RNA–Protein interactions for RNA: ENST00000509587.1

MBD4-207, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-207ENST00000509587 FBXW7Q969H0 707 aa21.47■■□□□ 1.03
MBD4-207ENST00000509587 DBNDD2Q9BQY9 259 aa21.47■■□□□ 1.03
MBD4-207ENST00000509587 TAF1DQ9H5J8 278 aaPredicted RBP21.47■■□□□ 1.03
MBD4-207ENST00000509587 GNL3LQ9NVN8 582 aaKnown RBP21.47■■□□□ 1.03
MBD4-207ENST00000509587 DBNLQ9UJU6 430 aaKnown RBP21.47■■□□□ 1.03
MBD4-207ENST00000509587 ZNF646O15015 1829 aaPredicted RBP21.47■■□□□ 1.03
MBD4-207ENST00000509587 MYO3BQ8WXR4 1341 aa21.47■■□□□ 1.03
MBD4-207ENST00000509587 SEMA3EO15041 775 aa21.46■■□□□ 1.03
MBD4-207ENST00000509587 CNOT7Q9UIV1 285 aaKnown RBP21.46■■□□□ 1.03
MBD4-207ENST00000509587 JAG2Q9Y219 1238 aa21.46■■□□□ 1.03
MBD4-207ENST00000509587 SCN4AP35499 1836 aa21.45■■□□□ 1.03
MBD4-207ENST00000509587 SHTN1A0MZ66 631 aa21.45■■□□□ 1.02
MBD4-207ENST00000509587 FRAT2O75474 233 aaPredicted RBP21.45■■□□□ 1.02
MBD4-207ENST00000509587 EPHX2P34913 555 aa21.45■■□□□ 1.02
MBD4-207ENST00000509587 AACSQ86V21 672 aa21.45■■□□□ 1.02
MBD4-207ENST00000509587 MICALL2Q8IY33 904 aa21.45■■□□□ 1.02
MBD4-207ENST00000509587 CLASRPQ8N2M8 674 aaKnown RBP21.45■■□□□ 1.02
MBD4-207ENST00000509587 LRRCC1Q9C099 1032 aa21.45■■□□□ 1.02
MBD4-207ENST00000509587 CCDC8Q9H0W5 538 aaPredicted RBP21.45■■□□□ 1.02
MBD4-207ENST00000509587 TLR7Q9NYK1 1049 aaKnown RBP21.45■■□□□ 1.02
MBD4-207ENST00000509587 ZNF280AP59817 542 aaPredicted RBP21.44■■□□□ 1.02
MBD4-207ENST00000509587 GORABQ5T7V8 394 aa21.44■■□□□ 1.02
MBD4-207ENST00000509587 RWDD1Q9H446 243 aaPredicted RBP21.44■■□□□ 1.02
MBD4-207ENST00000509587 COL1A1P02452 1464 aaPredicted RBP21.44■■□□□ 1.02
MBD4-207ENST00000509587 H7C1D1 291 aa21.43■■□□□ 1.02
MBD4-207ENST00000509587 USP17L8P0C7I0 530 aa21.43■■□□□ 1.02
MBD4-207ENST00000509587 ARID4AP29374 1257 aaPredicted RBP21.43■■□□□ 1.02
MBD4-207ENST00000509587 CHAF1AQ13111 956 aaPredicted RBP21.43■■□□□ 1.02
MBD4-207ENST00000509587 RASGRF1Q13972 1273 aa21.43■■□□□ 1.02
MBD4-207ENST00000509587 MFSD14BQ5SR56 506 aa21.43■■□□□ 1.02
MBD4-207ENST00000509587 ADARB2Q9NS39 739 aaKnown RBP21.43■■□□□ 1.02
MBD4-207ENST00000509587 DENND2AQ9ULE3 1009 aa21.43■■□□□ 1.02
MBD4-207ENST00000509587 SMARCA5O60264 1052 aaPredicted RBP21.42■■□□□ 1.02
MBD4-207ENST00000509587 IGHDP01880 384 aa21.42■■□□□ 1.02
MBD4-207ENST00000509587 PDS5AQ29RF7 1337 aaKnown RBP21.42■■□□□ 1.02
MBD4-207ENST00000509587 CCDC158Q5M9N0 1113 aa21.42■■□□□ 1.02
MBD4-207ENST00000509587 PNMA8AQ86V59 439 aaPredicted RBP21.42■■□□□ 1.02
MBD4-207ENST00000509587 TBC1D22AQ8WUA7 517 aa21.42■■□□□ 1.02
MBD4-207ENST00000509587 GCC1Q96CN9 775 aa21.42■■□□□ 1.02
MBD4-207ENST00000509587 ZNF512BQ96KM6 892 aaPredicted RBP21.42■■□□□ 1.02
MBD4-207ENST00000509587 UQCRFS1P1P0C7P4 283 aa21.41■■□□□ 1.02
MBD4-207ENST00000509587 MMP14P50281 582 aa21.41■■□□□ 1.02
MBD4-207ENST00000509587 USP50Q70EL3 339 aaPredicted RBP21.41■■□□□ 1.02
MBD4-207ENST00000509587 KIAA0825Q8IV33 1275 aa21.41■■□□□ 1.02
MBD4-207ENST00000509587 WDR66Q8TBY9 1149 aa21.41■■□□□ 1.02
MBD4-207ENST00000509587 EGFRP00533 1210 aa21.4■■□□□ 1.02
MBD4-207ENST00000509587 SCARF1Q14162 830 aa21.4■■□□□ 1.02
MBD4-207ENST00000509587 GRIK5Q16478 980 aa21.4■■□□□ 1.02
MBD4-207ENST00000509587 SAMD7Q7Z3H4 446 aa21.4■■□□□ 1.02
MBD4-207ENST00000509587 HMG20BQ9P0W2 317 aa21.4■■□□□ 1.02
MBD4-207ENST00000509587 SALL1Q9NSC2 1324 aa21.39■■□□□ 1.01
MBD4-207ENST00000509587 TOMM70O94826 608 aa21.39■■□□□ 1.01
MBD4-207ENST00000509587 IFIT2P09913 472 aaKnown RBP21.39■■□□□ 1.01
MBD4-207ENST00000509587 POTEIP0CG38 1075 aa21.39■■□□□ 1.01
MBD4-207ENST00000509587 POTEJP0CG39 1038 aa21.39■■□□□ 1.01
MBD4-207ENST00000509587 MCAMP43121 646 aa21.39■■□□□ 1.01
MBD4-207ENST00000509587 HIRAP54198 1017 aaPredicted RBP21.39■■□□□ 1.01
MBD4-207ENST00000509587 TTC39AQ5SRH9 613 aa21.39■■□□□ 1.01
MBD4-207ENST00000509587 SMC5Q8IY18 1101 aa21.39■■□□□ 1.01
MBD4-207ENST00000509587 OGFOD1Q8N543 542 aa21.39■■□□□ 1.01
MBD4-207ENST00000509587 TRPM4Q8TD43 1214 aa21.39■■□□□ 1.01
MBD4-207ENST00000509587 SUGT1Q9Y2Z0 365 aa21.39■■□□□ 1.01
MBD4-207ENST00000509587 C16orf71Q8IYS4 520 aaPredicted RBP21.38■■□□□ 1.01
MBD4-207ENST00000509587 SPATA5Q8NB90 893 aa21.38■■□□□ 1.01
MBD4-207ENST00000509587 MYOZ2Q9NPC6 264 aa21.38■■□□□ 1.01
MBD4-207ENST00000509587 F8W031 263 aaPredicted RBP21.37■■□□□ 1.01
MBD4-207ENST00000509587 TBC1D10BQ4KMP7 808 aaPredicted RBP21.37■■□□□ 1.01
MBD4-207ENST00000509587 EAPPQ56P03 285 aaPredicted RBP21.37■■□□□ 1.01
MBD4-207ENST00000509587 PI16Q6UXB8 463 aa21.37■■□□□ 1.01
MBD4-207ENST00000509587 LDHDQ86WU2 507 aa21.37■■□□□ 1.01
MBD4-207ENST00000509587 RBM46Q8TBY0 533 aaKnown RBP21.37■■□□□ 1.01
MBD4-207ENST00000509587 HDAC9Q9UKV0 1011 aa21.37■■□□□ 1.01
MBD4-207ENST00000509587 KIF4BQ2VIQ3 1234 aa21.36■■□□□ 1.01
MBD4-207ENST00000509587 RBM26Q5T8P6 1007 aaKnown RBP21.36■■□□□ 1.01
MBD4-207ENST00000509587 BCL11AQ9H165 835 aa21.36■■□□□ 1.01
MBD4-207ENST00000509587 PGAP2Q9UHJ9 254 aa21.36■■□□□ 1.01
MBD4-207ENST00000509587 TTF2Q9UNY4 1162 aaKnown RBP21.36■■□□□ 1.01
MBD4-207ENST00000509587 ADAMTSL1Q8N6G6 1762 aa21.36■■□□□ 1.01
MBD4-207ENST00000509587 ANKRD45Q5TZF3 282 aa21.35■■□□□ 1.01
MBD4-207ENST00000509587 ZC3H15Q8WU90 426 aaKnown RBP21.35■■□□□ 1.01
MBD4-207ENST00000509587 ZBED3Q96IU2 234 aaPredicted RBP21.35■■□□□ 1.01
MBD4-207ENST00000509587 PRDX5P30044 214 aa21.34■■□□□ 1.01
MBD4-207ENST00000509587 ZGPATQ8N5A5 531 aaKnown RBP21.34■■□□□ 1.01
MBD4-207ENST00000509587 MTMR14Q8NCE2 650 aa21.34■■□□□ 1.01
MBD4-207ENST00000509587 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.34■■□□□ 1.01
MBD4-207ENST00000509587 MRIQ9BWK5 157 aa21.34■■□□□ 1.01
MBD4-207ENST00000509587 SNRKQ9NRH2 765 aa21.34■■□□□ 1.01
MBD4-207ENST00000509587 HDLBPQ00341 1268 aaKnown RBP21.33■■□□□ 1.01
MBD4-207ENST00000509587 CHADLQ6NUI6 762 aa21.33■■□□□ 1.01
MBD4-207ENST00000509587 SMC1BQ8NDV3 1235 aa21.33■■□□□ 1.01
MBD4-207ENST00000509587 SERPINA10Q9UK55 444 aa21.33■■□□□ 1.01
MBD4-207ENST00000509587 WNT10BO00744 389 aa21.32■■□□□ 1
MBD4-207ENST00000509587 CYP2E1P05181 493 aaPredicted RBP21.32■■□□□ 1
MBD4-207ENST00000509587 LDHBP07195 334 aaKnown RBP21.32■■□□□ 1
MBD4-207ENST00000509587 ATP5JP18859 108 aa21.32■■□□□ 1
MBD4-207ENST00000509587 ZAP70P43403 619 aa21.32■■□□□ 1
MBD4-207ENST00000509587 CFAP100Q494V2 611 aa21.32■■□□□ 1
MBD4-207ENST00000509587 TBC1D9Q6ZT07 1266 aa21.32■■□□□ 1
MBD4-207ENST00000509587 CLEC11AQ9Y240 323 aa21.32■■□□□ 1
MBD4-207ENST00000509587 MAST3O60307 1309 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms