RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 CHRNDQ07001 517 aa13.12□□□□□ -0.31
COPS4-207ENST00000509317 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
COPS4-207ENST00000509317 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
COPS4-207ENST00000509317 PRMT6Q96LA8 375 aaPredicted RBP13.12□□□□□ -0.31
COPS4-207ENST00000509317 CD209Q9NNX6 404 aa13.12□□□□□ -0.31
COPS4-207ENST00000509317 LEMD3Q9Y2U8 911 aa13.12□□□□□ -0.31
COPS4-207ENST00000509317 H7C1W4 665 aa13.11□□□□□ -0.31
COPS4-207ENST00000509317 KCNJ4P48050 445 aa13.11□□□□□ -0.31
COPS4-207ENST00000509317 GNAI1P63096 354 aa13.11□□□□□ -0.31
COPS4-207ENST00000509317 CFAP100Q494V2 611 aa13.11□□□□□ -0.31
COPS4-207ENST00000509317 CCDC30Q5VVM6 783 aa13.11□□□□□ -0.31
COPS4-207ENST00000509317 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
COPS4-207ENST00000509317 EFCC1Q9HA90 598 aa13.11□□□□□ -0.31
COPS4-207ENST00000509317 IRS2Q9Y4H2 1338 aa13.11□□□□□ -0.31
COPS4-207ENST00000509317 KIAA0100Q14667 2235 aaKnown RBP13.11□□□□□ -0.31
COPS4-207ENST00000509317 PPP1R12BO60237 982 aaPredicted RBP13.1□□□□□ -0.31
COPS4-207ENST00000509317 USP2O75604 605 aaPredicted RBP13.1□□□□□ -0.31
COPS4-207ENST00000509317 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
COPS4-207ENST00000509317 ZBTB48P10074 688 aaPredicted RBP13.1□□□□□ -0.31
COPS4-207ENST00000509317 MAP3K11Q16584 847 aa13.1□□□□□ -0.31
COPS4-207ENST00000509317 INTS3Q68E01 1043 aaKnown RBP13.1□□□□□ -0.31
COPS4-207ENST00000509317 ARMC5Q96C12 935 aa13.1□□□□□ -0.31
COPS4-207ENST00000509317 ERO1AQ96HE7 468 aa13.1□□□□□ -0.31
COPS4-207ENST00000509317 MPHOSPH8Q99549 860 aa13.1□□□□□ -0.31
COPS4-207ENST00000509317 ELP3Q9H9T3 547 aa13.1□□□□□ -0.31
COPS4-207ENST00000509317 COLQQ9Y215 455 aaPredicted RBP13.1□□□□□ -0.31
COPS4-207ENST00000509317 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
COPS4-207ENST00000509317 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
COPS4-207ENST00000509317 CASP7P55210 303 aa13.09□□□□□ -0.31
COPS4-207ENST00000509317 INHBEP58166 350 aa13.09□□□□□ -0.31
COPS4-207ENST00000509317 NEXNQ0ZGT2 675 aa13.09□□□□□ -0.31
COPS4-207ENST00000509317 RASA3Q14644 834 aa13.09□□□□□ -0.31
COPS4-207ENST00000509317 ANKRD2Q9GZV1 360 aa13.09□□□□□ -0.31
COPS4-207ENST00000509317 PTCH2Q9Y6C5 1203 aa13.09□□□□□ -0.31
COPS4-207ENST00000509317 RANBP2P49792 3224 aaKnown RBP13.09□□□□□ -0.31
COPS4-207ENST00000509317 RBM5P52756 815 aaKnown RBP eCLIP13.08□□□□□ -0.32
COPS4-207ENST00000509317 SP3Q02447 781 aa13.08□□□□□ -0.32
COPS4-207ENST00000509317 GCKRQ14397 625 aa13.08□□□□□ -0.32
COPS4-207ENST00000509317 OPTNQ96CV9 577 aa13.08□□□□□ -0.32
COPS4-207ENST00000509317 ZNF333Q96JL9 665 aa13.08□□□□□ -0.32
COPS4-207ENST00000509317 COL1A1P02452 1464 aaPredicted RBP13.08□□□□□ -0.32
COPS4-207ENST00000509317 PLIN1O60240 522 aa13.07□□□□□ -0.32
COPS4-207ENST00000509317 CSF1RP07333 972 aa13.07□□□□□ -0.32
COPS4-207ENST00000509317 IREB2P48200 963 aaKnown RBP13.07□□□□□ -0.32
COPS4-207ENST00000509317 SUPT20HL1Q3ZLR7 823 aa13.07□□□□□ -0.32
COPS4-207ENST00000509317 MTMR14Q8NCE2 650 aa13.07□□□□□ -0.32
COPS4-207ENST00000509317 BRI3BPQ8WY22 251 aa13.07□□□□□ -0.32
COPS4-207ENST00000509317 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
COPS4-207ENST00000509317 ARHGAP39Q9C0H5 1083 aa13.07□□□□□ -0.32
COPS4-207ENST00000509317 H0YGN5 161 aa13.06□□□□□ -0.32
COPS4-207ENST00000509317 SLC4A2P04920 1241 aa13.06□□□□□ -0.32
COPS4-207ENST00000509317 FAM43AQ8N2R8 423 aa13.06□□□□□ -0.32
COPS4-207ENST00000509317 SH3TC2Q8TF17 1288 aa13.06□□□□□ -0.32
COPS4-207ENST00000509317 ZNF594Q96JF6 807 aaPredicted RBP13.06□□□□□ -0.32
COPS4-207ENST00000509317 PLA2G12BQ9BX93 195 aa13.06□□□□□ -0.32
COPS4-207ENST00000509317 STK31Q9BXU1 1019 aa13.06□□□□□ -0.32
COPS4-207ENST00000509317 CHMP3Q9Y3E7 222 aa13.06□□□□□ -0.32
COPS4-207ENST00000509317 PPP2R3BQ9Y5P8 575 aa13.06□□□□□ -0.32
COPS4-207ENST00000509317 CEP290O15078 2479 aa13.05□□□□□ -0.32
COPS4-207ENST00000509317 TRIOBPQ9H2D6 2365 aa13.05□□□□□ -0.32
COPS4-207ENST00000509317 TESPA1A2RU30 521 aaPredicted RBP13.05□□□□□ -0.32
COPS4-207ENST00000509317 MYO1BO43795 1136 aa13.05□□□□□ -0.32
COPS4-207ENST00000509317 IL1R1P14778 569 aa13.05□□□□□ -0.32
COPS4-207ENST00000509317 MMP14P50281 582 aa13.05□□□□□ -0.32
COPS4-207ENST00000509317 SLC4A8Q2Y0W8 1093 aa13.05□□□□□ -0.32
COPS4-207ENST00000509317 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
COPS4-207ENST00000509317 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.05□□□□□ -0.32
COPS4-207ENST00000509317 ANKRD13AQ8IZ07 590 aa13.05□□□□□ -0.32
COPS4-207ENST00000509317 TMEM106CQ9BVX2 250 aa13.05□□□□□ -0.32
COPS4-207ENST00000509317 TMEM39BQ9GZU3 492 aa13.05□□□□□ -0.32
COPS4-207ENST00000509317 TDRD3Q9H7E2 651 aaKnown RBP13.05□□□□□ -0.32
COPS4-207ENST00000509317 ZNF70Q9UC06 446 aaPredicted RBP13.05□□□□□ -0.32
COPS4-207ENST00000509317 MYH3P11055 1940 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 CCL15-CCL14A0A0B4J2E2 113 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 ANKRD18BA2A2Z9 1011 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 TCP10L2B9ZVM9 353 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 FOXO4P98177 505 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 CALD1Q05682 793 aaKnown RBP13.04□□□□□ -0.32
COPS4-207ENST00000509317 VGLL4Q14135 290 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 TAF1CQ15572 869 aaPredicted RBP13.04□□□□□ -0.32
COPS4-207ENST00000509317 GRIK5Q16478 980 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 CCL15Q16663 113 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 EPHA10Q5JZY3 1008 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 OTUD7BQ6GQQ9 843 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 ZNF804AQ7Z570 1209 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 OTUD5Q96G74 571 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 TEPSINQ96N21 525 aa13.04□□□□□ -0.32
COPS4-207ENST00000509317 CACNB3P54284 484 aa13.03□□□□□ -0.32
COPS4-207ENST00000509317 FLIIQ13045 1269 aa13.03□□□□□ -0.32
COPS4-207ENST00000509317 FKBP5Q13451 457 aaPredicted RBP13.03□□□□□ -0.32
COPS4-207ENST00000509317 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
COPS4-207ENST00000509317 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
COPS4-207ENST00000509317 ZSWIM8A7E2V4 1837 aa13.03□□□□□ -0.32
COPS4-207ENST00000509317 OTOFQ9HC10 1997 aa13.03□□□□□ -0.32
COPS4-207ENST00000509317 RBBP6Q7Z6E9 1792 aaKnown RBP13.02□□□□□ -0.32
COPS4-207ENST00000509317 F6X3S4 739 aa13.02□□□□□ -0.33
COPS4-207ENST00000509317 GYG1P46976 350 aa13.02□□□□□ -0.33
COPS4-207ENST00000509317 IFIT5Q13325 482 aaKnown RBP13.02□□□□□ -0.33
COPS4-207ENST00000509317 C15orf52Q6ZUT6 534 aaKnown RBP13.02□□□□□ -0.33
COPS4-207ENST00000509317 DNAAF4Q8WXU2 420 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms