RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, human

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-208	ENST00000509177	EPHA10	Q5JZY3	1008 aa		13.66	□□□□□ -0.22
TUSC3-208	ENST00000509177	LDHAL6A	Q6ZMR3	332 aa		13.66	□□□□□ -0.22
TUSC3-208	ENST00000509177	ZNF594	Q96JF6	807 aa	Predicted RBP	13.66	□□□□□ -0.22
TUSC3-208	ENST00000509177	MXD3	Q9BW11	206 aa		13.66	□□□□□ -0.22
TUSC3-208	ENST00000509177	COA1	Q9GZY4	146 aa		13.66	□□□□□ -0.22
TUSC3-208	ENST00000509177	HDAC9	Q9UKV0	1011 aa		13.66	□□□□□ -0.22
TUSC3-208	ENST00000509177	CENPF	P49454	3210 aa		13.66	□□□□□ -0.22
TUSC3-208	ENST00000509177	BRCA2	P51587	3418 aa		13.65	□□□□□ -0.22
TUSC3-208	ENST00000509177	MYH3	P11055	1940 aa		13.65	□□□□□ -0.22
TUSC3-208	ENST00000509177	TM4SF4	P48230	202 aa		13.65	□□□□□ -0.22
TUSC3-208	ENST00000509177	GPR25	O00155	361 aa		13.64	□□□□□ -0.23
TUSC3-208	ENST00000509177	CT47B1	P0C2W7	299 aa	Predicted RBP	13.64	□□□□□ -0.23
TUSC3-208	ENST00000509177	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.64	□□□□□ -0.23
TUSC3-208	ENST00000509177	DACT2	Q5SW24	774 aa		13.64	□□□□□ -0.23
TUSC3-208	ENST00000509177	DIEXF	Q68CQ4	756 aa	Known RBP	13.64	□□□□□ -0.23
TUSC3-208	ENST00000509177	TTLL5	Q6EMB2	1281 aa		13.64	□□□□□ -0.23
TUSC3-208	ENST00000509177	TXNRD3	Q86VQ6	643 aa		13.64	□□□□□ -0.23
TUSC3-208	ENST00000509177	OGFOD1	Q8N543	542 aa		13.64	□□□□□ -0.23
TUSC3-208	ENST00000509177	SUCLG2	Q96I99	432 aa		13.64	□□□□□ -0.23
TUSC3-208	ENST00000509177	ZNF646	O15015	1829 aa	Predicted RBP	13.64	□□□□□ -0.23
TUSC3-208	ENST00000509177	WNT10B	O00744	389 aa		13.63	□□□□□ -0.23
TUSC3-208	ENST00000509177	KLRK1	P26718	216 aa		13.63	□□□□□ -0.23
TUSC3-208	ENST00000509177	MKRN3	Q13064	507 aa	Known RBP	13.63	□□□□□ -0.23
TUSC3-208	ENST00000509177	NOM1	Q5C9Z4	860 aa	Known RBP	13.63	□□□□□ -0.23
TUSC3-208	ENST00000509177	STRIP1	Q5VSL9	837 aa		13.63	□□□□□ -0.23
TUSC3-208	ENST00000509177	ZNF804A	Q7Z570	1209 aa		13.63	□□□□□ -0.23
TUSC3-208	ENST00000509177	R3HDML	Q9H3Y0	253 aa		13.63	□□□□□ -0.23
TUSC3-208	ENST00000509177	MYO3B	Q8WXR4	1341 aa		13.63	□□□□□ -0.23
TUSC3-208	ENST00000509177	SNAP23	O00161	211 aa		13.62	□□□□□ -0.23
TUSC3-208	ENST00000509177	GTF2I	P78347	998 aa		13.62	□□□□□ -0.23
TUSC3-208	ENST00000509177	TTLL12	Q14166	644 aa	Predicted RBP	13.62	□□□□□ -0.23
TUSC3-208	ENST00000509177	TRMT2A	Q8IZ69	625 aa	Known RBP	13.62	□□□□□ -0.23
TUSC3-208	ENST00000509177	BICC1	Q9H694	974 aa	Known RBP	13.62	□□□□□ -0.23
TUSC3-208	ENST00000509177	CD209	Q9NNX6	404 aa		13.62	□□□□□ -0.23
TUSC3-208	ENST00000509177	SASH1	O94885	1247 aa		13.61	□□□□□ -0.23
TUSC3-208	ENST00000509177	PTPN12	Q05209	780 aa	Known RBP	13.61	□□□□□ -0.23
TUSC3-208	ENST00000509177	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.61	□□□□□ -0.23
TUSC3-208	ENST00000509177	MIER1	Q8N108	512 aa		13.61	□□□□□ -0.23
TUSC3-208	ENST00000509177	CFHR5	Q9BXR6	569 aa		13.61	□□□□□ -0.23
TUSC3-208	ENST00000509177	NOB1	Q9ULX3	412 aa	Known RBP	13.61	□□□□□ -0.23
TUSC3-208	ENST00000509177	SPEF2	Q9C093	1822 aa		13.61	□□□□□ -0.23
TUSC3-208	ENST00000509177	UTY	O14607	1347 aa		13.61	□□□□□ -0.23
TUSC3-208	ENST00000509177	SREBF2	Q12772	1141 aa		13.6	□□□□□ -0.23
TUSC3-208	ENST00000509177	KIAA0825	Q8IV33	1275 aa		13.6	□□□□□ -0.23
TUSC3-208	ENST00000509177	KAZALD1	Q96I82	304 aa		13.6	□□□□□ -0.23
TUSC3-208	ENST00000509177	API5	Q9BZZ5	524 aa	Known RBP	13.6	□□□□□ -0.23
TUSC3-208	ENST00000509177	FKTN	O75072	461 aa		13.59	□□□□□ -0.23
TUSC3-208	ENST00000509177	NF2	P35240	595 aa		13.59	□□□□□ -0.23
TUSC3-208	ENST00000509177	PRKG1	Q13976	671 aa		13.59	□□□□□ -0.23
TUSC3-208	ENST00000509177	LDLRAD1	Q5T700	205 aa		13.59	□□□□□ -0.23
TUSC3-208	ENST00000509177	PUS3	Q9BZE2	481 aa	Known RBP	13.59	□□□□□ -0.23
TUSC3-208	ENST00000509177	USP44	Q9H0E7	712 aa		13.59	□□□□□ -0.23
TUSC3-208	ENST00000509177	FZD1	Q9UP38	647 aa		13.59	□□□□□ -0.23
TUSC3-208	ENST00000509177	MROH5	Q6ZUA9	1318 aa		13.59	□□□□□ -0.23
TUSC3-208	ENST00000509177	MMP14	P50281	582 aa		13.58	□□□□□ -0.24
TUSC3-208	ENST00000509177	UBE4A	Q14139	1066 aa		13.58	□□□□□ -0.24
TUSC3-208	ENST00000509177	RABL6	Q3YEC7	729 aa	Predicted RBP	13.58	□□□□□ -0.24
TUSC3-208	ENST00000509177	METTL24	Q5JXM2	366 aa		13.58	□□□□□ -0.24
TUSC3-208	ENST00000509177	SPRYD7	Q5W111	196 aa		13.58	□□□□□ -0.24
TUSC3-208	ENST00000509177	C15orf52	Q6ZUT6	534 aa	Known RBP	13.58	□□□□□ -0.24
TUSC3-208	ENST00000509177	ARMC9	Q7Z3E5	817 aa		13.58	□□□□□ -0.24
TUSC3-208	ENST00000509177	VPS37D	Q86XT2	251 aa		13.58	□□□□□ -0.24
TUSC3-208	ENST00000509177	ZBED3	Q96IU2	234 aa	Predicted RBP	13.58	□□□□□ -0.24
TUSC3-208	ENST00000509177		F8W031	263 aa	Predicted RBP	13.57	□□□□□ -0.24
TUSC3-208	ENST00000509177	UBTFL1	P0CB47	393 aa	Predicted RBP	13.57	□□□□□ -0.24
TUSC3-208	ENST00000509177	HIBADH	P31937	336 aa	Known RBP	13.57	□□□□□ -0.24
TUSC3-208	ENST00000509177	RARS	P54136	660 aa	Known RBP	13.57	□□□□□ -0.24
TUSC3-208	ENST00000509177	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
TUSC3-208	ENST00000509177	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.57	□□□□□ -0.24
TUSC3-208	ENST00000509177	ANKRD44	Q8N8A2	993 aa		13.57	□□□□□ -0.24
TUSC3-208	ENST00000509177	HDAC5	Q9UQL6	1122 aa		13.57	□□□□□ -0.24
TUSC3-208	ENST00000509177	JAG2	Q9Y219	1238 aa		13.57	□□□□□ -0.24
TUSC3-208	ENST00000509177	FRAT2	O75474	233 aa	Predicted RBP	13.56	□□□□□ -0.24
TUSC3-208	ENST00000509177	IL1R1	P14778	569 aa		13.56	□□□□□ -0.24
TUSC3-208	ENST00000509177	GYG1	P46976	350 aa		13.56	□□□□□ -0.24
TUSC3-208	ENST00000509177	DLGAP5	Q15398	846 aa		13.56	□□□□□ -0.24
TUSC3-208	ENST00000509177	LRRC24	Q50LG9	513 aa		13.56	□□□□□ -0.24
TUSC3-208	ENST00000509177	KLHDC4	Q8TBB5	520 aa		13.56	□□□□□ -0.24
TUSC3-208	ENST00000509177	ANGEL1	Q9UNK9	670 aa	Known RBP	13.56	□□□□□ -0.24
TUSC3-208	ENST00000509177	RIPOR2	Q9Y4F9	1068 aa		13.56	□□□□□ -0.24
TUSC3-208	ENST00000509177	KIF16B	Q96L93	1317 aa		13.56	□□□□□ -0.24
TUSC3-208	ENST00000509177	SSC5D	A1L4H1	1573 aa		13.55	□□□□□ -0.24
TUSC3-208	ENST00000509177	IPO8	O15397	1037 aa	Known RBP	13.55	□□□□□ -0.24
TUSC3-208	ENST00000509177	RBM5	P52756	815 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
TUSC3-208	ENST00000509177	CAVIN4	Q5BKX8	364 aa		13.55	□□□□□ -0.24
TUSC3-208	ENST00000509177	IFNL1	Q8IU54	200 aa		13.55	□□□□□ -0.24
TUSC3-208	ENST00000509177	CLMN	Q96JQ2	1002 aa		13.55	□□□□□ -0.24
TUSC3-208	ENST00000509177	DEFB129	Q9H1M3	183 aa		13.55	□□□□□ -0.24
TUSC3-208	ENST00000509177	POTEF	A5A3E0	1075 aa		13.54	□□□□□ -0.24
TUSC3-208	ENST00000509177	ALDH1A1	P00352	501 aa		13.54	□□□□□ -0.24
TUSC3-208	ENST00000509177	MAP3K11	Q16584	847 aa		13.54	□□□□□ -0.24
TUSC3-208	ENST00000509177	OTOP1	Q7RTM1	612 aa		13.54	□□□□□ -0.24
TUSC3-208	ENST00000509177	CERS5	Q8N5B7	392 aa		13.54	□□□□□ -0.24
TUSC3-208	ENST00000509177	FRAT1	Q92837	279 aa	Predicted RBP	13.54	□□□□□ -0.24
TUSC3-208	ENST00000509177	SLC10A4	Q96EP9	437 aa		13.54	□□□□□ -0.24
TUSC3-208	ENST00000509177	FAM84B	Q96KN1	310 aa	Predicted RBP	13.54	□□□□□ -0.24
TUSC3-208	ENST00000509177	TRIM17	Q9Y577	477 aa		13.54	□□□□□ -0.24
TUSC3-208	ENST00000509177	PCDHAC2	Q9Y5I4	1007 aa		13.54	□□□□□ -0.24
TUSC3-208	ENST00000509177	IRS2	Q9Y4H2	1338 aa		13.54	□□□□□ -0.24
TUSC3-208	ENST00000509177	MANSC4	A6NHS7	340 aa	Predicted RBP	13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms