RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 RAPGEFL1Q9UHV5 662 aa7.87□□□□□ -1.15
VEGFC-201ENST00000507638 HACL1Q9UJ83 578 aa7.87□□□□□ -1.15
VEGFC-201ENST00000507638 TRPM7Q96QT4 1865 aa7.87□□□□□ -1.15
VEGFC-201ENST00000507638 ADH1AP07327 375 aa7.86□□□□□ -1.15
VEGFC-201ENST00000507638 BMP2P12643 396 aa7.86□□□□□ -1.15
VEGFC-201ENST00000507638 ITGAEP38570 1179 aa7.86□□□□□ -1.15
VEGFC-201ENST00000507638 ERVK-9P63128 1117 aa7.86□□□□□ -1.15
VEGFC-201ENST00000507638 USP4Q13107 963 aa7.86□□□□□ -1.15
VEGFC-201ENST00000507638 CYP2U1Q7Z449 544 aa7.86□□□□□ -1.15
VEGFC-201ENST00000507638 PNMA8AQ86V59 439 aaPredicted RBP7.86□□□□□ -1.15
VEGFC-201ENST00000507638 TTLL6Q8N841 843 aa7.86□□□□□ -1.15
VEGFC-201ENST00000507638 SMARCC1Q92922 1105 aaPredicted RBP7.86□□□□□ -1.15
VEGFC-201ENST00000507638 GMPR2Q9P2T1 348 aaKnown RBP7.86□□□□□ -1.15
VEGFC-201ENST00000507638 TRPA1O75762 1119 aa7.85□□□□□ -1.15
VEGFC-201ENST00000507638 PLA2G5P39877 138 aa7.85□□□□□ -1.15
VEGFC-201ENST00000507638 TRIM46Q7Z4K8 759 aa7.85□□□□□ -1.15
VEGFC-201ENST00000507638 SAPCD2Q86UD0 394 aa7.85□□□□□ -1.15
VEGFC-201ENST00000507638 RNF135Q8IUD6 432 aa7.85□□□□□ -1.15
VEGFC-201ENST00000507638 NPAS3Q8IXF0 933 aa7.85□□□□□ -1.15
VEGFC-201ENST00000507638 FAM122AQ96E09 287 aa7.85□□□□□ -1.15
VEGFC-201ENST00000507638 ZFP42Q96MM3 310 aa7.85□□□□□ -1.15
VEGFC-201ENST00000507638 RTCBQ9Y3I0 505 aaKnown RBP7.85□□□□□ -1.15
VEGFC-201ENST00000507638 PCDHB11Q9Y5F2 797 aa7.85□□□□□ -1.15
VEGFC-201ENST00000507638 ADAMTSL1Q8N6G6 1762 aa7.84□□□□□ -1.15
VEGFC-201ENST00000507638 TRAF5O00463 557 aa7.84□□□□□ -1.15
VEGFC-201ENST00000507638 SPINT1O43278 529 aa7.84□□□□□ -1.15
VEGFC-201ENST00000507638 RFC4P35249 363 aa7.84□□□□□ -1.15
VEGFC-201ENST00000507638 RAB15P59190 212 aa7.84□□□□□ -1.15
VEGFC-201ENST00000507638 PKN2Q16513 984 aaKnown RBP7.84□□□□□ -1.15
VEGFC-201ENST00000507638 AKAP4Q5JQC9 854 aa7.84□□□□□ -1.15
VEGFC-201ENST00000507638 ALG2Q9H553 416 aa7.84□□□□□ -1.15
VEGFC-201ENST00000507638 DACH1Q9UI36 760 aa7.84□□□□□ -1.15
VEGFC-201ENST00000507638 LOC102724428A0A0B4J2F2 783 aa7.83□□□□□ -1.16
VEGFC-201ENST00000507638 LILRA1O75019 489 aa7.83□□□□□ -1.16
VEGFC-201ENST00000507638 BMP1P13497 986 aa7.83□□□□□ -1.16
VEGFC-201ENST00000507638 SIK1P57059 783 aa7.83□□□□□ -1.16
VEGFC-201ENST00000507638 ITPK1Q13572 414 aa7.83□□□□□ -1.16
VEGFC-201ENST00000507638 SYNE4Q8N205 404 aa7.83□□□□□ -1.16
VEGFC-201ENST00000507638 PHTF2Q8N3S3 785 aa7.83□□□□□ -1.16
VEGFC-201ENST00000507638 POM121Q96HA1 1249 aa7.83□□□□□ -1.16
VEGFC-201ENST00000507638 SNX27Q96L92 541 aa7.83□□□□□ -1.16
VEGFC-201ENST00000507638 PURBQ96QR8 312 aaKnown RBP7.83□□□□□ -1.16
VEGFC-201ENST00000507638 RNF186Q9NXI6 227 aa7.83□□□□□ -1.16
VEGFC-201ENST00000507638 DOLKQ9UPQ8 538 aa7.83□□□□□ -1.16
VEGFC-201ENST00000507638 AKAP11Q9UKA4 1901 aa7.83□□□□□ -1.16
VEGFC-201ENST00000507638 ATP5J2-PTCD1G3V325 749 aa7.82□□□□□ -1.16
VEGFC-201ENST00000507638 H0YGN5 161 aa7.82□□□□□ -1.16
VEGFC-201ENST00000507638 C21orf2O43822 256 aa7.82□□□□□ -1.16
VEGFC-201ENST00000507638 GPC1P35052 558 aa7.82□□□□□ -1.16
VEGFC-201ENST00000507638 DDR1Q08345 913 aa7.82□□□□□ -1.16
VEGFC-201ENST00000507638 NOGQ13253 232 aa7.82□□□□□ -1.16
VEGFC-201ENST00000507638 SAGE1Q9NXZ1 904 aa7.82□□□□□ -1.16
VEGFC-201ENST00000507638 CEP290O15078 2479 aa7.81□□□□□ -1.16
VEGFC-201ENST00000507638 MAN1A2O60476 641 aa7.81□□□□□ -1.16
VEGFC-201ENST00000507638 GNRH1P01148 92 aa7.81□□□□□ -1.16
VEGFC-201ENST00000507638 PTGIRP43119 386 aa7.81□□□□□ -1.16
VEGFC-201ENST00000507638 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.81□□□□□ -1.16
VEGFC-201ENST00000507638 LTV1Q96GA3 475 aaPredicted RBP7.81□□□□□ -1.16
VEGFC-201ENST00000507638 HHIPL1Q96JK4 782 aa7.81□□□□□ -1.16
VEGFC-201ENST00000507638 CYLDQ9NQC7 956 aa7.81□□□□□ -1.16
VEGFC-201ENST00000507638 TMPRSS4Q9NRS4 437 aa7.81□□□□□ -1.16
VEGFC-201ENST00000507638 CABP1Q9NZU7 370 aa7.81□□□□□ -1.16
VEGFC-201ENST00000507638 HDAC9Q9UKV0 1011 aa7.81□□□□□ -1.16
VEGFC-201ENST00000507638 FER1L6Q2WGJ9 1857 aa7.81□□□□□ -1.16
VEGFC-201ENST00000507638 UNC80Q8N2C7 3258 aa7.81□□□□□ -1.16
VEGFC-201ENST00000507638 RNF123Q5XPI4 1314 aa7.8□□□□□ -1.16
VEGFC-201ENST00000507638 TTLL8A6PVC2 850 aa7.8□□□□□ -1.16
VEGFC-201ENST00000507638 TRAK2O60296 914 aa7.8□□□□□ -1.16
VEGFC-201ENST00000507638 CELF2O95319 508 aaKnown RBP7.8□□□□□ -1.16
VEGFC-201ENST00000507638 CBLBQ13191 982 aa7.8□□□□□ -1.16
VEGFC-201ENST00000507638 BICDL1Q6ZP65 573 aa7.8□□□□□ -1.16
VEGFC-201ENST00000507638 KIAA0100Q14667 2235 aaKnown RBP7.8□□□□□ -1.16
VEGFC-201ENST00000507638 MAP2P11137 1827 aaKnown RBP7.8□□□□□ -1.16
VEGFC-201ENST00000507638 SRPK2P78362 688 aaKnown RBP7.79□□□□□ -1.16
VEGFC-201ENST00000507638 C6orf118Q5T5N4 469 aa7.79□□□□□ -1.16
VEGFC-201ENST00000507638 C2CD5Q86YS7 1000 aa7.79□□□□□ -1.16
VEGFC-201ENST00000507638 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.79□□□□□ -1.16
VEGFC-201ENST00000507638 PIGBQ92521 554 aa7.79□□□□□ -1.16
VEGFC-201ENST00000507638 ITGB4P16144 1822 aa7.79□□□□□ -1.16
VEGFC-201ENST00000507638 H0YIN7 160 aa7.78□□□□□ -1.16
VEGFC-201ENST00000507638 POLRMTO00411 1230 aaKnown RBP7.78□□□□□ -1.16
VEGFC-201ENST00000507638 EN2P19622 333 aaPredicted RBP7.78□□□□□ -1.16
VEGFC-201ENST00000507638 KIF23Q02241 960 aaPredicted RBP7.78□□□□□ -1.16
VEGFC-201ENST00000507638 EML3Q32P44 896 aa7.78□□□□□ -1.16
VEGFC-201ENST00000507638 FBXO46Q6PJ61 603 aaPredicted RBP7.78□□□□□ -1.16
VEGFC-201ENST00000507638 PLPP7Q8NBV4 271 aa7.78□□□□□ -1.16
VEGFC-201ENST00000507638 NLRP3Q96P20 1036 aa7.78□□□□□ -1.16
VEGFC-201ENST00000507638 CCDC85AQ96PX6 553 aaPredicted RBP7.78□□□□□ -1.16
VEGFC-201ENST00000507638 TAOK3Q9H2K8 898 aa7.78□□□□□ -1.16
VEGFC-201ENST00000507638 SRP68Q9UHB9 627 aaKnown RBP7.78□□□□□ -1.16
VEGFC-201ENST00000507638 ADGRB1O14514 1584 aa7.78□□□□□ -1.16
VEGFC-201ENST00000507638 NFAT5O94916 1531 aa7.78□□□□□ -1.16
VEGFC-201ENST00000507638 TTC21BQ7Z4L5 1316 aa7.78□□□□□ -1.16
VEGFC-201ENST00000507638 ZNF541Q9H0D2 1346 aa7.78□□□□□ -1.16
VEGFC-201ENST00000507638 PAPPA2Q9BXP8 1791 aa7.77□□□□□ -1.17
VEGFC-201ENST00000507638 RPS6KA4O75676 772 aa7.77□□□□□ -1.17
VEGFC-201ENST00000507638 SNRPBP14678 240 aaKnown RBP7.77□□□□□ -1.17
VEGFC-201ENST00000507638 TM4SF1P30408 202 aa7.77□□□□□ -1.17
VEGFC-201ENST00000507638 ADD1P35611 737 aaKnown RBP7.77□□□□□ -1.17
VEGFC-201ENST00000507638 RELBQ01201 579 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms