RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 IFT57Q9NWB7 429 aa12.11□□□□□ -0.47
NEDD9-211ENST00000508546 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
NEDD9-211ENST00000508546 PPP1R12BO60237 982 aaPredicted RBP12.1□□□□□ -0.47
NEDD9-211ENST00000508546 IGKV5-2P06315 115 aa12.1□□□□□ -0.47
NEDD9-211ENST00000508546 WDR43Q15061 677 aaKnown RBP eCLIP12.1□□□□□ -0.47
NEDD9-211ENST00000508546 KIAA0825Q8IV33 1275 aa12.1□□□□□ -0.47
NEDD9-211ENST00000508546 MTMR14Q8NCE2 650 aa12.1□□□□□ -0.47
NEDD9-211ENST00000508546 WNK4Q96J92 1243 aa12.1□□□□□ -0.47
NEDD9-211ENST00000508546 DEFB129Q9H1M3 183 aa12.1□□□□□ -0.47
NEDD9-211ENST00000508546 ADAMTS8Q9UP79 889 aa12.1□□□□□ -0.47
NEDD9-211ENST00000508546 PPP2R3BQ9Y5P8 575 aa12.1□□□□□ -0.47
NEDD9-211ENST00000508546 OTOFQ9HC10 1997 aa12.1□□□□□ -0.47
NEDD9-211ENST00000508546 ZNF804BA4D1E1 1349 aa12.1□□□□□ -0.47
NEDD9-211ENST00000508546 SSC5DA1L4H1 1573 aa12.09□□□□□ -0.47
NEDD9-211ENST00000508546 ELL2O00472 640 aaPredicted RBP12.09□□□□□ -0.47
NEDD9-211ENST00000508546 GNAI1P63096 354 aa12.09□□□□□ -0.47
NEDD9-211ENST00000508546 CCDC30Q5VVM6 783 aa12.09□□□□□ -0.47
NEDD9-211ENST00000508546 DPF3Q92784 378 aa12.09□□□□□ -0.47
NEDD9-211ENST00000508546 ANKRD2Q9GZV1 360 aa12.09□□□□□ -0.47
NEDD9-211ENST00000508546 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
NEDD9-211ENST00000508546 A0A1W2PPC1 479 aa12.08□□□□□ -0.48
NEDD9-211ENST00000508546 IGHMBP2P38935 993 aaKnown RBP12.08□□□□□ -0.48
NEDD9-211ENST00000508546 GTF2IP78347 998 aa12.08□□□□□ -0.48
NEDD9-211ENST00000508546 CALD1Q05682 793 aaKnown RBP12.08□□□□□ -0.48
NEDD9-211ENST00000508546 DLGAP5Q15398 846 aa12.08□□□□□ -0.48
NEDD9-211ENST00000508546 OTUD7BQ6GQQ9 843 aa12.08□□□□□ -0.48
NEDD9-211ENST00000508546 KSR2Q6VAB6 950 aa12.08□□□□□ -0.48
NEDD9-211ENST00000508546 CLMNQ96JQ2 1002 aa12.08□□□□□ -0.48
NEDD9-211ENST00000508546 FZD1Q9UP38 647 aa12.08□□□□□ -0.48
NEDD9-211ENST00000508546 TESPA1A2RU30 521 aaPredicted RBP12.07□□□□□ -0.48
NEDD9-211ENST00000508546 PI4KAP2A4QPH2 592 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 H7C1W4 665 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 KLRK1P26718 216 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 SP3Q02447 781 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 SUPT20HL1Q3ZLR7 823 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 Q7L0L9 218 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 PI4KAP1Q8N8J0 262 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 C8orf58Q8NAV2 365 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 SH3TC2Q8TF17 1288 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 PLA2G12BQ9BX93 195 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 CD209Q9NNX6 404 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 STXBP5LQ9Y2K9 1186 aa12.07□□□□□ -0.48
NEDD9-211ENST00000508546 NEURL1BA8MQ27 555 aa12.06□□□□□ -0.48
NEDD9-211ENST00000508546 ITGA6P23229 1130 aa12.06□□□□□ -0.48
NEDD9-211ENST00000508546 C15orf52Q6ZUT6 534 aaKnown RBP12.06□□□□□ -0.48
NEDD9-211ENST00000508546 UBE3BQ7Z3V4 1068 aa12.06□□□□□ -0.48
NEDD9-211ENST00000508546 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.06□□□□□ -0.48
NEDD9-211ENST00000508546 MPHOSPH8Q99549 860 aa12.06□□□□□ -0.48
NEDD9-211ENST00000508546 ALPK3Q96L96 1907 aa12.05□□□□□ -0.48
NEDD9-211ENST00000508546 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
NEDD9-211ENST00000508546 ZBTB7BO15156 539 aaPredicted RBP12.05□□□□□ -0.48
NEDD9-211ENST00000508546 MYO1BO43795 1136 aa12.05□□□□□ -0.48
NEDD9-211ENST00000508546 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
NEDD9-211ENST00000508546 GJA5P36382 358 aa12.05□□□□□ -0.48
NEDD9-211ENST00000508546 IREB2P48200 963 aaKnown RBP12.05□□□□□ -0.48
NEDD9-211ENST00000508546 FKBP1AP62942 108 aaKnown RBP12.05□□□□□ -0.48
NEDD9-211ENST00000508546 CWF19L2Q2TBE0 894 aaKnown RBP12.05□□□□□ -0.48
NEDD9-211ENST00000508546 UBE2Q1Q7Z7E8 422 aa12.05□□□□□ -0.48
NEDD9-211ENST00000508546 NBPF11Q86T75 865 aa12.05□□□□□ -0.48
NEDD9-211ENST00000508546 ANKRD13AQ8IZ07 590 aa12.05□□□□□ -0.48
NEDD9-211ENST00000508546 CERS5Q8N5B7 392 aa12.05□□□□□ -0.48
NEDD9-211ENST00000508546 DEFB123Q8N688 67 aa12.05□□□□□ -0.48
NEDD9-211ENST00000508546 IRS2Q9Y4H2 1338 aa12.05□□□□□ -0.48
NEDD9-211ENST00000508546 TTC28Q96AY4 2481 aa12.04□□□□□ -0.48
NEDD9-211ENST00000508546 ARAP2Q8WZ64 1704 aa12.04□□□□□ -0.48
NEDD9-211ENST00000508546 USP2O75604 605 aaPredicted RBP12.04□□□□□ -0.48
NEDD9-211ENST00000508546 CSF1RP07333 972 aa12.04□□□□□ -0.48
NEDD9-211ENST00000508546 KCNJ4P48050 445 aa12.04□□□□□ -0.48
NEDD9-211ENST00000508546 CHRNDQ07001 517 aa12.04□□□□□ -0.48
NEDD9-211ENST00000508546 CFAP100Q494V2 611 aa12.04□□□□□ -0.48
NEDD9-211ENST00000508546 NBPF12Q5TAG4 269 aaPredicted RBP12.04□□□□□ -0.48
NEDD9-211ENST00000508546 PTPN18Q99952 460 aa12.04□□□□□ -0.48
NEDD9-211ENST00000508546 PRDM6Q9NQX0 595 aa12.04□□□□□ -0.48
NEDD9-211ENST00000508546 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.04□□□□□ -0.48
NEDD9-211ENST00000508546 EYSQ5T1H1 3165 aa12.04□□□□□ -0.48
NEDD9-211ENST00000508546 CLRN2A0PK11 232 aa12.03□□□□□ -0.48
NEDD9-211ENST00000508546 APAF1O14727 1248 aa12.03□□□□□ -0.48
NEDD9-211ENST00000508546 IL1R1P14778 569 aa12.03□□□□□ -0.48
NEDD9-211ENST00000508546 CASP7P55210 303 aa12.03□□□□□ -0.48
NEDD9-211ENST00000508546 ARHGEF6Q15052 776 aa12.03□□□□□ -0.48
NEDD9-211ENST00000508546 TSPYL6Q8N831 410 aa12.03□□□□□ -0.48
NEDD9-211ENST00000508546 PRMT6Q96LA8 375 aaPredicted RBP12.03□□□□□ -0.48
NEDD9-211ENST00000508546 STK31Q9BXU1 1019 aa12.03□□□□□ -0.48
NEDD9-211ENST00000508546 PCDHAC2Q9Y5I4 1007 aa12.03□□□□□ -0.48
NEDD9-211ENST00000508546 GCKRQ14397 625 aa12.02□□□□□ -0.49
NEDD9-211ENST00000508546 RASA3Q14644 834 aa12.02□□□□□ -0.49
NEDD9-211ENST00000508546 MTFR1Q15390 333 aa12.02□□□□□ -0.49
NEDD9-211ENST00000508546 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.49
NEDD9-211ENST00000508546 HTATIP2Q9BUP3 242 aa12.02□□□□□ -0.49
NEDD9-211ENST00000508546 VEZTQ9HBM0 779 aa12.02□□□□□ -0.49
NEDD9-211ENST00000508546 MTMR10Q9NXD2 777 aa12.02□□□□□ -0.49
NEDD9-211ENST00000508546 ANKRD18BA2A2Z9 1011 aa12.01□□□□□ -0.49
NEDD9-211ENST00000508546 TNFAIP1Q13829 316 aa12.01□□□□□ -0.49
NEDD9-211ENST00000508546 ZNF804AQ7Z570 1209 aa12.01□□□□□ -0.49
NEDD9-211ENST00000508546 OPTNQ96CV9 577 aa12.01□□□□□ -0.49
NEDD9-211ENST00000508546 ARHGAP39Q9C0H5 1083 aa12.01□□□□□ -0.49
NEDD9-211ENST00000508546 MYH16Q9H6N6 1097 aa12.01□□□□□ -0.49
NEDD9-211ENST00000508546 NR2E3Q9Y5X4 410 aa12.01□□□□□ -0.49
NEDD9-211ENST00000508546 AOX1Q06278 1338 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms