RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 ZBED3Q96IU2 234 aaPredicted RBP16.13■□□□□ 0.17
NR1I3-225ENST00000508387 HHIPL1Q96JK4 782 aa16.13■□□□□ 0.17
NR1I3-225ENST00000508387 RFX5P48382 616 aaPredicted RBP16.12■□□□□ 0.17
NR1I3-225ENST00000508387 DIEXFQ68CQ4 756 aaKnown RBP16.12■□□□□ 0.17
NR1I3-225ENST00000508387 OGFOD1Q8N543 542 aa16.12■□□□□ 0.17
NR1I3-225ENST00000508387 C2orf69Q8N8R5 385 aa16.12■□□□□ 0.17
NR1I3-225ENST00000508387 FZD1Q9UP38 647 aa16.12■□□□□ 0.17
NR1I3-225ENST00000508387 IQSEC3Q9UPP2 1182 aaPredicted RBP16.12■□□□□ 0.17
NR1I3-225ENST00000508387 UBE4AQ14139 1066 aa16.11■□□□□ 0.17
NR1I3-225ENST00000508387 GRIK5Q16478 980 aa16.11■□□□□ 0.17
NR1I3-225ENST00000508387 METTL24Q5JXM2 366 aa16.11■□□□□ 0.17
NR1I3-225ENST00000508387 RGMBQ6NW40 437 aa16.11■□□□□ 0.17
NR1I3-225ENST00000508387 FAM84BQ96KN1 310 aaPredicted RBP16.11■□□□□ 0.17
NR1I3-225ENST00000508387 PRDM10Q9NQV6 1147 aa16.11■□□□□ 0.17
NR1I3-225ENST00000508387 MROH5Q6ZUA9 1318 aa16.11■□□□□ 0.17
NR1I3-225ENST00000508387 SSC5DA1L4H1 1573 aa16.1■□□□□ 0.17
NR1I3-225ENST00000508387 CT47B1P0C2W7 299 aaPredicted RBP16.1■□□□□ 0.17
NR1I3-225ENST00000508387 TDRD7Q8NHU6 1098 aaKnown RBP16.1■□□□□ 0.17
NR1I3-225ENST00000508387 MEIS3Q99687 375 aa16.1■□□□□ 0.17
NR1I3-225ENST00000508387 HDAC9Q9UKV0 1011 aa16.1■□□□□ 0.17
NR1I3-225ENST00000508387 CLRN2A0PK11 232 aa16.09■□□□□ 0.17
NR1I3-225ENST00000508387 BCAR3O75815 825 aa16.09■□□□□ 0.17
NR1I3-225ENST00000508387 HIBADHP31937 336 aaKnown RBP16.09■□□□□ 0.17
NR1I3-225ENST00000508387 MAP2K2P36507 400 aa16.09■□□□□ 0.17
NR1I3-225ENST00000508387 ZNF157P51786 506 aaPredicted RBP16.09■□□□□ 0.17
NR1I3-225ENST00000508387 BRPF1P55201 1214 aaPredicted RBP16.09■□□□□ 0.17
NR1I3-225ENST00000508387 PTPN12Q05209 780 aaKnown RBP16.09■□□□□ 0.17
NR1I3-225ENST00000508387 RASAL3Q86YV0 1011 aa16.09■□□□□ 0.17
NR1I3-225ENST00000508387 LRRFIP2Q9Y608 721 aaKnown RBP16.09■□□□□ 0.17
NR1I3-225ENST00000508387 COL1A1P02452 1464 aaPredicted RBP16.09■□□□□ 0.17
NR1I3-225ENST00000508387 UBE2Q2LH0YL09 131 aa16.08■□□□□ 0.16
NR1I3-225ENST00000508387 PDE8BO95263 885 aa16.08■□□□□ 0.16
NR1I3-225ENST00000508387 SLC10A3P09131 477 aa16.08■□□□□ 0.16
NR1I3-225ENST00000508387 UBTFL1P0CB47 393 aaPredicted RBP16.08■□□□□ 0.16
NR1I3-225ENST00000508387 HNRNPUQ00839 825 aaKnown RBP eCLIP16.08■□□□□ 0.16
NR1I3-225ENST00000508387 PRKG1Q13976 671 aa16.08■□□□□ 0.16
NR1I3-225ENST00000508387 CFAP100Q494V2 611 aa16.08■□□□□ 0.16
NR1I3-225ENST00000508387 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.16
NR1I3-225ENST00000508387 SIL1Q9H173 461 aa16.08■□□□□ 0.16
NR1I3-225ENST00000508387 PA2G4Q9UQ80 394 aaKnown RBP16.08■□□□□ 0.16
NR1I3-225ENST00000508387 FAM205AQ6ZU69 1335 aa16.08■□□□□ 0.16
NR1I3-225ENST00000508387 MYH13Q9UKX3 1938 aa16.07■□□□□ 0.16
NR1I3-225ENST00000508387 BCAMP50895 628 aa16.07■□□□□ 0.16
NR1I3-225ENST00000508387 KIF23Q02241 960 aaPredicted RBP16.07■□□□□ 0.16
NR1I3-225ENST00000508387 CHAF1AQ13111 956 aaPredicted RBP16.07■□□□□ 0.16
NR1I3-225ENST00000508387 NOGQ13253 232 aa16.07■□□□□ 0.16
NR1I3-225ENST00000508387 DLGAP5Q15398 846 aa16.07■□□□□ 0.16
NR1I3-225ENST00000508387 MFSD14BQ5SR56 506 aa16.07■□□□□ 0.16
NR1I3-225ENST00000508387 ATG9AQ7Z3C6 839 aa16.07■□□□□ 0.16
NR1I3-225ENST00000508387 FBXO33Q7Z6M2 555 aa16.07■□□□□ 0.16
NR1I3-225ENST00000508387 PRMT6Q96LA8 375 aaPredicted RBP16.07■□□□□ 0.16
NR1I3-225ENST00000508387 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
NR1I3-225ENST00000508387 EYA2O00167 538 aa16.06■□□□□ 0.16
NR1I3-225ENST00000508387 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
NR1I3-225ENST00000508387 TRIM27P14373 513 aa16.06■□□□□ 0.16
NR1I3-225ENST00000508387 FGFR2P21802 821 aa16.06■□□□□ 0.16
NR1I3-225ENST00000508387 FKBP1AP62942 108 aaKnown RBP16.06■□□□□ 0.16
NR1I3-225ENST00000508387 BEGAINQ9BUH8 593 aa16.06■□□□□ 0.16
NR1I3-225ENST00000508387 KIF16BQ96L93 1317 aa16.05■□□□□ 0.16
NR1I3-225ENST00000508387 RBM5P52756 815 aaKnown RBP eCLIP16.05■□□□□ 0.16
NR1I3-225ENST00000508387 MKRN3Q13064 507 aaKnown RBP16.05■□□□□ 0.16
NR1I3-225ENST00000508387 TTLL12Q14166 644 aaPredicted RBP16.05■□□□□ 0.16
NR1I3-225ENST00000508387 APOBEC3FQ8IUX4 373 aaKnown RBP16.05■□□□□ 0.16
NR1I3-225ENST00000508387 MTMR14Q8NCE2 650 aa16.05■□□□□ 0.16
NR1I3-225ENST00000508387 FRAT1Q92837 279 aaPredicted RBP16.05■□□□□ 0.16
NR1I3-225ENST00000508387 VEZTQ9HBM0 779 aa16.05■□□□□ 0.16
NR1I3-225ENST00000508387 TTF2Q9UNY4 1162 aaKnown RBP16.05■□□□□ 0.16
NR1I3-225ENST00000508387 OTOFQ9HC10 1997 aa16.05■□□□□ 0.16
NR1I3-225ENST00000508387 PUM3Q15397 648 aaKnown RBP16.04■□□□□ 0.16
NR1I3-225ENST00000508387 CDAN1Q8IWY9 1227 aa16.04■□□□□ 0.16
NR1I3-225ENST00000508387 CLUAP1Q96AJ1 413 aa16.04■□□□□ 0.16
NR1I3-225ENST00000508387 DEFB129Q9H1M3 183 aa16.04■□□□□ 0.16
NR1I3-225ENST00000508387 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.04■□□□□ 0.16
NR1I3-225ENST00000508387 INTS3Q68E01 1043 aaKnown RBP16.03■□□□□ 0.16
NR1I3-225ENST00000508387 VPS37DQ86XT2 251 aa16.03■□□□□ 0.16
NR1I3-225ENST00000508387 CCDC102AQ96A19 550 aa16.03■□□□□ 0.16
NR1I3-225ENST00000508387 CSRNP1Q96S65 589 aa16.03■□□□□ 0.16
NR1I3-225ENST00000508387 CASP8AP2Q9UKL3 1982 aa16.03■□□□□ 0.16
NR1I3-225ENST00000508387 CRKP46108 304 aa16.02■□□□□ 0.16
NR1I3-225ENST00000508387 MMP14P50281 582 aa16.02■□□□□ 0.16
NR1I3-225ENST00000508387 FKBP1BP68106 108 aa16.02■□□□□ 0.16
NR1I3-225ENST00000508387 CAVIN4Q5BKX8 364 aa16.02■□□□□ 0.16
NR1I3-225ENST00000508387 TDRD3Q9H7E2 651 aaKnown RBP16.02■□□□□ 0.16
NR1I3-225ENST00000508387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.02■□□□□ 0.16
NR1I3-225ENST00000508387 FRAT2O75474 233 aaPredicted RBP16.01■□□□□ 0.15
NR1I3-225ENST00000508387 IFIT1P09914 478 aaKnown RBP16.01■□□□□ 0.15
NR1I3-225ENST00000508387 NBPF12Q5TAG4 269 aaPredicted RBP16.01■□□□□ 0.15
NR1I3-225ENST00000508387 ATF7IPQ6VMQ6 1270 aa16.01■□□□□ 0.15
NR1I3-225ENST00000508387 ARHGAP45Q92619 1136 aa16.01■□□□□ 0.15
NR1I3-225ENST00000508387 ZNF70Q9UC06 446 aaPredicted RBP16.01■□□□□ 0.15
NR1I3-225ENST00000508387 ANGEL1Q9UNK9 670 aaKnown RBP16.01■□□□□ 0.15
NR1I3-225ENST00000508387 AKAP11Q9UKA4 1901 aa16.01■□□□□ 0.15
NR1I3-225ENST00000508387 TRPA1O75762 1119 aa16■□□□□ 0.15
NR1I3-225ENST00000508387 SLC5A1P13866 664 aa16■□□□□ 0.15
NR1I3-225ENST00000508387 ADORA1P30542 326 aa16■□□□□ 0.15
NR1I3-225ENST00000508387 NF2P35240 595 aa16■□□□□ 0.15
NR1I3-225ENST00000508387 CACNB3P54284 484 aa16■□□□□ 0.15
NR1I3-225ENST00000508387 SPDYE2Q495Y8 402 aa16■□□□□ 0.15
NR1I3-225ENST00000508387 DZIP1LQ8IYY4 767 aaKnown RBP16■□□□□ 0.15
NR1I3-225ENST00000508387 RNF186Q9NXI6 227 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms