RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 USP17L4A6NCW7 530 aa7.46□□□□□ -1.22
GYPB-208ENST00000507009 CHL1O00533 1208 aa7.46□□□□□ -1.22
GYPB-208ENST00000507009 HOXB1P14653 301 aaPredicted RBP7.46□□□□□ -1.22
GYPB-208ENST00000507009 NF2P35240 595 aa7.46□□□□□ -1.22
GYPB-208ENST00000507009 ZNF280AP59817 542 aaPredicted RBP7.46□□□□□ -1.22
GYPB-208ENST00000507009 CCDC152Q4G0S7 254 aa7.46□□□□□ -1.22
GYPB-208ENST00000507009 DUSP27Q5VZP5 1158 aa7.46□□□□□ -1.22
GYPB-208ENST00000507009 USP17L1Q7RTZ2 530 aa7.46□□□□□ -1.22
GYPB-208ENST00000507009 ZBTB38Q8NAP3 1195 aaPredicted RBP7.46□□□□□ -1.22
GYPB-208ENST00000507009 AGBL3Q8NEM8 1001 aa7.46□□□□□ -1.22
GYPB-208ENST00000507009 PODXL2Q9NZ53 605 aa7.46□□□□□ -1.22
GYPB-208ENST00000507009 FZD1Q9UP38 647 aa7.46□□□□□ -1.22
GYPB-208ENST00000507009 PSME4Q14997 1843 aa7.45□□□□□ -1.22
GYPB-208ENST00000507009 GPR25O00155 361 aa7.45□□□□□ -1.22
GYPB-208ENST00000507009 STK25O00506 426 aa7.45□□□□□ -1.22
GYPB-208ENST00000507009 PDE8AO60658 829 aa7.45□□□□□ -1.22
GYPB-208ENST00000507009 ATP2B4P23634 1241 aa7.45□□□□□ -1.22
GYPB-208ENST00000507009 FKBP1BP68106 108 aa7.45□□□□□ -1.22
GYPB-208ENST00000507009 MMRN1Q13201 1228 aa7.45□□□□□ -1.22
GYPB-208ENST00000507009 PKN2Q16513 984 aaKnown RBP7.45□□□□□ -1.22
GYPB-208ENST00000507009 OGFOD1Q8N543 542 aa7.45□□□□□ -1.22
GYPB-208ENST00000507009 XDHP47989 1333 aa7.45□□□□□ -1.22
GYPB-208ENST00000507009 FKTNO75072 461 aa7.44□□□□□ -1.22
GYPB-208ENST00000507009 HSP90B1P14625 803 aaKnown RBP7.44□□□□□ -1.22
GYPB-208ENST00000507009 PTPN12Q05209 780 aaKnown RBP7.44□□□□□ -1.22
GYPB-208ENST00000507009 SREBF2Q12772 1141 aa7.44□□□□□ -1.22
GYPB-208ENST00000507009 FBXO46Q6PJ61 603 aaPredicted RBP7.44□□□□□ -1.22
GYPB-208ENST00000507009 ARMC9Q7Z3E5 817 aa7.44□□□□□ -1.22
GYPB-208ENST00000507009 KIAA0825Q8IV33 1275 aa7.44□□□□□ -1.22
GYPB-208ENST00000507009 FBXO22Q8NEZ5 403 aa7.44□□□□□ -1.22
GYPB-208ENST00000507009 RUNDC1Q96C34 613 aa7.44□□□□□ -1.22
GYPB-208ENST00000507009 KRTAP3-3Q9BYR6 98 aa7.44□□□□□ -1.22
GYPB-208ENST00000507009 KRTAP3-2Q9BYR7 98 aa7.44□□□□□ -1.22
GYPB-208ENST00000507009 R3HDMLQ9H3Y0 253 aa7.44□□□□□ -1.22
GYPB-208ENST00000507009 MBIPQ9NS73 344 aa7.44□□□□□ -1.22
GYPB-208ENST00000507009 CWC25Q9NXE8 425 aaPredicted RBP7.44□□□□□ -1.22
GYPB-208ENST00000507009 ANGEL1Q9UNK9 670 aaKnown RBP7.44□□□□□ -1.22
GYPB-208ENST00000507009 PITPNM2Q9BZ72 1349 aa7.44□□□□□ -1.22
GYPB-208ENST00000507009 WNT10BO00744 389 aa7.43□□□□□ -1.22
GYPB-208ENST00000507009 PCCAP05165 728 aaPredicted RBP7.43□□□□□ -1.22
GYPB-208ENST00000507009 CTSWP56202 376 aa7.43□□□□□ -1.22
GYPB-208ENST00000507009 TRIM28Q13263 835 aaKnown RBP7.43□□□□□ -1.22
GYPB-208ENST00000507009 DACT2Q5SW24 774 aa7.43□□□□□ -1.22
GYPB-208ENST00000507009 PODNQ7Z5L7 613 aa7.43□□□□□ -1.22
GYPB-208ENST00000507009 CCDC191Q8NCU4 936 aa7.43□□□□□ -1.22
GYPB-208ENST00000507009 GMLQ99445 158 aa7.43□□□□□ -1.22
GYPB-208ENST00000507009 CDC5LQ99459 802 aaKnown RBP7.43□□□□□ -1.22
GYPB-208ENST00000507009 TRIM17Q9Y577 477 aa7.43□□□□□ -1.22
GYPB-208ENST00000507009 F8W031 263 aaPredicted RBP7.42□□□□□ -1.22
GYPB-208ENST00000507009 DDX58O95786 925 aaKnown RBP7.42□□□□□ -1.22
GYPB-208ENST00000507009 HOXB7P09629 217 aa7.42□□□□□ -1.22
GYPB-208ENST00000507009 KCNJ4P48050 445 aa7.42□□□□□ -1.22
GYPB-208ENST00000507009 TM4SF4P48230 202 aa7.42□□□□□ -1.22
GYPB-208ENST00000507009 CCT4P50991 539 aaKnown RBP7.42□□□□□ -1.22
GYPB-208ENST00000507009 GTF2IP78347 998 aa7.42□□□□□ -1.22
GYPB-208ENST00000507009 TXNRD3Q86VQ6 643 aa7.42□□□□□ -1.22
GYPB-208ENST00000507009 SLC10A4Q96EP9 437 aa7.42□□□□□ -1.22
GYPB-208ENST00000507009 CLMNQ96JQ2 1002 aa7.42□□□□□ -1.22
GYPB-208ENST00000507009 MFRPQ9BY79 579 aa7.42□□□□□ -1.22
GYPB-208ENST00000507009 GREM2Q9H772 168 aa7.42□□□□□ -1.22
GYPB-208ENST00000507009 MINPP1Q9UNW1 487 aa7.42□□□□□ -1.22
GYPB-208ENST00000507009 MAP3K2Q9Y2U5 619 aa7.42□□□□□ -1.22
GYPB-208ENST00000507009 MED23Q9ULK4 1368 aa7.42□□□□□ -1.22
GYPB-208ENST00000507009 MYH3P11055 1940 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 CLRN2A0PK11 232 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 MYCP01106 439 aaPredicted RBP7.41□□□□□ -1.22
GYPB-208ENST00000507009 KLRK1P26718 216 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 IGHMBP2P38935 993 aaKnown RBP7.41□□□□□ -1.22
GYPB-208ENST00000507009 DDX10Q13206 875 aaKnown RBP7.41□□□□□ -1.22
GYPB-208ENST00000507009 RALBP1Q15311 655 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 DLGAP5Q15398 846 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 SPRYD7Q5W111 196 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 TTLL5Q6EMB2 1281 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 APOBEC3FQ8IUX4 373 aaKnown RBP7.41□□□□□ -1.22
GYPB-208ENST00000507009 CD99L2Q8TCZ2 262 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 GCC1Q96CN9 775 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 METTL22Q9BUU2 404 aaPredicted RBP7.41□□□□□ -1.22
GYPB-208ENST00000507009 VEZTQ9HBM0 779 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 JAG2Q9Y219 1238 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 MYBBP1AQ9BQG0 1328 aaKnown RBP7.41□□□□□ -1.22
GYPB-208ENST00000507009 ZNF609O15014 1411 aa7.41□□□□□ -1.22
GYPB-208ENST00000507009 ZNF646O15015 1829 aaPredicted RBP7.41□□□□□ -1.22
GYPB-208ENST00000507009 PI4KAP2A4QPH2 592 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 RBM5P52756 815 aaKnown RBP eCLIP7.4□□□□□ -1.22
GYPB-208ENST00000507009 NEXNQ0ZGT2 675 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 CWF19L2Q2TBE0 894 aaKnown RBP7.4□□□□□ -1.22
GYPB-208ENST00000507009 HABP4Q5JVS0 413 aaKnown RBP7.4□□□□□ -1.22
GYPB-208ENST00000507009 STRIP1Q5VSL9 837 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 CCDC30Q5VVM6 783 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 OTOP1Q7RTM1 612 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 UBE3BQ7Z3V4 1068 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 PI4KAP1Q8N8J0 262 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 C8orf58Q8NAV2 365 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 TTLL11Q8NHH1 800 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 MPHOSPH8Q99549 860 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 COA1Q9GZY4 146 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 DEFB129Q9H1M3 183 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 BSDC1Q9NW68 430 aaPredicted RBP7.4□□□□□ -1.22
GYPB-208ENST00000507009 PCDHAC2Q9Y5I4 1007 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms