RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 ARMC5Q96C12 935 aa7.09□□□□□ -1.27
MBD4-209ENST00000511009 GPRASP2Q96D09 838 aa7.09□□□□□ -1.27
MBD4-209ENST00000511009 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.09□□□□□ -1.27
MBD4-209ENST00000511009 ZKSCAN3Q9BRR0 538 aa7.09□□□□□ -1.27
MBD4-209ENST00000511009 PRR12Q9ULL5 1215 aa7.09□□□□□ -1.27
MBD4-209ENST00000511009 MINDY4BA8MYZ0 360 aa7.08□□□□□ -1.28
MBD4-209ENST00000511009 GNB5O14775 395 aa7.08□□□□□ -1.28
MBD4-209ENST00000511009 KIF4AO95239 1232 aa7.08□□□□□ -1.28
MBD4-209ENST00000511009 MAP3K6O95382 1288 aa7.08□□□□□ -1.28
MBD4-209ENST00000511009 RLBP1P12271 317 aa7.08□□□□□ -1.28
MBD4-209ENST00000511009 GBP2P32456 591 aaPredicted RBP7.08□□□□□ -1.28
MBD4-209ENST00000511009 GPAT2Q6NUI2 795 aa7.08□□□□□ -1.28
MBD4-209ENST00000511009 C20orf204Q6ZNR8 217 aa7.08□□□□□ -1.28
MBD4-209ENST00000511009 DHX32Q7L7V1 743 aaKnown RBP7.08□□□□□ -1.28
MBD4-209ENST00000511009 DPH6Q7L8W6 267 aa7.08□□□□□ -1.28
MBD4-209ENST00000511009 NSUN5Q96P11 429 aaKnown RBP7.08□□□□□ -1.28
MBD4-209ENST00000511009 SPON2Q9BUD6 331 aa7.08□□□□□ -1.28
MBD4-209ENST00000511009 RSRP1Q9BUV0 290 aa7.08□□□□□ -1.28
MBD4-209ENST00000511009 RRAGCQ9HB90 399 aa7.08□□□□□ -1.28
MBD4-209ENST00000511009 ABCB6Q9NP58 842 aa7.08□□□□□ -1.28
MBD4-209ENST00000511009 FBXO24O75426 580 aa7.07□□□□□ -1.28
MBD4-209ENST00000511009 STK10O94804 968 aaKnown RBP7.07□□□□□ -1.28
MBD4-209ENST00000511009 AMPD1P23109 780 aa7.07□□□□□ -1.28
MBD4-209ENST00000511009 GJA8P48165 433 aa7.07□□□□□ -1.28
MBD4-209ENST00000511009 MAP3K11Q16584 847 aa7.07□□□□□ -1.28
MBD4-209ENST00000511009 COL13A1Q5TAT6 717 aaPredicted RBP7.07□□□□□ -1.28
MBD4-209ENST00000511009 TPTE2Q6XPS3 522 aa7.07□□□□□ -1.28
MBD4-209ENST00000511009 ILDR2Q71H61 639 aa7.07□□□□□ -1.28
MBD4-209ENST00000511009 ALYREFQ86V81 257 aaKnown RBP7.07□□□□□ -1.28
MBD4-209ENST00000511009 CCNJLQ8IV13 435 aa7.07□□□□□ -1.28
MBD4-209ENST00000511009 KIAA0825Q8IV33 1275 aa7.07□□□□□ -1.28
MBD4-209ENST00000511009 FAM177A1Q8N128 213 aaPredicted RBP7.07□□□□□ -1.28
MBD4-209ENST00000511009 PMFBP1Q8TBY8 1022 aa7.07□□□□□ -1.28
MBD4-209ENST00000511009 TCF12Q99081 682 aa7.07□□□□□ -1.28
MBD4-209ENST00000511009 SPOCK3Q9BQ16 436 aa7.07□□□□□ -1.28
MBD4-209ENST00000511009 PRDM6Q9NQX0 595 aa7.07□□□□□ -1.28
MBD4-209ENST00000511009 F6X3S4 739 aa7.06□□□□□ -1.28
MBD4-209ENST00000511009 ACPPP15309 386 aa7.06□□□□□ -1.28
MBD4-209ENST00000511009 SV2BQ7L1I2 683 aa7.06□□□□□ -1.28
MBD4-209ENST00000511009 CEP44Q9C0F1 390 aa7.06□□□□□ -1.28
MBD4-209ENST00000511009 RBSNQ9H1K0 784 aa7.06□□□□□ -1.28
MBD4-209ENST00000511009 IGFLR1Q9H665 355 aa7.06□□□□□ -1.28
MBD4-209ENST00000511009 LOC100996750A0A140TA64 210 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 SMARCA5O60264 1052 aaPredicted RBP7.05□□□□□ -1.28
MBD4-209ENST00000511009 TRPA1O75762 1119 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 GHRHP01286 108 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 ALBP02768 609 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 HOXD8P13378 290 aaPredicted RBP7.05□□□□□ -1.28
MBD4-209ENST00000511009 ATF4P18848 351 aaPredicted RBP7.05□□□□□ -1.28
MBD4-209ENST00000511009 NRLP54845 237 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 TBC1D8BQ0IIM8 1120 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 SOGA3Q5TF21 947 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 CEP120Q8N960 986 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 ASAP3Q8TDY4 903 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 SPATA32Q96LK8 384 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 TMEM74Q96NL1 305 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 TRIM56Q9BRZ2 755 aaKnown RBP7.05□□□□□ -1.28
MBD4-209ENST00000511009 HIRIP3Q9BW71 556 aaPredicted RBP7.05□□□□□ -1.28
MBD4-209ENST00000511009 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 LNPKQ9C0E8 428 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 DZANK1Q9NVP4 752 aa7.05□□□□□ -1.28
MBD4-209ENST00000511009 SSBP05455 408 aaKnown RBP eCLIP7.04□□□□□ -1.28
MBD4-209ENST00000511009 EIF4A3P38919 411 aaKnown RBP7.04□□□□□ -1.28
MBD4-209ENST00000511009 ADH7P40394 386 aa7.04□□□□□ -1.28
MBD4-209ENST00000511009 GRIA4P48058 902 aa7.04□□□□□ -1.28
MBD4-209ENST00000511009 MLLT1Q03111 559 aaPredicted RBP7.04□□□□□ -1.28
MBD4-209ENST00000511009 PCSK7Q16549 785 aa7.04□□□□□ -1.28
MBD4-209ENST00000511009 MCF2L2Q86YR7 1114 aa7.04□□□□□ -1.28
MBD4-209ENST00000511009 MICALL1Q8N3F8 863 aa7.04□□□□□ -1.28
MBD4-209ENST00000511009 ANKRD24Q8TF21 1146 aa7.04□□□□□ -1.28
MBD4-209ENST00000511009 UBE2OQ9C0C9 1292 aaKnown RBP7.04□□□□□ -1.28
MBD4-209ENST00000511009 GPN3Q9UHW5 284 aaPredicted RBP7.04□□□□□ -1.28
MBD4-209ENST00000511009 A0A096LPE4 126 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 LOC102724428A0A0B4J2F2 783 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 A0A1W2PPZ6 126 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 METTL12A8MUP2 240 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 PDE2AO00408 941 aaPredicted RBP7.03□□□□□ -1.28
MBD4-209ENST00000511009 HMGB1P09429 215 aaKnown RBP7.03□□□□□ -1.28
MBD4-209ENST00000511009 FGRP09769 529 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 NID1P14543 1247 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 LMNB1P20700 586 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 CANXP27824 592 aaKnown RBP7.03□□□□□ -1.28
MBD4-209ENST00000511009 SIK1P57059 783 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 GPLD1P80108 840 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 SUZ12Q15022 739 aaKnown RBP7.03□□□□□ -1.28
MBD4-209ENST00000511009 SPRED3Q2MJR0 410 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 C8orf86Q6ZUL3 223 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 HFE2Q6ZVN8 426 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 TMEM102Q8N9M5 508 aaPredicted RBP7.03□□□□□ -1.28
MBD4-209ENST00000511009 RASGRP4Q8TDF6 673 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 BHLHE41Q9C0J9 482 aaPredicted RBP7.03□□□□□ -1.28
MBD4-209ENST00000511009 ADAMTS1Q9UHI8 967 aa7.03□□□□□ -1.28
MBD4-209ENST00000511009 J3QW42 95 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 MSTNO14793 375 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 CELA3AP09093 270 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 EIF2AK2P19525 551 aaKnown RBP7.02□□□□□ -1.29
MBD4-209ENST00000511009 ITPKAP23677 461 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 LIG3P49916 1009 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 SNAP47Q5SQN1 464 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 CD163Q86VB7 1156 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms