RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 PUM3Q15397 648 aaKnown RBP29.24■■■□□ 2.27
CSNK1G3-204ENST00000508708 NBPF9Q3BBW0 867 aa29.24■■■□□ 2.27
CSNK1G3-204ENST00000508708 ZBED3Q96IU2 234 aaPredicted RBP29.24■■■□□ 2.27
CSNK1G3-204ENST00000508708 COPRSQ9NQ92 184 aa29.24■■■□□ 2.27
CSNK1G3-204ENST00000508708 JAG2Q9Y219 1238 aa29.24■■■□□ 2.27
CSNK1G3-204ENST00000508708 THSD7BQ9C0I4 1608 aa29.23■■■□□ 2.27
CSNK1G3-204ENST00000508708 WNT10BO00744 389 aa29.23■■■□□ 2.27
CSNK1G3-204ENST00000508708 SIL1Q9H173 461 aa29.23■■■□□ 2.27
CSNK1G3-204ENST00000508708 PA2G4Q9UQ80 394 aaKnown RBP29.23■■■□□ 2.27
CSNK1G3-204ENST00000508708 RLBP1P12271 317 aa29.22■■■□□ 2.27
CSNK1G3-204ENST00000508708 DEFB115Q30KQ5 88 aa29.22■■■□□ 2.27
CSNK1G3-204ENST00000508708 SAPCD2Q86UD0 394 aa29.22■■■□□ 2.27
CSNK1G3-204ENST00000508708 SULF1Q8IWU6 871 aa29.21■■■□□ 2.27
CSNK1G3-204ENST00000508708 ZNF408Q9H9D4 720 aa29.21■■■□□ 2.27
CSNK1G3-204ENST00000508708 GNAI2P04899 355 aa29.2■■■□□ 2.26
CSNK1G3-204ENST00000508708 HDAC9Q9UKV0 1011 aa29.2■■■□□ 2.26
CSNK1G3-204ENST00000508708 DZIP1LQ8IYY4 767 aaKnown RBP29.19■■■□□ 2.26
CSNK1G3-204ENST00000508708 SRGAP3O43295 1099 aa29.18■■■□□ 2.26
CSNK1G3-204ENST00000508708 IL15P40933 162 aaPredicted RBP29.18■■■□□ 2.26
CSNK1G3-204ENST00000508708 FTSJ3Q8IY81 847 aaKnown RBP29.18■■■□□ 2.26
CSNK1G3-204ENST00000508708 MTMR14Q8NCE2 650 aa29.18■■■□□ 2.26
CSNK1G3-204ENST00000508708 LPIN2Q92539 896 aa29.18■■■□□ 2.26
CSNK1G3-204ENST00000508708 IFIT1P09914 478 aaKnown RBP29.17■■■□□ 2.26
CSNK1G3-204ENST00000508708 BCAMP50895 628 aa29.17■■■□□ 2.26
CSNK1G3-204ENST00000508708 CAVIN4Q5BKX8 364 aa29.17■■■□□ 2.26
CSNK1G3-204ENST00000508708 MFSD14BQ5SR56 506 aa29.17■■■□□ 2.26
CSNK1G3-204ENST00000508708 CDCA5Q96FF9 252 aa29.17■■■□□ 2.26
CSNK1G3-204ENST00000508708 HHIPL1Q96JK4 782 aa29.17■■■□□ 2.26
CSNK1G3-204ENST00000508708 VPS37DQ86XT2 251 aa29.16■■■□□ 2.26
CSNK1G3-204ENST00000508708 IQSEC3Q9UPP2 1182 aaPredicted RBP29.16■■■□□ 2.26
CSNK1G3-204ENST00000508708 WDR33Q9C0J8 1336 aaKnown RBP29.16■■■□□ 2.26
CSNK1G3-204ENST00000508708 ECM29Q5VYK3 1845 aa29.15■■■□□ 2.26
CSNK1G3-204ENST00000508708 F8W031 263 aaPredicted RBP29.15■■■□□ 2.26
CSNK1G3-204ENST00000508708 HSPA1AP0DMV8 641 aaKnown RBP29.15■■■□□ 2.26
CSNK1G3-204ENST00000508708 HSPA1BP0DMV9 641 aaKnown RBP29.15■■■□□ 2.26
CSNK1G3-204ENST00000508708 SLC5A1P13866 664 aa29.15■■■□□ 2.26
CSNK1G3-204ENST00000508708 SCAF8Q9UPN6 1271 aaKnown RBP29.15■■■□□ 2.26
CSNK1G3-204ENST00000508708 PCDHAC2Q9Y5I4 1007 aa29.15■■■□□ 2.26
CSNK1G3-204ENST00000508708 COL1A1P02452 1464 aaPredicted RBP29.15■■■□□ 2.26
CSNK1G3-204ENST00000508708 PNMA6EA0A0J9YXQ4 647 aa29.14■■■□□ 2.26
CSNK1G3-204ENST00000508708 ATP2B3Q16720 1220 aa29.14■■■□□ 2.26
CSNK1G3-204ENST00000508708 CYP4F22Q6NT55 531 aa29.14■■■□□ 2.26
CSNK1G3-204ENST00000508708 CAPNS2Q96L46 248 aa29.14■■■□□ 2.26
CSNK1G3-204ENST00000508708 CEP126Q9P2H0 1117 aa29.14■■■□□ 2.26
CSNK1G3-204ENST00000508708 ITPRIPQ8IWB1 547 aa29.13■■■□□ 2.25
CSNK1G3-204ENST00000508708 GBA2Q9HCG7 927 aaPredicted RBP29.13■■■□□ 2.25
CSNK1G3-204ENST00000508708 SPDYE2BA6NHP3 402 aa29.12■■■□□ 2.25
CSNK1G3-204ENST00000508708 SPDYE6P0CI01 402 aa29.12■■■□□ 2.25
CSNK1G3-204ENST00000508708 DLGAP5Q15398 846 aa29.12■■■□□ 2.25
CSNK1G3-204ENST00000508708 GRIK5Q16478 980 aa29.12■■■□□ 2.25
CSNK1G3-204ENST00000508708 CFAP100Q494V2 611 aa29.12■■■□□ 2.25
CSNK1G3-204ENST00000508708 AOX1Q06278 1338 aa29.12■■■□□ 2.25
CSNK1G3-204ENST00000508708 ZBTB7BO15156 539 aaPredicted RBP29.11■■■□□ 2.25
CSNK1G3-204ENST00000508708 MYH13Q9UKX3 1938 aa29.11■■■□□ 2.25
CSNK1G3-204ENST00000508708 PAPPA2Q9BXP8 1791 aa29.11■■■□□ 2.25
CSNK1G3-204ENST00000508708 ECE1P42892 770 aa29.1■■■□□ 2.25
CSNK1G3-204ENST00000508708 CHAF1AQ13111 956 aaPredicted RBP29.1■■■□□ 2.25
CSNK1G3-204ENST00000508708 TTF2Q9UNY4 1162 aaKnown RBP29.1■■■□□ 2.25
CSNK1G3-204ENST00000508708 HUNKP57058 714 aa29.09■■■□□ 2.25
CSNK1G3-204ENST00000508708 POLA2Q14181 598 aa29.09■■■□□ 2.25
CSNK1G3-204ENST00000508708 PAXIP1Q6ZW49 1069 aaPredicted RBP29.09■■■□□ 2.25
CSNK1G3-204ENST00000508708 APOBEC3FQ8IUX4 373 aaKnown RBP29.09■■■□□ 2.25
CSNK1G3-204ENST00000508708 PANK1Q8TE04 598 aa29.09■■■□□ 2.25
CSNK1G3-204ENST00000508708 TBC1D22AQ8WUA7 517 aa29.09■■■□□ 2.25
CSNK1G3-204ENST00000508708 PRMT6Q96LA8 375 aaPredicted RBP29.09■■■□□ 2.25
CSNK1G3-204ENST00000508708 C1orf115Q9H7X2 142 aa29.09■■■□□ 2.25
CSNK1G3-204ENST00000508708 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.09■■■□□ 2.25
CSNK1G3-204ENST00000508708 C2orf69Q8N8R5 385 aa29.08■■■□□ 2.25
CSNK1G3-204ENST00000508708 SERPINA10Q9UK55 444 aa29.08■■■□□ 2.25
CSNK1G3-204ENST00000508708 ZBTB22O15209 634 aa29.07■■■□□ 2.24
CSNK1G3-204ENST00000508708 FRAT2O75474 233 aaPredicted RBP29.07■■■□□ 2.24
CSNK1G3-204ENST00000508708 ADORA1P30542 326 aa29.07■■■□□ 2.24
CSNK1G3-204ENST00000508708 RCAN3Q9UKA8 241 aa29.07■■■□□ 2.24
CSNK1G3-204ENST00000508708 TFCP2Q12800 502 aa29.06■■■□□ 2.24
CSNK1G3-204ENST00000508708 PRAMEF18Q5VWM3 479 aa29.06■■■□□ 2.24
CSNK1G3-204ENST00000508708 SSH3Q8TE77 659 aa29.06■■■□□ 2.24
CSNK1G3-204ENST00000508708 WBP1LQ9NX94 342 aa29.06■■■□□ 2.24
CSNK1G3-204ENST00000508708 PHKA1P46020 1223 aa29.05■■■□□ 2.24
CSNK1G3-204ENST00000508708 AOC2O75106 756 aa29.04■■■□□ 2.24
CSNK1G3-204ENST00000508708 FKBP1BP68106 108 aa29.04■■■□□ 2.24
CSNK1G3-204ENST00000508708 ATP8B2P98198 1209 aa29.04■■■□□ 2.24
CSNK1G3-204ENST00000508708 GRM1Q13255 1194 aa29.04■■■□□ 2.24
CSNK1G3-204ENST00000508708 SUGT1Q9Y2Z0 365 aa29.04■■■□□ 2.24
CSNK1G3-204ENST00000508708 A0A1B0GUL7 405 aa29.03■■■□□ 2.24
CSNK1G3-204ENST00000508708 CLRN2A0PK11 232 aa29.03■■■□□ 2.24
CSNK1G3-204ENST00000508708 CRKP46108 304 aa29.03■■■□□ 2.24
CSNK1G3-204ENST00000508708 SSC5DA1L4H1 1573 aa29.02■■■□□ 2.24
CSNK1G3-204ENST00000508708 MAP2K2P36507 400 aa29.02■■■□□ 2.24
CSNK1G3-204ENST00000508708 RBM5P52756 815 aaKnown RBP eCLIP29.02■■■□□ 2.24
CSNK1G3-204ENST00000508708 TIMM10P62072 90 aa29.02■■■□□ 2.24
CSNK1G3-204ENST00000508708 HDLBPQ00341 1268 aaKnown RBP29.02■■■□□ 2.24
CSNK1G3-204ENST00000508708 SPDYE2Q495Y8 402 aa29.02■■■□□ 2.24
CSNK1G3-204ENST00000508708 CCDC102BQ68D86 513 aa29.02■■■□□ 2.24
CSNK1G3-204ENST00000508708 RGMBQ6NW40 437 aa29.02■■■□□ 2.24
CSNK1G3-204ENST00000508708 DEFB129Q9H1M3 183 aa29.02■■■□□ 2.24
CSNK1G3-204ENST00000508708 FAM155AB1AL88 458 aaPredicted RBP29.01■■■□□ 2.23
CSNK1G3-204ENST00000508708 FOXN1O15353 648 aa29.01■■■□□ 2.23
CSNK1G3-204ENST00000508708 MYO1BO43795 1136 aa29.01■■■□□ 2.23
CSNK1G3-204ENST00000508708 WDR66Q8TBY9 1149 aa29.01■■■□□ 2.23
CSNK1G3-204ENST00000508708 AKAP2Q9Y2D5 859 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms