RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 IFNL1Q8IU54 200 aa20.45■□□□□ 0.86
CXCL1-202ENST00000509101 IRS2Q9Y4H2 1338 aa20.45■□□□□ 0.86
CXCL1-202ENST00000509101 CLRN2A0PK11 232 aa20.44■□□□□ 0.86
CXCL1-202ENST00000509101 F8W031 263 aaPredicted RBP20.44■□□□□ 0.86
CXCL1-202ENST00000509101 IGF2BP3O00425 579 aaKnown RBP eCLIP20.44■□□□□ 0.86
CXCL1-202ENST00000509101 TAF5LO75529 589 aa20.44■□□□□ 0.86
CXCL1-202ENST00000509101 CSF1RP07333 972 aa20.44■□□□□ 0.86
CXCL1-202ENST00000509101 ZBTB48P10074 688 aaPredicted RBP20.44■□□□□ 0.86
CXCL1-202ENST00000509101 FLIIQ13045 1269 aa20.44■□□□□ 0.86
CXCL1-202ENST00000509101 MAP3K11Q16584 847 aa20.44■□□□□ 0.86
CXCL1-202ENST00000509101 HELBQ8NG08 1087 aaPredicted RBP20.44■□□□□ 0.86
CXCL1-202ENST00000509101 MYH16Q9H6N6 1097 aa20.44■□□□□ 0.86
CXCL1-202ENST00000509101 PPP2R3BQ9Y5P8 575 aa20.44■□□□□ 0.86
CXCL1-202ENST00000509101 MKI67P46013 3256 aaKnown RBP20.44■□□□□ 0.86
CXCL1-202ENST00000509101 ANKRD18BA2A2Z9 1011 aa20.43■□□□□ 0.86
CXCL1-202ENST00000509101 PPP1R12BO60237 982 aaPredicted RBP20.43■□□□□ 0.86
CXCL1-202ENST00000509101 FKBP5Q13451 457 aaPredicted RBP20.43■□□□□ 0.86
CXCL1-202ENST00000509101 CFAP100Q494V2 611 aa20.43■□□□□ 0.86
CXCL1-202ENST00000509101 OTOP1Q7RTM1 612 aa20.43■□□□□ 0.86
CXCL1-202ENST00000509101 MTMR14Q8NCE2 650 aa20.43■□□□□ 0.86
CXCL1-202ENST00000509101 VEZTQ9HBM0 779 aa20.43■□□□□ 0.86
CXCL1-202ENST00000509101 INHBEP58166 350 aa20.42■□□□□ 0.86
CXCL1-202ENST00000509101 DNAAF4Q8WXU2 420 aa20.42■□□□□ 0.86
CXCL1-202ENST00000509101 JAG2Q9Y219 1238 aa20.42■□□□□ 0.86
CXCL1-202ENST00000509101 AOX1Q06278 1338 aa20.42■□□□□ 0.86
CXCL1-202ENST00000509101 KIAA0100Q14667 2235 aaKnown RBP20.41■□□□□ 0.86
CXCL1-202ENST00000509101 SPDYE2BA6NHP3 402 aa20.41■□□□□ 0.86
CXCL1-202ENST00000509101 MYO1BO43795 1136 aa20.41■□□□□ 0.86
CXCL1-202ENST00000509101 SPDYE6P0CI01 402 aa20.41■□□□□ 0.86
CXCL1-202ENST00000509101 ZNF804AQ7Z570 1209 aa20.41■□□□□ 0.86
CXCL1-202ENST00000509101 LINS1Q8NG48 757 aa20.41■□□□□ 0.86
CXCL1-202ENST00000509101 CHMP3Q9Y3E7 222 aa20.41■□□□□ 0.86
CXCL1-202ENST00000509101 BRCA2P51587 3418 aa20.4■□□□□ 0.86
CXCL1-202ENST00000509101 POTEFA5A3E0 1075 aa20.4■□□□□ 0.86
CXCL1-202ENST00000509101 NBPF12Q5TAG4 269 aaPredicted RBP20.4■□□□□ 0.86
CXCL1-202ENST00000509101 C15orf52Q6ZUT6 534 aaKnown RBP20.4■□□□□ 0.86
CXCL1-202ENST00000509101 CD99L2Q8TCZ2 262 aa20.4■□□□□ 0.86
CXCL1-202ENST00000509101 IL1R1P14778 569 aa20.39■□□□□ 0.85
CXCL1-202ENST00000509101 GJA5P36382 358 aa20.39■□□□□ 0.85
CXCL1-202ENST00000509101 CRHR2Q13324 411 aa20.39■□□□□ 0.85
CXCL1-202ENST00000509101 SUPT20HL1Q3ZLR7 823 aa20.39■□□□□ 0.85
CXCL1-202ENST00000509101 GCC1Q96CN9 775 aa20.39■□□□□ 0.85
CXCL1-202ENST00000509101 ERO1AQ96HE7 468 aa20.39■□□□□ 0.85
CXCL1-202ENST00000509101 PRMT6Q96LA8 375 aaPredicted RBP20.39■□□□□ 0.85
CXCL1-202ENST00000509101 IREB2P48200 963 aaKnown RBP20.38■□□□□ 0.85
CXCL1-202ENST00000509101 RBM5P52756 815 aaKnown RBP eCLIP20.38■□□□□ 0.85
CXCL1-202ENST00000509101 IFIT5Q13325 482 aaKnown RBP20.38■□□□□ 0.85
CXCL1-202ENST00000509101 WWC1Q8IX03 1113 aa20.38■□□□□ 0.85
CXCL1-202ENST00000509101 FKBP1AP62942 108 aaKnown RBP20.37■□□□□ 0.85
CXCL1-202ENST00000509101 FOXO4P98177 505 aa20.37■□□□□ 0.85
CXCL1-202ENST00000509101 CCDC27Q2M243 656 aa20.37■□□□□ 0.85
CXCL1-202ENST00000509101 INTS3Q68E01 1043 aaKnown RBP20.37■□□□□ 0.85
CXCL1-202ENST00000509101 PTPN22Q9Y2R2 807 aa20.37■□□□□ 0.85
CXCL1-202ENST00000509101 UNCXA6NJT0 531 aa20.36■□□□□ 0.85
CXCL1-202ENST00000509101 PLIN1O60240 522 aa20.36■□□□□ 0.85
CXCL1-202ENST00000509101 USP2O75604 605 aaPredicted RBP20.36■□□□□ 0.85
CXCL1-202ENST00000509101 RASA3Q14644 834 aa20.36■□□□□ 0.85
CXCL1-202ENST00000509101 OTUD7BQ6GQQ9 843 aa20.36■□□□□ 0.85
CXCL1-202ENST00000509101 ANKRD13AQ8IZ07 590 aa20.36■□□□□ 0.85
CXCL1-202ENST00000509101 FANCIQ9NVI1 1328 aa20.35■□□□□ 0.85
CXCL1-202ENST00000509101 ZSWIM8A7E2V4 1837 aa20.35■□□□□ 0.85
CXCL1-202ENST00000509101 ZNF594Q96JF6 807 aaPredicted RBP20.35■□□□□ 0.85
CXCL1-202ENST00000509101 PTPN18Q99952 460 aa20.35■□□□□ 0.85
CXCL1-202ENST00000509101 ELP3Q9H9T3 547 aa20.35■□□□□ 0.85
CXCL1-202ENST00000509101 EFCC1Q9HA90 598 aa20.35■□□□□ 0.85
CXCL1-202ENST00000509101 IL16Q14005 1332 aa20.34■□□□□ 0.85
CXCL1-202ENST00000509101 F6X3S4 739 aa20.34■□□□□ 0.85
CXCL1-202ENST00000509101 CCDC184Q52MB2 194 aa20.34■□□□□ 0.85
CXCL1-202ENST00000509101 TAF7LQ5H9L4 462 aa20.34■□□□□ 0.85
CXCL1-202ENST00000509101 CAP1Q01518 475 aa20.33■□□□□ 0.85
CXCL1-202ENST00000509101 SP3Q02447 781 aa20.33■□□□□ 0.85
CXCL1-202ENST00000509101 EPHA10Q5JZY3 1008 aa20.33■□□□□ 0.85
CXCL1-202ENST00000509101 LMBR1LQ6UX01 489 aa20.33■□□□□ 0.85
CXCL1-202ENST00000509101 OPTNQ96CV9 577 aa20.33■□□□□ 0.85
CXCL1-202ENST00000509101 TNFAIP1Q13829 316 aa20.32■□□□□ 0.84
CXCL1-202ENST00000509101 SPDYE2Q495Y8 402 aa20.32■□□□□ 0.84
CXCL1-202ENST00000509101 HABP4Q5JVS0 413 aaKnown RBP20.32■□□□□ 0.84
CXCL1-202ENST00000509101 MFSD14BQ5SR56 506 aa20.32■□□□□ 0.84
CXCL1-202ENST00000509101 LDHAL6AQ6ZMR3 332 aa20.32■□□□□ 0.84
CXCL1-202ENST00000509101 CDAN1Q8IWY9 1227 aa20.32■□□□□ 0.84
CXCL1-202ENST00000509101 ARMC5Q96C12 935 aa20.32■□□□□ 0.84
CXCL1-202ENST00000509101 CNNM1Q9NRU3 951 aa20.32■□□□□ 0.84
CXCL1-202ENST00000509101 ZNF70Q9UC06 446 aaPredicted RBP20.32■□□□□ 0.84
CXCL1-202ENST00000509101 FAM205AQ6ZU69 1335 aa20.31■□□□□ 0.84
CXCL1-202ENST00000509101 TESPA1A2RU30 521 aaPredicted RBP20.31■□□□□ 0.84
CXCL1-202ENST00000509101 CCDC57Q2TAC2 916 aa20.31■□□□□ 0.84
CXCL1-202ENST00000509101 BEND3Q5T5X7 828 aa20.31■□□□□ 0.84
CXCL1-202ENST00000509101 CNKSR2Q8WXI2 1034 aa20.31■□□□□ 0.84
CXCL1-202ENST00000509101 TDRD3Q9H7E2 651 aaKnown RBP20.31■□□□□ 0.84
CXCL1-202ENST00000509101 TTF2Q9UNY4 1162 aaKnown RBP20.31■□□□□ 0.84
CXCL1-202ENST00000509101 EN2P19622 333 aaPredicted RBP20.3■□□□□ 0.84
CXCL1-202ENST00000509101 TCP10L2B9ZVM9 353 aa20.29■□□□□ 0.84
CXCL1-202ENST00000509101 VAMP4O75379 141 aa20.29■□□□□ 0.84
CXCL1-202ENST00000509101 GYG1P46976 350 aa20.29■□□□□ 0.84
CXCL1-202ENST00000509101 MS4A4AQ96JQ5 239 aa20.29■□□□□ 0.84
CXCL1-202ENST00000509101 TEPSINQ96N21 525 aa20.29■□□□□ 0.84
CXCL1-202ENST00000509101 SERPINA10Q9UK55 444 aa20.29■□□□□ 0.84
CXCL1-202ENST00000509101 MYH13Q9UKX3 1938 aa20.28■□□□□ 0.84
CXCL1-202ENST00000509101 GRM8O00222 908 aa20.28■□□□□ 0.84
CXCL1-202ENST00000509101 EXOSC9Q06265 439 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms