RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 FOXJ1Q92949 421 aa9.98□□□□□ -0.81
CCSER1-207ENST00000508550 GJD4Q96KN9 370 aaPredicted RBP9.98□□□□□ -0.81
CCSER1-207ENST00000508550 C9orf78Q9NZ63 289 aaPredicted RBP9.98□□□□□ -0.81
CCSER1-207ENST00000508550 AOX1Q06278 1338 aa9.98□□□□□ -0.81
CCSER1-207ENST00000508550 PRAMEF22A3QJZ6 481 aa9.97□□□□□ -0.81
CCSER1-207ENST00000508550 CYP19A1P11511 503 aaPredicted RBP9.97□□□□□ -0.81
CCSER1-207ENST00000508550 BMP1P13497 986 aa9.97□□□□□ -0.81
CCSER1-207ENST00000508550 GCKRQ14397 625 aa9.97□□□□□ -0.81
CCSER1-207ENST00000508550 CSPP1Q1MSJ5 1256 aa9.97□□□□□ -0.81
CCSER1-207ENST00000508550 PROSER3Q2NL68 480 aa9.97□□□□□ -0.81
CCSER1-207ENST00000508550 RABL6Q3YEC7 729 aaPredicted RBP9.97□□□□□ -0.81
CCSER1-207ENST00000508550 C8orf34Q49A92 452 aa9.97□□□□□ -0.81
CCSER1-207ENST00000508550 ANKRD45Q5TZF3 282 aa9.97□□□□□ -0.81
CCSER1-207ENST00000508550 C8orf37Q96NL8 207 aa9.97□□□□□ -0.81
CCSER1-207ENST00000508550 ATRNO75882 1429 aa9.97□□□□□ -0.81
CCSER1-207ENST00000508550 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.96□□□□□ -0.81
CCSER1-207ENST00000508550 UBR2Q8IWV8 1755 aa9.96□□□□□ -0.81
CCSER1-207ENST00000508550 EPB41L2O43491 1005 aaKnown RBP9.96□□□□□ -0.82
CCSER1-207ENST00000508550 ADH1CP00326 375 aa9.96□□□□□ -0.82
CCSER1-207ENST00000508550 IGKV5-2P06315 115 aa9.96□□□□□ -0.82
CCSER1-207ENST00000508550 HSP90B1P14625 803 aaKnown RBP9.96□□□□□ -0.82
CCSER1-207ENST00000508550 HSPA1LP34931 641 aa9.96□□□□□ -0.82
CCSER1-207ENST00000508550 NBPF14Q5TI25 921 aa9.96□□□□□ -0.82
CCSER1-207ENST00000508550 NBPF10Q6P3W6 841 aaKnown RBP9.96□□□□□ -0.82
CCSER1-207ENST00000508550 NBPF15Q8N660 670 aa9.96□□□□□ -0.82
CCSER1-207ENST00000508550 KIF1BPQ96EK5 621 aa9.96□□□□□ -0.82
CCSER1-207ENST00000508550 LRRCC1Q9C099 1032 aa9.96□□□□□ -0.82
CCSER1-207ENST00000508550 ASAP1Q9ULH1 1129 aa9.96□□□□□ -0.82
CCSER1-207ENST00000508550 GLI3P10071 1580 aa9.96□□□□□ -0.82
CCSER1-207ENST00000508550 SHANK3Q9BYB0 1731 aa9.96□□□□□ -0.82
CCSER1-207ENST00000508550 N4BP2Q86UW6 1770 aaPredicted RBP9.96□□□□□ -0.82
CCSER1-207ENST00000508550 H7C1W4 665 aa9.95□□□□□ -0.82
CCSER1-207ENST00000508550 NBPF7P0C2Y1 421 aaPredicted RBP9.95□□□□□ -0.82
CCSER1-207ENST00000508550 TIMP2P16035 220 aa9.95□□□□□ -0.82
CCSER1-207ENST00000508550 TCIRG1Q13488 830 aa9.95□□□□□ -0.82
CCSER1-207ENST00000508550 C4orf48Q5BLP8 95 aa9.95□□□□□ -0.82
CCSER1-207ENST00000508550 NPAS3Q8IXF0 933 aa9.95□□□□□ -0.82
CCSER1-207ENST00000508550 ISCA1Q9BUE6 129 aa9.95□□□□□ -0.82
CCSER1-207ENST00000508550 PLA2G12BQ9BX93 195 aa9.95□□□□□ -0.82
CCSER1-207ENST00000508550 NXF1Q9UBU9 619 aaKnown RBP9.95□□□□□ -0.82
CCSER1-207ENST00000508550 STAP2Q9UGK3 403 aa9.95□□□□□ -0.82
CCSER1-207ENST00000508550 CCDC9Q9Y3X0 531 aaKnown RBP9.95□□□□□ -0.82
CCSER1-207ENST00000508550 LRRFIP2Q9Y608 721 aaKnown RBP9.95□□□□□ -0.82
CCSER1-207ENST00000508550 CICQ96RK0 1608 aaPredicted RBP9.94□□□□□ -0.82
CCSER1-207ENST00000508550 A0A087WZG4 1122 aa9.94□□□□□ -0.82
CCSER1-207ENST00000508550 PTCD1O75127 700 aaKnown RBP9.94□□□□□ -0.82
CCSER1-207ENST00000508550 MYL6BP14649 208 aa9.94□□□□□ -0.82
CCSER1-207ENST00000508550 RGS3P49796 1198 aa9.94□□□□□ -0.82
CCSER1-207ENST00000508550 RTL5Q5HYW3 569 aaPredicted RBP9.94□□□□□ -0.82
CCSER1-207ENST00000508550 CLEC4GQ6UXB4 293 aa9.94□□□□□ -0.82
CCSER1-207ENST00000508550 KIF6Q6ZMV9 814 aa9.94□□□□□ -0.82
CCSER1-207ENST00000508550 PPP1R42Q7Z4L9 355 aa9.94□□□□□ -0.82
CCSER1-207ENST00000508550 NPM2Q86SE8 214 aaKnown RBP9.94□□□□□ -0.82
CCSER1-207ENST00000508550 BPHLQ86WA6 291 aaPredicted RBP9.94□□□□□ -0.82
CCSER1-207ENST00000508550 ARMC2Q8NEN0 867 aa9.94□□□□□ -0.82
CCSER1-207ENST00000508550 ZFP42Q96MM3 310 aa9.94□□□□□ -0.82
CCSER1-207ENST00000508550 C1orf115Q9H7X2 142 aa9.94□□□□□ -0.82
CCSER1-207ENST00000508550 UPF2Q9HAU5 1272 aaKnown RBP9.94□□□□□ -0.82
CCSER1-207ENST00000508550 CWC25Q9NXE8 425 aaPredicted RBP9.94□□□□□ -0.82
CCSER1-207ENST00000508550 MAP3K15Q6ZN16 1313 aa9.93□□□□□ -0.82
CCSER1-207ENST00000508550 USP42Q9H9J4 1324 aaKnown RBP9.93□□□□□ -0.82
CCSER1-207ENST00000508550 LOC102724428A0A0B4J2F2 783 aa9.93□□□□□ -0.82
CCSER1-207ENST00000508550 SRGAP3O43295 1099 aa9.93□□□□□ -0.82
CCSER1-207ENST00000508550 A1BGP04217 495 aa9.93□□□□□ -0.82
CCSER1-207ENST00000508550 GRM5P41594 1212 aa9.93□□□□□ -0.82
CCSER1-207ENST00000508550 EIF5P55010 431 aaKnown RBP9.93□□□□□ -0.82
CCSER1-207ENST00000508550 CASP7P55210 303 aa9.93□□□□□ -0.82
CCSER1-207ENST00000508550 SIK1P57059 783 aa9.93□□□□□ -0.82
CCSER1-207ENST00000508550 MEX3CQ5U5Q3 659 aaKnown RBP9.93□□□□□ -0.82
CCSER1-207ENST00000508550 ZNF772Q68DY9 489 aaPredicted RBP9.93□□□□□ -0.82
CCSER1-207ENST00000508550 PLEKHM2Q8IWE5 1019 aa9.93□□□□□ -0.82
CCSER1-207ENST00000508550 LNPKQ9C0E8 428 aa9.93□□□□□ -0.82
CCSER1-207ENST00000508550 COPRSQ9NQ92 184 aa9.93□□□□□ -0.82
CCSER1-207ENST00000508550 ZNF831Q5JPB2 1677 aa9.93□□□□□ -0.82
CCSER1-207ENST00000508550 SALL3Q9BXA9 1300 aa9.92□□□□□ -0.82
CCSER1-207ENST00000508550 CDHR2Q9BYE9 1310 aa9.92□□□□□ -0.82
CCSER1-207ENST00000508550 PNMA6EA0A0J9YXQ4 647 aa9.92□□□□□ -0.82
CCSER1-207ENST00000508550 ANXA1P04083 346 aa9.92□□□□□ -0.82
CCSER1-207ENST00000508550 ANP32AP39687 249 aaKnown RBP9.92□□□□□ -0.82
CCSER1-207ENST00000508550 CLK2P49760 499 aaKnown RBP9.92□□□□□ -0.82
CCSER1-207ENST00000508550 WDR4P57081 412 aaKnown RBP9.92□□□□□ -0.82
CCSER1-207ENST00000508550 INSM1Q01101 510 aaPredicted RBP9.92□□□□□ -0.82
CCSER1-207ENST00000508550 AIMP1Q12904 312 aaKnown RBP9.92□□□□□ -0.82
CCSER1-207ENST00000508550 NR5A1Q13285 461 aa9.92□□□□□ -0.82
CCSER1-207ENST00000508550 SH3RF1Q7Z6J0 888 aa9.92□□□□□ -0.82
CCSER1-207ENST00000508550 DNAJC10Q8IXB1 793 aa9.92□□□□□ -0.82
CCSER1-207ENST00000508550 DDRGK1Q96HY6 314 aa9.92□□□□□ -0.82
CCSER1-207ENST00000508550 MYD88Q99836 296 aa9.92□□□□□ -0.82
CCSER1-207ENST00000508550 LAMB4A4D0S4 1761 aa9.92□□□□□ -0.82
CCSER1-207ENST00000508550 WNK3Q9BYP7 1800 aa9.91□□□□□ -0.82
CCSER1-207ENST00000508550 AFF2P51816 1311 aa9.91□□□□□ -0.82
CCSER1-207ENST00000508550 TTC41PQ6P2S7 1318 aa9.91□□□□□ -0.82
CCSER1-207ENST00000508550 CNTNAP4Q9C0A0 1308 aa9.91□□□□□ -0.82
CCSER1-207ENST00000508550 PCCAP05165 728 aaPredicted RBP9.91□□□□□ -0.82
CCSER1-207ENST00000508550 CWF19L2Q2TBE0 894 aaKnown RBP9.91□□□□□ -0.82
CCSER1-207ENST00000508550 PARP10Q53GL7 1025 aa9.91□□□□□ -0.82
CCSER1-207ENST00000508550 MRPL14Q6P1L8 145 aaKnown RBP9.91□□□□□ -0.82
CCSER1-207ENST00000508550 ZBTB38Q8NAP3 1195 aaPredicted RBP9.91□□□□□ -0.82
CCSER1-207ENST00000508550 SLC16A10Q8TF71 515 aa9.91□□□□□ -0.82
CCSER1-207ENST00000508550 SLC4A9Q96Q91 983 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms