RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 SASH1O94885 1247 aa13.8□□□□□ -0.2
RNF4-212ENST00000509258 KCNJ4P48050 445 aa13.8□□□□□ -0.2
RNF4-212ENST00000509258 MOB2Q70IA6 237 aa13.8□□□□□ -0.2
RNF4-212ENST00000509258 APOBEC3FQ8IUX4 373 aaKnown RBP13.8□□□□□ -0.2
RNF4-212ENST00000509258 CERS5Q8N5B7 392 aa13.8□□□□□ -0.2
RNF4-212ENST00000509258 HDAC9Q9UKV0 1011 aa13.8□□□□□ -0.2
RNF4-212ENST00000509258 AOX1Q06278 1338 aa13.8□□□□□ -0.2
RNF4-212ENST00000509258 COL1A1P02452 1464 aaPredicted RBP13.8□□□□□ -0.2
RNF4-212ENST00000509258 UBE2Q2LH0YL09 131 aa13.79□□□□□ -0.2
RNF4-212ENST00000509258 PRAMEF18Q5VWM3 479 aa13.79□□□□□ -0.2
RNF4-212ENST00000509258 TTLL5Q6EMB2 1281 aa13.79□□□□□ -0.2
RNF4-212ENST00000509258 BICC1Q9H694 974 aaKnown RBP13.79□□□□□ -0.2
RNF4-212ENST00000509258 CD209Q9NNX6 404 aa13.79□□□□□ -0.2
RNF4-212ENST00000509258 JAG2Q9Y219 1238 aa13.79□□□□□ -0.2
RNF4-212ENST00000509258 PDE4DIPQ5VU43 2346 aa13.78□□□□□ -0.2
RNF4-212ENST00000509258 PLIN1O60240 522 aa13.78□□□□□ -0.2
RNF4-212ENST00000509258 GTF2IP78347 998 aa13.78□□□□□ -0.2
RNF4-212ENST00000509258 RABL6Q3YEC7 729 aaPredicted RBP13.78□□□□□ -0.2
RNF4-212ENST00000509258 KIAA0825Q8IV33 1275 aa13.78□□□□□ -0.2
RNF4-212ENST00000509258 KLHDC4Q8TBB5 520 aa13.78□□□□□ -0.2
RNF4-212ENST00000509258 USP44Q9H0E7 712 aa13.78□□□□□ -0.2
RNF4-212ENST00000509258 PTPRCP08575 1304 aa13.77□□□□□ -0.21
RNF4-212ENST00000509258 SOX10P56693 466 aa13.77□□□□□ -0.21
RNF4-212ENST00000509258 SREBF2Q12772 1141 aa13.77□□□□□ -0.21
RNF4-212ENST00000509258 PKN2Q16513 984 aaKnown RBP13.77□□□□□ -0.21
RNF4-212ENST00000509258 CCDC57Q2TAC2 916 aa13.77□□□□□ -0.21
RNF4-212ENST00000509258 LRRC24Q50LG9 513 aa13.77□□□□□ -0.21
RNF4-212ENST00000509258 LDHAL6AQ6ZMR3 332 aa13.77□□□□□ -0.21
RNF4-212ENST00000509258 C15orf52Q6ZUT6 534 aaKnown RBP13.77□□□□□ -0.21
RNF4-212ENST00000509258 ARMC9Q7Z3E5 817 aa13.77□□□□□ -0.21
RNF4-212ENST00000509258 ZBED3Q96IU2 234 aaPredicted RBP13.77□□□□□ -0.21
RNF4-212ENST00000509258 TM4SF4P48230 202 aa13.76□□□□□ -0.21
RNF4-212ENST00000509258 NOM1Q5C9Z4 860 aaKnown RBP13.76□□□□□ -0.21
RNF4-212ENST00000509258 ZNF296Q8WUU4 475 aaPredicted RBP13.76□□□□□ -0.21
RNF4-212ENST00000509258 CNNM1Q9NRU3 951 aa13.76□□□□□ -0.21
RNF4-212ENST00000509258 SMC4Q9NTJ3 1288 aa13.76□□□□□ -0.21
RNF4-212ENST00000509258 TNNQ9UQP3 1299 aa13.76□□□□□ -0.21
RNF4-212ENST00000509258 RIPOR2Q9Y4F9 1068 aa13.76□□□□□ -0.21
RNF4-212ENST00000509258 OTOFQ9HC10 1997 aa13.75□□□□□ -0.21
RNF4-212ENST00000509258 TBC1D8O95759 1140 aa13.75□□□□□ -0.21
RNF4-212ENST00000509258 IL1R1P14778 569 aa13.75□□□□□ -0.21
RNF4-212ENST00000509258 ALDH1L2Q3SY69 923 aa13.75□□□□□ -0.21
RNF4-212ENST00000509258 ZNF804AQ7Z570 1209 aa13.75□□□□□ -0.21
RNF4-212ENST00000509258 PCDH10Q9P2E7 1040 aa13.75□□□□□ -0.21
RNF4-212ENST00000509258 HPS5Q9UPZ3 1129 aa13.75□□□□□ -0.21
RNF4-212ENST00000509258 GYG1P46976 350 aa13.74□□□□□ -0.21
RNF4-212ENST00000509258 RFX5P48382 616 aaPredicted RBP13.74□□□□□ -0.21
RNF4-212ENST00000509258 MKRN3Q13064 507 aaKnown RBP13.74□□□□□ -0.21
RNF4-212ENST00000509258 DLGAP5Q15398 846 aa13.74□□□□□ -0.21
RNF4-212ENST00000509258 GRIK5Q16478 980 aa13.74□□□□□ -0.21
RNF4-212ENST00000509258 TAF7LQ5H9L4 462 aa13.74□□□□□ -0.21
RNF4-212ENST00000509258 MIER1Q8N108 512 aa13.74□□□□□ -0.21
RNF4-212ENST00000509258 VGLL2Q8N8G2 317 aa13.74□□□□□ -0.21
RNF4-212ENST00000509258 MTMR14Q8NCE2 650 aa13.74□□□□□ -0.21
RNF4-212ENST00000509258 CFHR5Q9BXR6 569 aa13.74□□□□□ -0.21
RNF4-212ENST00000509258 DEFB129Q9H1M3 183 aa13.74□□□□□ -0.21
RNF4-212ENST00000509258 NOB1Q9ULX3 412 aaKnown RBP13.74□□□□□ -0.21
RNF4-212ENST00000509258 ANGEL1Q9UNK9 670 aaKnown RBP13.74□□□□□ -0.21
RNF4-212ENST00000509258 PPP2R3BQ9Y5P8 575 aa13.74□□□□□ -0.21
RNF4-212ENST00000509258 SSC5DA1L4H1 1573 aa13.74□□□□□ -0.21
RNF4-212ENST00000509258 TNRC18O15417 2968 aaPredicted RBP13.73□□□□□ -0.21
RNF4-212ENST00000509258 F8W031 263 aaPredicted RBP13.73□□□□□ -0.21
RNF4-212ENST00000509258 MYO1BO43795 1136 aa13.73□□□□□ -0.21
RNF4-212ENST00000509258 PTPN12Q05209 780 aaKnown RBP13.73□□□□□ -0.21
RNF4-212ENST00000509258 PRKG1Q13976 671 aa13.73□□□□□ -0.21
RNF4-212ENST00000509258 LDLRAD1Q5T700 205 aa13.73□□□□□ -0.21
RNF4-212ENST00000509258 FAM84BQ96KN1 310 aaPredicted RBP13.73□□□□□ -0.21
RNF4-212ENST00000509258 FZD1Q9UP38 647 aa13.73□□□□□ -0.21
RNF4-212ENST00000509258 GPR25O00155 361 aa13.72□□□□□ -0.21
RNF4-212ENST00000509258 ALDH1A1P00352 501 aa13.72□□□□□ -0.21
RNF4-212ENST00000509258 RARSP54136 660 aaKnown RBP13.72□□□□□ -0.21
RNF4-212ENST00000509258 FKBP1AP62942 108 aaKnown RBP13.72□□□□□ -0.21
RNF4-212ENST00000509258 SPRYD7Q5W111 196 aa13.72□□□□□ -0.21
RNF4-212ENST00000509258 IQSEC3Q9UPP2 1182 aaPredicted RBP13.72□□□□□ -0.21
RNF4-212ENST00000509258 LAMB1P07942 1786 aa13.72□□□□□ -0.21
RNF4-212ENST00000509258 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.21
RNF4-212ENST00000509258 MANSC4A6NHS7 340 aaPredicted RBP13.71□□□□□ -0.21
RNF4-212ENST00000509258 PPP1R12BO60237 982 aaPredicted RBP13.71□□□□□ -0.21
RNF4-212ENST00000509258 SPDYE6P0CI01 402 aa13.71□□□□□ -0.21
RNF4-212ENST00000509258 ZBTB48P10074 688 aaPredicted RBP13.71□□□□□ -0.21
RNF4-212ENST00000509258 UBE4AQ14139 1066 aa13.71□□□□□ -0.21
RNF4-212ENST00000509258 MAP3K11Q16584 847 aa13.71□□□□□ -0.21
RNF4-212ENST00000509258 TDRD7Q8NHU6 1098 aaKnown RBP13.71□□□□□ -0.21
RNF4-212ENST00000509258 FAM205AQ6ZU69 1335 aa13.7□□□□□ -0.22
RNF4-212ENST00000509258 UNCXA6NJT0 531 aa13.7□□□□□ -0.22
RNF4-212ENST00000509258 FKTNO75072 461 aa13.7□□□□□ -0.22
RNF4-212ENST00000509258 INHBEP58166 350 aa13.7□□□□□ -0.22
RNF4-212ENST00000509258 SUPT20HL1Q3ZLR7 823 aa13.7□□□□□ -0.22
RNF4-212ENST00000509258 CFAP100Q494V2 611 aa13.7□□□□□ -0.22
RNF4-212ENST00000509258 FBXO46Q6PJ61 603 aaPredicted RBP13.7□□□□□ -0.22
RNF4-212ENST00000509258 FBXO33Q7Z6M2 555 aa13.7□□□□□ -0.22
RNF4-212ENST00000509258 PRMT6Q96LA8 375 aaPredicted RBP13.7□□□□□ -0.22
RNF4-212ENST00000509258 MROH5Q6ZUA9 1318 aa13.69□□□□□ -0.22
RNF4-212ENST00000509258 CLRN2A0PK11 232 aa13.69□□□□□ -0.22
RNF4-212ENST00000509258 ATG9AQ7Z3C6 839 aa13.69□□□□□ -0.22
RNF4-212ENST00000509258 SLC10A4Q96EP9 437 aa13.69□□□□□ -0.22
RNF4-212ENST00000509258 MEIS3Q99687 375 aa13.69□□□□□ -0.22
RNF4-212ENST00000509258 VEZTQ9HBM0 779 aa13.69□□□□□ -0.22
RNF4-212ENST00000509258 BCAR3O75815 825 aa13.68□□□□□ -0.22
RNF4-212ENST00000509258 CT47B1P0C2W7 299 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms