RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 ASTN2O75129 1339 aaPredicted RBP15.34■□□□□ 0.05
PTPN20-218ENST00000508357 CEP350Q5VT06 3117 aa15.33■□□□□ 0.05
PTPN20-218ENST00000508357 MAP1SQ66K74 1059 aaPredicted RBP15.33■□□□□ 0.04
PTPN20-218ENST00000508357 TTLL5Q6EMB2 1281 aa15.33■□□□□ 0.04
PTPN20-218ENST00000508357 NOP58Q9Y2X3 529 aaKnown RBP15.33■□□□□ 0.04
PTPN20-218ENST00000508357 PASKQ96RG2 1323 aa15.33■□□□□ 0.04
PTPN20-218ENST00000508357 ITGBL1O95965 494 aaPredicted RBP15.32■□□□□ 0.04
PTPN20-218ENST00000508357 IFIT1P09914 478 aaKnown RBP15.32■□□□□ 0.04
PTPN20-218ENST00000508357 HSPA6P17066 643 aa15.32■□□□□ 0.04
PTPN20-218ENST00000508357 PHKA1P46020 1223 aa15.32■□□□□ 0.04
PTPN20-218ENST00000508357 FMR1Q06787 632 aaKnown RBP eCLIP15.32■□□□□ 0.04
PTPN20-218ENST00000508357 GRIK5Q16478 980 aa15.32■□□□□ 0.04
PTPN20-218ENST00000508357 KIF4BQ2VIQ3 1234 aa15.32■□□□□ 0.04
PTPN20-218ENST00000508357 MYO3BQ8WXR4 1341 aa15.32■□□□□ 0.04
PTPN20-218ENST00000508357 A0A1B0GUL7 405 aa15.31■□□□□ 0.04
PTPN20-218ENST00000508357 USP17L8P0C7I0 530 aa15.31■□□□□ 0.04
PTPN20-218ENST00000508357 KIAA0825Q8IV33 1275 aa15.31■□□□□ 0.04
PTPN20-218ENST00000508357 PGAP2Q9UHJ9 254 aa15.31■□□□□ 0.04
PTPN20-218ENST00000508357 EXOC6BQ9Y2D4 811 aa15.31■□□□□ 0.04
PTPN20-218ENST00000508357 H7C1D1 291 aa15.3■□□□□ 0.04
PTPN20-218ENST00000508357 SURF6O75683 361 aaKnown RBP15.3■□□□□ 0.04
PTPN20-218ENST00000508357 TIMM10P62072 90 aa15.3■□□□□ 0.04
PTPN20-218ENST00000508357 FKBP1AP62942 108 aaKnown RBP15.3■□□□□ 0.04
PTPN20-218ENST00000508357 HTRA3P83110 453 aa15.3■□□□□ 0.04
PTPN20-218ENST00000508357 AOX1Q06278 1338 aa15.3■□□□□ 0.04
PTPN20-218ENST00000508357 CHAF1AQ13111 956 aaPredicted RBP15.3■□□□□ 0.04
PTPN20-218ENST00000508357 CAVIN4Q5BKX8 364 aa15.3■□□□□ 0.04
PTPN20-218ENST00000508357 RBM26Q5T8P6 1007 aaKnown RBP15.3■□□□□ 0.04
PTPN20-218ENST00000508357 ZBED3Q96IU2 234 aaPredicted RBP15.3■□□□□ 0.04
PTPN20-218ENST00000508357 CRBNQ96SW2 442 aa15.3■□□□□ 0.04
PTPN20-218ENST00000508357 MYOZ2Q9NPC6 264 aa15.3■□□□□ 0.04
PTPN20-218ENST00000508357 CLEC11AQ9Y240 323 aa15.3■□□□□ 0.04
PTPN20-218ENST00000508357 PCDHAC2Q9Y5I4 1007 aa15.3■□□□□ 0.04
PTPN20-218ENST00000508357 TRAF5O00463 557 aa15.29■□□□□ 0.04
PTPN20-218ENST00000508357 G3BP1Q13283 466 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTPN20-218ENST00000508357 MFSD14BQ5SR56 506 aa15.29■□□□□ 0.04
PTPN20-218ENST00000508357 CCDC102BQ68D86 513 aa15.29■□□□□ 0.04
PTPN20-218ENST00000508357 DLK2Q6UY11 383 aa15.29■□□□□ 0.04
PTPN20-218ENST00000508357 VPS37DQ86XT2 251 aa15.29■□□□□ 0.04
PTPN20-218ENST00000508357 RPAP2Q8IXW5 612 aaPredicted RBP15.29■□□□□ 0.04
PTPN20-218ENST00000508357 CNTROBQ8N137 903 aa15.29■□□□□ 0.04
PTPN20-218ENST00000508357 XAGE2Q96GT9 111 aa15.29■□□□□ 0.04
PTPN20-218ENST00000508357 TLR7Q9NYK1 1049 aaKnown RBP15.29■□□□□ 0.04
PTPN20-218ENST00000508357 GGA3Q9NZ52 723 aa15.29■□□□□ 0.04
PTPN20-218ENST00000508357 ECM29Q5VYK3 1845 aa15.29■□□□□ 0.04
PTPN20-218ENST00000508357 RASGRF1Q13972 1273 aa15.28■□□□□ 0.04
PTPN20-218ENST00000508357 TNNI3KQ59H18 835 aa15.28■□□□□ 0.04
PTPN20-218ENST00000508357 GLIS2Q9BZE0 524 aaPredicted RBP15.28■□□□□ 0.04
PTPN20-218ENST00000508357 FPGT-TNNI3KV9GXZ4 949 aa15.28■□□□□ 0.04
PTPN20-218ENST00000508357 F8W031 263 aaPredicted RBP15.27■□□□□ 0.04
PTPN20-218ENST00000508357 ZBTB22O15209 634 aa15.27■□□□□ 0.04
PTPN20-218ENST00000508357 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
PTPN20-218ENST00000508357 NBPF9Q3BBW0 867 aa15.27■□□□□ 0.04
PTPN20-218ENST00000508357 ZC3H15Q8WU90 426 aaKnown RBP15.27■□□□□ 0.04
PTPN20-218ENST00000508357 GPR108Q9NPR9 543 aa15.27■□□□□ 0.04
PTPN20-218ENST00000508357 AKAP2Q9Y2D5 859 aa15.27■□□□□ 0.04
PTPN20-218ENST00000508357 TRPM7Q96QT4 1865 aa15.27■□□□□ 0.03
PTPN20-218ENST00000508357 AKAP11Q9UKA4 1901 aa15.26■□□□□ 0.03
PTPN20-218ENST00000508357 ADM5C9JUS6 153 aa15.26■□□□□ 0.03
PTPN20-218ENST00000508357 WNT10BO00744 389 aa15.26■□□□□ 0.03
PTPN20-218ENST00000508357 APLP1P51693 650 aa15.26■□□□□ 0.03
PTPN20-218ENST00000508357 OS9Q13438 667 aaPredicted RBP15.26■□□□□ 0.03
PTPN20-218ENST00000508357 SCARF1Q14162 830 aa15.26■□□□□ 0.03
PTPN20-218ENST00000508357 DBNDD2Q9BQY9 259 aa15.26■□□□□ 0.03
PTPN20-218ENST00000508357 PCDHB15Q9Y5E8 787 aa15.26■□□□□ 0.03
PTPN20-218ENST00000508357 POLR2AP24928 1970 aaKnown RBP15.25■□□□□ 0.03
PTPN20-218ENST00000508357 ANGEL2Q5VTE6 544 aaKnown RBP15.25■□□□□ 0.03
PTPN20-218ENST00000508357 PI16Q6UXB8 463 aa15.25■□□□□ 0.03
PTPN20-218ENST00000508357 EAF2Q96CJ1 260 aaPredicted RBP15.25■□□□□ 0.03
PTPN20-218ENST00000508357 CHMP4BQ9H444 224 aaKnown RBP15.25■□□□□ 0.03
PTPN20-218ENST00000508357 DBNLQ9UJU6 430 aaKnown RBP15.25■□□□□ 0.03
PTPN20-218ENST00000508357 SCAF8Q9UPN6 1271 aaKnown RBP15.25■□□□□ 0.03
PTPN20-218ENST00000508357 PDS5AQ29RF7 1337 aaKnown RBP15.24■□□□□ 0.03
PTPN20-218ENST00000508357 FRAT2O75474 233 aaPredicted RBP15.24■□□□□ 0.03
PTPN20-218ENST00000508357 ARID4AP29374 1257 aaPredicted RBP15.24■□□□□ 0.03
PTPN20-218ENST00000508357 PRDX5P30044 214 aa15.24■□□□□ 0.03
PTPN20-218ENST00000508357 CFAP100Q494V2 611 aa15.24■□□□□ 0.03
PTPN20-218ENST00000508357 OGFOD1Q8N543 542 aa15.24■□□□□ 0.03
PTPN20-218ENST00000508357 MTMR14Q8NCE2 650 aa15.24■□□□□ 0.03
PTPN20-218ENST00000508357 RHPN1Q8TCX5 695 aa15.24■□□□□ 0.03
PTPN20-218ENST00000508357 NEUROD6Q96NK8 337 aa15.24■□□□□ 0.03
PTPN20-218ENST00000508357 MAST2Q6P0Q8 1798 aa15.24■□□□□ 0.03
PTPN20-218ENST00000508357 SALL1Q9NSC2 1324 aa15.23■□□□□ 0.03
PTPN20-218ENST00000508357 SPDYE2BA6NHP3 402 aa15.23■□□□□ 0.03
PTPN20-218ENST00000508357 SEMA3EO15041 775 aa15.23■□□□□ 0.03
PTPN20-218ENST00000508357 HMMRO75330 724 aa15.23■□□□□ 0.03
PTPN20-218ENST00000508357 SPDYE6P0CI01 402 aa15.23■□□□□ 0.03
PTPN20-218ENST00000508357 KRT26Q7Z3Y9 468 aa15.23■□□□□ 0.03
PTPN20-218ENST00000508357 USP48Q86UV5 1035 aa15.23■□□□□ 0.03
PTPN20-218ENST00000508357 TBC1D22AQ8WUA7 517 aa15.23■□□□□ 0.03
PTPN20-218ENST00000508357 CCDC8Q9H0W5 538 aaPredicted RBP15.23■□□□□ 0.03
PTPN20-218ENST00000508357 IL1RAPL2Q9NP60 686 aa15.23■□□□□ 0.03
PTPN20-218ENST00000508357 HMG20BQ9P0W2 317 aa15.23■□□□□ 0.03
PTPN20-218ENST00000508357 HDAC9Q9UKV0 1011 aa15.23■□□□□ 0.03
PTPN20-218ENST00000508357 TTF2Q9UNY4 1162 aaKnown RBP15.23■□□□□ 0.03
PTPN20-218ENST00000508357 SUPT16HQ9Y5B9 1047 aaKnown RBP15.23■□□□□ 0.03
PTPN20-218ENST00000508357 PITPNM2Q9BZ72 1349 aa15.22■□□□□ 0.03
PTPN20-218ENST00000508357 APBB1O00213 710 aa15.22■□□□□ 0.03
PTPN20-218ENST00000508357 MCAMP43121 646 aa15.22■□□□□ 0.03
PTPN20-218ENST00000508357 CST9Q5W186 159 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms