RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 HIBADHP31937 336 aaKnown RBP22.52■■□□□ 1.2
TPM3-220ENST00000509601 LBX1P52954 281 aa22.52■■□□□ 1.2
TPM3-220ENST00000509601 FKBP1AP62942 108 aaKnown RBP22.52■■□□□ 1.2
TPM3-220ENST00000509601 PRAMEF18Q5VWM3 479 aa22.52■■□□□ 1.2
TPM3-220ENST00000509601 RGMBQ6NW40 437 aa22.52■■□□□ 1.2
TPM3-220ENST00000509601 TNS4Q8IZW8 715 aa22.52■■□□□ 1.2
TPM3-220ENST00000509601 VGLL2Q8N8G2 317 aa22.52■■□□□ 1.2
TPM3-220ENST00000509601 JAG2Q9Y219 1238 aa22.52■■□□□ 1.2
TPM3-220ENST00000509601 FAM155AB1AL88 458 aaPredicted RBP22.51■■□□□ 1.19
TPM3-220ENST00000509601 FBXO33Q7Z6M2 555 aa22.51■■□□□ 1.19
TPM3-220ENST00000509601 FAM205AQ6ZU69 1335 aa22.51■■□□□ 1.19
TPM3-220ENST00000509601 THSD7BQ9C0I4 1608 aa22.5■■□□□ 1.19
TPM3-220ENST00000509601 PDE8BO95263 885 aa22.5■■□□□ 1.19
TPM3-220ENST00000509601 PTPN12Q05209 780 aaKnown RBP22.5■■□□□ 1.19
TPM3-220ENST00000509601 MTMR14Q8NCE2 650 aa22.5■■□□□ 1.19
TPM3-220ENST00000509601 ARHGAP45Q92619 1136 aa22.5■■□□□ 1.19
TPM3-220ENST00000509601 PCDHAC2Q9Y5I4 1007 aa22.5■■□□□ 1.19
TPM3-220ENST00000509601 METTL24Q5JXM2 366 aa22.49■■□□□ 1.19
TPM3-220ENST00000509601 F8W031 263 aaPredicted RBP22.48■■□□□ 1.19
TPM3-220ENST00000509601 UBTFL1P0CB47 393 aaPredicted RBP22.48■■□□□ 1.19
TPM3-220ENST00000509601 NOGQ13253 232 aa22.48■■□□□ 1.19
TPM3-220ENST00000509601 EYA2O00167 538 aa22.47■■□□□ 1.19
TPM3-220ENST00000509601 FGFR2P21802 821 aa22.47■■□□□ 1.19
TPM3-220ENST00000509601 ZNF157P51786 506 aaPredicted RBP22.47■■□□□ 1.19
TPM3-220ENST00000509601 DLGAP5Q15398 846 aa22.47■■□□□ 1.19
TPM3-220ENST00000509601 INTS3Q68E01 1043 aaKnown RBP22.47■■□□□ 1.19
TPM3-220ENST00000509601 MOB2Q70IA6 237 aa22.47■■□□□ 1.19
TPM3-220ENST00000509601 CCDC102AQ96A19 550 aa22.47■■□□□ 1.19
TPM3-220ENST00000509601 PRMT6Q96LA8 375 aaPredicted RBP22.47■■□□□ 1.19
TPM3-220ENST00000509601 BCAR3O75815 825 aa22.46■■□□□ 1.19
TPM3-220ENST00000509601 FKBP1BP68106 108 aa22.46■■□□□ 1.19
TPM3-220ENST00000509601 CFAP100Q494V2 611 aa22.46■■□□□ 1.19
TPM3-220ENST00000509601 ATG9AQ7Z3C6 839 aa22.46■■□□□ 1.19
TPM3-220ENST00000509601 BEGAINQ9BUH8 593 aa22.46■■□□□ 1.19
TPM3-220ENST00000509601 MEIS3Q99687 375 aa22.45■■□□□ 1.18
TPM3-220ENST00000509601 LRRFIP2Q9Y608 721 aaKnown RBP22.45■■□□□ 1.18
TPM3-220ENST00000509601 AOX1Q06278 1338 aa22.45■■□□□ 1.18
TPM3-220ENST00000509601 UBE2Q2LH0YL09 131 aa22.44■■□□□ 1.18
TPM3-220ENST00000509601 BCAMP50895 628 aa22.44■■□□□ 1.18
TPM3-220ENST00000509601 HNRNPUQ00839 825 aaKnown RBP eCLIP22.44■■□□□ 1.18
TPM3-220ENST00000509601 KIF23Q02241 960 aaPredicted RBP22.44■■□□□ 1.18
TPM3-220ENST00000509601 MFSD14BQ5SR56 506 aa22.44■■□□□ 1.18
TPM3-220ENST00000509601 IQSEC3Q9UPP2 1182 aaPredicted RBP22.44■■□□□ 1.18
TPM3-220ENST00000509601 TNNQ9UQP3 1299 aa22.44■■□□□ 1.18
TPM3-220ENST00000509601 KIF16BQ96L93 1317 aa22.43■■□□□ 1.18
TPM3-220ENST00000509601 SPDYE2BA6NHP3 402 aa22.43■■□□□ 1.18
TPM3-220ENST00000509601 SLC10A3P09131 477 aa22.43■■□□□ 1.18
TPM3-220ENST00000509601 SPDYE6P0CI01 402 aa22.43■■□□□ 1.18
TPM3-220ENST00000509601 GRIK5Q16478 980 aa22.43■■□□□ 1.18
TPM3-220ENST00000509601 APOBEC3FQ8IUX4 373 aaKnown RBP22.43■■□□□ 1.18
TPM3-220ENST00000509601 TSKSQ9UJT2 592 aa22.43■■□□□ 1.18
TPM3-220ENST00000509601 CAVIN4Q5BKX8 364 aa22.42■■□□□ 1.18
TPM3-220ENST00000509601 VPS37DQ86XT2 251 aa22.42■■□□□ 1.18
TPM3-220ENST00000509601 DEFB129Q9H1M3 183 aa22.42■■□□□ 1.18
TPM3-220ENST00000509601 TTF2Q9UNY4 1162 aaKnown RBP22.42■■□□□ 1.18
TPM3-220ENST00000509601 IPO8O15397 1037 aaKnown RBP22.41■■□□□ 1.18
TPM3-220ENST00000509601 TRIM27P14373 513 aa22.41■■□□□ 1.18
TPM3-220ENST00000509601 PUM3Q15397 648 aaKnown RBP22.41■■□□□ 1.18
TPM3-220ENST00000509601 CSRNP1Q96S65 589 aa22.41■■□□□ 1.18
TPM3-220ENST00000509601 FBXO3Q9UK99 471 aa22.41■■□□□ 1.18
TPM3-220ENST00000509601 HDAC5Q9UQL6 1122 aa22.41■■□□□ 1.18
TPM3-220ENST00000509601 CLRN2A0PK11 232 aa22.4■■□□□ 1.18
TPM3-220ENST00000509601 CA12O43570 354 aa22.4■■□□□ 1.18
TPM3-220ENST00000509601 CIAO1O76071 339 aa22.4■■□□□ 1.18
TPM3-220ENST00000509601 ATF7IPQ6VMQ6 1270 aa22.4■■□□□ 1.18
TPM3-220ENST00000509601 RASAL3Q86YV0 1011 aa22.4■■□□□ 1.18
TPM3-220ENST00000509601 SIL1Q9H173 461 aa22.4■■□□□ 1.18
TPM3-220ENST00000509601 PA2G4Q9UQ80 394 aaKnown RBP22.4■■□□□ 1.18
TPM3-220ENST00000509601 IFIT1P09914 478 aaKnown RBP22.39■■□□□ 1.17
TPM3-220ENST00000509601 RBM5P52756 815 aaKnown RBP eCLIP22.39■■□□□ 1.17
TPM3-220ENST00000509601 LPIN2Q92539 896 aa22.39■■□□□ 1.17
TPM3-220ENST00000509601 COPRSQ9NQ92 184 aa22.39■■□□□ 1.17
TPM3-220ENST00000509601 SERPINA10Q9UK55 444 aa22.39■■□□□ 1.17
TPM3-220ENST00000509601 PAPPA2Q9BXP8 1791 aa22.39■■□□□ 1.17
TPM3-220ENST00000509601 CHAF1AQ13111 956 aaPredicted RBP22.38■■□□□ 1.17
TPM3-220ENST00000509601 TTLL12Q14166 644 aaPredicted RBP22.38■■□□□ 1.17
TPM3-220ENST00000509601 FRAT1Q92837 279 aaPredicted RBP22.38■■□□□ 1.17
TPM3-220ENST00000509601 MYO1BO43795 1136 aa22.37■■□□□ 1.17
TPM3-220ENST00000509601 GNAI3P08754 354 aa22.37■■□□□ 1.17
TPM3-220ENST00000509601 NF2P35240 595 aa22.37■■□□□ 1.17
TPM3-220ENST00000509601 PRKG1Q13976 671 aa22.37■■□□□ 1.17
TPM3-220ENST00000509601 LDLRAD1Q5T700 205 aa22.37■■□□□ 1.17
TPM3-220ENST00000509601 TBC1D22AQ8WUA7 517 aa22.37■■□□□ 1.17
TPM3-220ENST00000509601 CEP126Q9P2H0 1117 aa22.37■■□□□ 1.17
TPM3-220ENST00000509601 FZD1Q9UP38 647 aa22.37■■□□□ 1.17
TPM3-220ENST00000509601 FRAT2O75474 233 aaPredicted RBP22.36■■□□□ 1.17
TPM3-220ENST00000509601 CAPN15O75808 1086 aa22.36■■□□□ 1.17
TPM3-220ENST00000509601 SLC5A1P13866 664 aa22.36■■□□□ 1.17
TPM3-220ENST00000509601 CRKP46108 304 aa22.36■■□□□ 1.17
TPM3-220ENST00000509601 DZIP1LQ8IYY4 767 aaKnown RBP22.36■■□□□ 1.17
TPM3-220ENST00000509601 CLUAP1Q96AJ1 413 aa22.36■■□□□ 1.17
TPM3-220ENST00000509601 TDRD3Q9H7E2 651 aaKnown RBP22.36■■□□□ 1.17
TPM3-220ENST00000509601 VEZTQ9HBM0 779 aa22.36■■□□□ 1.17
TPM3-220ENST00000509601 RNF186Q9NXI6 227 aa22.36■■□□□ 1.17
TPM3-220ENST00000509601 ZNF70Q9UC06 446 aaPredicted RBP22.36■■□□□ 1.17
TPM3-220ENST00000509601 IL15P40933 162 aaPredicted RBP22.35■■□□□ 1.17
TPM3-220ENST00000509601 HDLBPQ00341 1268 aaKnown RBP22.35■■□□□ 1.17
TPM3-220ENST00000509601 MTX1Q13505 466 aa22.35■■□□□ 1.17
TPM3-220ENST00000509601 SPDYE2Q495Y8 402 aa22.35■■□□□ 1.17
TPM3-220ENST00000509601 NBPF12Q5TAG4 269 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms