RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 METTL24Q5JXM2 366 aa19.31■□□□□ 0.68
SH3TC1-220ENST00000511002 CDC37L1Q7L3B6 337 aa19.31■□□□□ 0.68
SH3TC1-220ENST00000511002 ZNF804AQ7Z570 1209 aa19.31■□□□□ 0.68
SH3TC1-220ENST00000511002 ABT1Q9ULW3 272 aaKnown RBP19.31■□□□□ 0.68
SH3TC1-220ENST00000511002 SCAF8Q9UPN6 1271 aaKnown RBP19.31■□□□□ 0.68
SH3TC1-220ENST00000511002 RASSF10A6NK89 507 aa19.3■□□□□ 0.68
SH3TC1-220ENST00000511002 VEGFBP49765 207 aa19.3■□□□□ 0.68
SH3TC1-220ENST00000511002 SCARF1Q14162 830 aa19.3■□□□□ 0.68
SH3TC1-220ENST00000511002 POLA2Q14181 598 aa19.3■□□□□ 0.68
SH3TC1-220ENST00000511002 KRT26Q7Z3Y9 468 aa19.3■□□□□ 0.68
SH3TC1-220ENST00000511002 KIAA0825Q8IV33 1275 aa19.3■□□□□ 0.68
SH3TC1-220ENST00000511002 FAM84BQ96KN1 310 aaPredicted RBP19.3■□□□□ 0.68
SH3TC1-220ENST00000511002 SIL1Q9H173 461 aa19.3■□□□□ 0.68
SH3TC1-220ENST00000511002 ZNF408Q9H9D4 720 aa19.3■□□□□ 0.68
SH3TC1-220ENST00000511002 EYA2O00167 538 aa19.29■□□□□ 0.68
SH3TC1-220ENST00000511002 NBPF9Q3BBW0 867 aa19.29■□□□□ 0.68
SH3TC1-220ENST00000511002 ANGEL2Q5VTE6 544 aaKnown RBP19.29■□□□□ 0.68
SH3TC1-220ENST00000511002 ATG9AQ7Z3C6 839 aa19.29■□□□□ 0.68
SH3TC1-220ENST00000511002 SIRT2Q8IXJ6 389 aa19.29■□□□□ 0.68
SH3TC1-220ENST00000511002 SSH3Q8TE77 659 aa19.29■□□□□ 0.68
SH3TC1-220ENST00000511002 COPRSQ9NQ92 184 aa19.29■□□□□ 0.68
SH3TC1-220ENST00000511002 PDE8BO95263 885 aa19.28■□□□□ 0.68
SH3TC1-220ENST00000511002 TDRD7Q8NHU6 1098 aaKnown RBP19.28■□□□□ 0.68
SH3TC1-220ENST00000511002 DCPSQ96C86 337 aaKnown RBP19.28■□□□□ 0.68
SH3TC1-220ENST00000511002 PCDHAC2Q9Y5I4 1007 aa19.28■□□□□ 0.68
SH3TC1-220ENST00000511002 MYO3BQ8WXR4 1341 aa19.27■□□□□ 0.68
SH3TC1-220ENST00000511002 SASH1O94885 1247 aa19.27■□□□□ 0.68
SH3TC1-220ENST00000511002 FGFR2P21802 821 aa19.27■□□□□ 0.68
SH3TC1-220ENST00000511002 HIBADHP31937 336 aaKnown RBP19.27■□□□□ 0.68
SH3TC1-220ENST00000511002 DEFB115Q30KQ5 88 aa19.27■□□□□ 0.68
SH3TC1-220ENST00000511002 RPAP2Q8IXW5 612 aaPredicted RBP19.27■□□□□ 0.68
SH3TC1-220ENST00000511002 IQSEC3Q9UPP2 1182 aaPredicted RBP19.27■□□□□ 0.68
SH3TC1-220ENST00000511002 PCDHB15Q9Y5E8 787 aa19.27■□□□□ 0.68
SH3TC1-220ENST00000511002 TLL2Q9Y6L7 1015 aa19.27■□□□□ 0.68
SH3TC1-220ENST00000511002 PCNTO95613 3336 aa19.27■□□□□ 0.68
SH3TC1-220ENST00000511002 F8W031 263 aaPredicted RBP19.26■□□□□ 0.67
SH3TC1-220ENST00000511002 WNT10BO00744 389 aa19.26■□□□□ 0.67
SH3TC1-220ENST00000511002 FBXO33Q7Z6M2 555 aa19.26■□□□□ 0.67
SH3TC1-220ENST00000511002 CIAO1O76071 339 aa19.25■□□□□ 0.67
SH3TC1-220ENST00000511002 HSPA1AP0DMV8 641 aaKnown RBP19.25■□□□□ 0.67
SH3TC1-220ENST00000511002 HSPA1BP0DMV9 641 aaKnown RBP19.25■□□□□ 0.67
SH3TC1-220ENST00000511002 CYP4F22Q6NT55 531 aa19.25■□□□□ 0.67
SH3TC1-220ENST00000511002 SAPCD2Q86UD0 394 aa19.25■□□□□ 0.67
SH3TC1-220ENST00000511002 ZBED3Q96IU2 234 aaPredicted RBP19.25■□□□□ 0.67
SH3TC1-220ENST00000511002 AOX1Q06278 1338 aa19.25■□□□□ 0.67
SH3TC1-220ENST00000511002 FAM205AQ6ZU69 1335 aa19.25■□□□□ 0.67
SH3TC1-220ENST00000511002 BCAMP50895 628 aa19.24■□□□□ 0.67
SH3TC1-220ENST00000511002 GRIK5Q16478 980 aa19.24■□□□□ 0.67
SH3TC1-220ENST00000511002 SULF1Q8IWU6 871 aa19.24■□□□□ 0.67
SH3TC1-220ENST00000511002 OGFOD1Q8N543 542 aa19.24■□□□□ 0.67
SH3TC1-220ENST00000511002 ARAP2Q8WZ64 1704 aa19.24■□□□□ 0.67
SH3TC1-220ENST00000511002 GRM1Q13255 1194 aa19.23■□□□□ 0.67
SH3TC1-220ENST00000511002 PUM3Q15397 648 aaKnown RBP19.23■□□□□ 0.67
SH3TC1-220ENST00000511002 PRAMEF18Q5VWM3 479 aa19.23■□□□□ 0.67
SH3TC1-220ENST00000511002 CDCA5Q96FF9 252 aa19.23■□□□□ 0.67
SH3TC1-220ENST00000511002 FBXO3Q9UK99 471 aa19.23■□□□□ 0.67
SH3TC1-220ENST00000511002 WDR33Q9C0J8 1336 aaKnown RBP19.23■□□□□ 0.67
SH3TC1-220ENST00000511002 HMMRO75330 724 aa19.22■□□□□ 0.67
SH3TC1-220ENST00000511002 SURF6O75683 361 aaKnown RBP19.22■□□□□ 0.67
SH3TC1-220ENST00000511002 IL15P40933 162 aaPredicted RBP19.22■□□□□ 0.67
SH3TC1-220ENST00000511002 PAXIP1Q6ZW49 1069 aaPredicted RBP19.22■□□□□ 0.67
SH3TC1-220ENST00000511002 CAPNS2Q96L46 248 aa19.22■□□□□ 0.67
SH3TC1-220ENST00000511002 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.22■□□□□ 0.67
SH3TC1-220ENST00000511002 THSD7BQ9C0I4 1608 aa19.22■□□□□ 0.67
SH3TC1-220ENST00000511002 FKBP1AP62942 108 aaKnown RBP19.21■□□□□ 0.67
SH3TC1-220ENST00000511002 CHAF1AQ13111 956 aaPredicted RBP19.21■□□□□ 0.67
SH3TC1-220ENST00000511002 MFSD14BQ5SR56 506 aa19.21■□□□□ 0.67
SH3TC1-220ENST00000511002 HDAC9Q9UKV0 1011 aa19.21■□□□□ 0.67
SH3TC1-220ENST00000511002 EXOC6BQ9Y2D4 811 aa19.21■□□□□ 0.67
SH3TC1-220ENST00000511002 NOP58Q9Y2X3 529 aaKnown RBP19.21■□□□□ 0.67
SH3TC1-220ENST00000511002 COL1A1P02452 1464 aaPredicted RBP19.21■□□□□ 0.67
SH3TC1-220ENST00000511002 PITPNM2Q9BZ72 1349 aa19.21■□□□□ 0.67
SH3TC1-220ENST00000511002 ECM29Q5VYK3 1845 aa19.21■□□□□ 0.67
SH3TC1-220ENST00000511002 MYH13Q9UKX3 1938 aa19.2■□□□□ 0.66
SH3TC1-220ENST00000511002 IFIT1P09914 478 aaKnown RBP19.2■□□□□ 0.66
SH3TC1-220ENST00000511002 G3BP1Q13283 466 aaKnown RBP eCLIP19.2■□□□□ 0.66
SH3TC1-220ENST00000511002 OS9Q13438 667 aaPredicted RBP19.2■□□□□ 0.66
SH3TC1-220ENST00000511002 AAMPQ13685 434 aa19.2■□□□□ 0.66
SH3TC1-220ENST00000511002 CFAP100Q494V2 611 aa19.2■□□□□ 0.66
SH3TC1-220ENST00000511002 VPS37DQ86XT2 251 aa19.2■□□□□ 0.66
SH3TC1-220ENST00000511002 GBA2Q9HCG7 927 aaPredicted RBP19.2■□□□□ 0.66
SH3TC1-220ENST00000511002 AOC2O75106 756 aa19.19■□□□□ 0.66
SH3TC1-220ENST00000511002 SLC5A1P13866 664 aa19.19■□□□□ 0.66
SH3TC1-220ENST00000511002 TFCP2Q12800 502 aa19.19■□□□□ 0.66
SH3TC1-220ENST00000511002 ATP2B3Q16720 1220 aa19.19■□□□□ 0.66
SH3TC1-220ENST00000511002 CAVIN4Q5BKX8 364 aa19.19■□□□□ 0.66
SH3TC1-220ENST00000511002 LPIN2Q92539 896 aa19.19■□□□□ 0.66
SH3TC1-220ENST00000511002 CEP126Q9P2H0 1117 aa19.19■□□□□ 0.66
SH3TC1-220ENST00000511002 ADORA1P30542 326 aa19.18■□□□□ 0.66
SH3TC1-220ENST00000511002 HUNKP57058 714 aa19.18■□□□□ 0.66
SH3TC1-220ENST00000511002 DLGAP5Q15398 846 aa19.18■□□□□ 0.66
SH3TC1-220ENST00000511002 MOB2Q70IA6 237 aa19.18■□□□□ 0.66
SH3TC1-220ENST00000511002 PRMT6Q96LA8 375 aaPredicted RBP19.18■□□□□ 0.66
SH3TC1-220ENST00000511002 ZIC5Q96T25 663 aa19.18■□□□□ 0.66
SH3TC1-220ENST00000511002 CLRN2A0PK11 232 aa19.17■□□□□ 0.66
SH3TC1-220ENST00000511002 FOXN1O15353 648 aa19.17■□□□□ 0.66
SH3TC1-220ENST00000511002 MTMR14Q8NCE2 650 aa19.17■□□□□ 0.66
SH3TC1-220ENST00000511002 TTF2Q9UNY4 1162 aaKnown RBP19.17■□□□□ 0.66
SH3TC1-220ENST00000511002 SPDYE2BA6NHP3 402 aa19.16■□□□□ 0.66
SH3TC1-220ENST00000511002 APBB1O00213 710 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms