RNA–Protein interactions for RNA: ENST00000509405.5

LINC00461-210, long intergenic non-protein coding RNA 461, human

TSL 4

Gene LINC00461, Length 511 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00461-210	ENST00000509405	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.25	□□□□□ -0.61
LINC00461-210	ENST00000509405	EDC3	Q96F86	508 aa	Known RBP	11.25	□□□□□ -0.61
LINC00461-210	ENST00000509405	PPP1R9B	Q96SB3	815 aa		11.25	□□□□□ -0.61
LINC00461-210	ENST00000509405	PUS3	Q9BZE2	481 aa	Known RBP	11.25	□□□□□ -0.61
LINC00461-210	ENST00000509405	NACAP1	Q9BZK3	213 aa		11.25	□□□□□ -0.61
LINC00461-210	ENST00000509405	MAST3	O60307	1309 aa		11.25	□□□□□ -0.61
LINC00461-210	ENST00000509405	ZMYM6	O95789	1325 aa		11.25	□□□□□ -0.61
LINC00461-210	ENST00000509405		E7EWF7	191 aa		11.24	□□□□□ -0.61
LINC00461-210	ENST00000509405	APBA3	O96018	575 aa		11.24	□□□□□ -0.61
LINC00461-210	ENST00000509405	EVC	P57679	992 aa		11.24	□□□□□ -0.61
LINC00461-210	ENST00000509405	INTS5	Q6P9B9	1019 aa	Known RBP	11.24	□□□□□ -0.61
LINC00461-210	ENST00000509405	MTA3	Q9BTC8	594 aa		11.24	□□□□□ -0.61
LINC00461-210	ENST00000509405	CNNM2	Q9H8M5	875 aa		11.24	□□□□□ -0.61
LINC00461-210	ENST00000509405	CPA1	P15085	419 aa		11.23	□□□□□ -0.61
LINC00461-210	ENST00000509405	ADD2	P35612	726 aa		11.23	□□□□□ -0.61
LINC00461-210	ENST00000509405	SLC9C2	Q5TAH2	1124 aa		11.23	□□□□□ -0.61
LINC00461-210	ENST00000509405	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.23	□□□□□ -0.61
LINC00461-210	ENST00000509405	MARCH10	Q8NA82	808 aa	Predicted RBP	11.23	□□□□□ -0.61
LINC00461-210	ENST00000509405	BRF1	Q92994	677 aa		11.23	□□□□□ -0.61
LINC00461-210	ENST00000509405	AIDA	Q96BJ3	306 aa		11.23	□□□□□ -0.61
LINC00461-210	ENST00000509405	SLC4A9	Q96Q91	983 aa		11.23	□□□□□ -0.61
LINC00461-210	ENST00000509405	DDX19A	Q9NUU7	478 aa	Known RBP	11.23	□□□□□ -0.61
LINC00461-210	ENST00000509405	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
LINC00461-210	ENST00000509405	CNTNAP4	Q9C0A0	1308 aa		11.23	□□□□□ -0.61
LINC00461-210	ENST00000509405	TOGARAM1	Q9Y4F4	1720 aa		11.23	□□□□□ -0.61
LINC00461-210	ENST00000509405	SYCE3	A1L190	88 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	CTAGE5	O15320	804 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	CAMTA2	O94983	1202 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	ZAP70	P43403	619 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	SART3	Q15020	963 aa	Known RBP	11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	CCDC102B	Q68D86	513 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	CCDC129	Q6ZRS4	1044 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	GAS2L3	Q86XJ1	694 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	TMTC2	Q8N394	836 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	VGLL2	Q8N8G2	317 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	NECAB1	Q8N987	351 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	SPATA5	Q8NB90	893 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	SMARCC2	Q8TAQ2	1214 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	OSBP2	Q969R2	916 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	TMEM87B	Q96K49	555 aa		11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	SEC62	Q99442	399 aa	Known RBP	11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	RNF41	Q9H4P4	317 aa	Predicted RBP	11.22	□□□□□ -0.61
LINC00461-210	ENST00000509405	TJP1	Q07157	1748 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	CPLX1	O14810	134 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	SEMA3E	O15041	775 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	ZBTB22	O15209	634 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	GPAA1	O43292	621 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	FIBP	O43427	364 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	LARGE1	O95461	756 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	FGA	P02671	866 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	CCDC192	P0DO97	292 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	PC	P11498	1178 aa	Known RBP	11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	FGFR2	P21802	821 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	GTF2E1	P29083	439 aa	Predicted RBP	11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	ADORA1	P30542	326 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	DNM1	Q05193	864 aa	Known RBP	11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	UBE4A	Q14139	1066 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	CAVIN4	Q5BKX8	364 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	SUSD4	Q5VX71	490 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	SYNE3	Q6ZMZ3	975 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	ANKRD18A	Q8IVF6	992 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	SPATA32	Q96LK8	384 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	KRT23	Q9C075	422 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	TMEM63C	Q9P1W3	806 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	CCDC39	Q9UFE4	941 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	CNPY2	Q9Y2B0	182 aa		11.21	□□□□□ -0.61
LINC00461-210	ENST00000509405	UBN2	Q6ZU65	1347 aa		11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	PATL2	C9JE40	543 aa	Known RBP	11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405		M0R2C6	588 aa		11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	IDH1	O75874	414 aa	Known RBP	11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	APP	P05067	770 aa		11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	TPM3	P06753	285 aa		11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	MSN	P26038	577 aa	Known RBP	11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	MCAM	P43121	646 aa		11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	R3HDM1	Q15032	1099 aa	Known RBP	11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	PPP2R5B	Q15173	497 aa		11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	SF3B3	Q15393	1217 aa	Known RBP	11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	SLC10A5	Q5PT55	438 aa		11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	WASF1	Q92558	559 aa		11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	ANKRD2	Q9GZV1	360 aa		11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	ITGB4	P16144	1822 aa		11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	CIC	Q96RK0	1608 aa	Predicted RBP	11.2	□□□□□ -0.62
LINC00461-210	ENST00000509405	RIC1	Q4ADV7	1423 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	CCDC196	A0A1B0GTZ2	297 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	ESPN	B1AK53	854 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	PRC1	O43663	620 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	ZPR1	O75312	459 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	NTSR2	O95665	410 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	PDE6A	P16499	860 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	PDIA3	P30101	505 aa	Known RBP	11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	CLCN1	P35523	988 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	RCAN1	P53805	252 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	STK3	Q13188	491 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	PTF1A	Q7RTS3	328 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	BRAP	Q7Z569	592 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	ACSBG1	Q96GR2	724 aa		11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	LARP6	Q9BRS8	491 aa	Known RBP	11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	BSDC1	Q9NW68	430 aa	Predicted RBP	11.19	□□□□□ -0.62
LINC00461-210	ENST00000509405	DENND2A	Q9ULE3	1009 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms