKBKEQ14164 716 aa8.81□□□□□ -1
CHD1-206ENST00000511067 ZNF423Q2M1K9 1284 aa8.81□□□□□ -1
CHD1-206ENST00000511067 TTBK2Q6IQ55 1244 aa8.81□□□□□ -1
CHD1-206ENST00000511067 KIAA0825Q8IV33 1275 aa8.81□□□□□ -1
CHD1-206ENST00000511067 NUDT8Q8WV74 236 aa8.81□□□□□ -1
CHD1-206ENST00000511067 WNT8BQ93098 351 aa8.81□□□□□ -1
CHD1-206ENST00000511067 SPATA32Q96LK8 384 aa8.81□□□□□ -1
CHD1-206ENST00000511067 GMLQ99445 158 aa8.81□□□□□ -1
CHD1-206ENST00000511067 EPHA1P21709 976 aa8.8□□□□□ -1
CHD1-206ENST00000511067 NME2P22392 152 aa8.8□□□□□ -1
CHD1-206ENST00000511067 EIF4A3P38919 411 aaKnown RBP8.8□□□□□ -1
CHD1-206ENST00000511067 TNNI2P48788 182 aa8.8□□□□□ -1
CHD1-206ENST00000511067 AFF1P51825 1210 aaKnown RBP8.8□□□□□ -1
CHD1-206ENST00000511067 LMNB2Q03252 620 aa8.8□□□□□ -1
CHD1-206ENST00000511067 PCNX4Q63HM2 1172 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms