RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 CNTROBQ8N137 903 aa23.92■■□□□ 1.42
LMNA-221ENST00000506981 ZC3H15Q8WU90 426 aaKnown RBP23.92■■□□□ 1.42
LMNA-221ENST00000506981 MMP14P50281 582 aa23.91■■□□□ 1.42
LMNA-221ENST00000506981 FKBP1AP62942 108 aaKnown RBP23.91■■□□□ 1.42
LMNA-221ENST00000506981 JAG2Q9Y219 1238 aa23.91■■□□□ 1.42
LMNA-221ENST00000506981 FAM205AQ6ZU69 1335 aa23.9■■□□□ 1.42
LMNA-221ENST00000506981 SURF6O75683 361 aaKnown RBP23.9■■□□□ 1.42
LMNA-221ENST00000506981 BCAMP50895 628 aa23.9■■□□□ 1.42
LMNA-221ENST00000506981 RRP1P56182 461 aaKnown RBP23.9■■□□□ 1.42
LMNA-221ENST00000506981 TFCP2Q12800 502 aa23.9■■□□□ 1.42
LMNA-221ENST00000506981 KIAA0825Q8IV33 1275 aa23.9■■□□□ 1.42
LMNA-221ENST00000506981 MYOZ2Q9NPC6 264 aa23.9■■□□□ 1.42
LMNA-221ENST00000506981 IQSEC3Q9UPP2 1182 aaPredicted RBP23.9■■□□□ 1.42
LMNA-221ENST00000506981 HIRAP54198 1017 aaPredicted RBP23.89■■□□□ 1.41
LMNA-221ENST00000506981 CHAF1AQ13111 956 aaPredicted RBP23.89■■□□□ 1.41
LMNA-221ENST00000506981 ZBTB40Q9NUA8 1239 aa23.89■■□□□ 1.41
LMNA-221ENST00000506981 GNL3LQ9NVN8 582 aaKnown RBP23.89■■□□□ 1.41
LMNA-221ENST00000506981 HMMRO75330 724 aa23.88■■□□□ 1.41
LMNA-221ENST00000506981 MFSD14BQ5SR56 506 aa23.88■■□□□ 1.41
LMNA-221ENST00000506981 A0A1B0GUL7 405 aa23.87■■□□□ 1.41
LMNA-221ENST00000506981 EGFRP00533 1210 aa23.87■■□□□ 1.41
LMNA-221ENST00000506981 RPAP2Q8IXW5 612 aaPredicted RBP23.87■■□□□ 1.41
LMNA-221ENST00000506981 TBC1D22AQ8WUA7 517 aa23.87■■□□□ 1.41
LMNA-221ENST00000506981 DCPSQ96C86 337 aaKnown RBP23.87■■□□□ 1.41
LMNA-221ENST00000506981 PGAP2Q9UHJ9 254 aa23.87■■□□□ 1.41
LMNA-221ENST00000506981 PASKQ96RG2 1323 aa23.86■■□□□ 1.41
LMNA-221ENST00000506981 F8W031 263 aaPredicted RBP23.86■■□□□ 1.41
LMNA-221ENST00000506981 ITGBL1O95965 494 aaPredicted RBP23.86■■□□□ 1.41
LMNA-221ENST00000506981 CERS5Q8N5B7 392 aa23.86■■□□□ 1.41
LMNA-221ENST00000506981 NEUROD6Q96NK8 337 aa23.86■■□□□ 1.41
LMNA-221ENST00000506981 CDC37L1Q7L3B6 337 aa23.85■■□□□ 1.41
LMNA-221ENST00000506981 NOP58Q9Y2X3 529 aaKnown RBP23.85■■□□□ 1.41
LMNA-221ENST00000506981 TIMM10P62072 90 aa23.84■■□□□ 1.41
LMNA-221ENST00000506981 HSP90AB4PQ58FF6 505 aa23.84■■□□□ 1.41
LMNA-221ENST00000506981 GORABQ5T7V8 394 aa23.84■■□□□ 1.41
LMNA-221ENST00000506981 GGA3Q9NZ52 723 aa23.84■■□□□ 1.41
LMNA-221ENST00000506981 ADORA1P30542 326 aa23.83■■□□□ 1.41
LMNA-221ENST00000506981 SCARF1Q14162 830 aa23.83■■□□□ 1.41
LMNA-221ENST00000506981 ERC1Q8IUD2 1116 aa23.83■■□□□ 1.41
LMNA-221ENST00000506981 XAGE2Q96GT9 111 aa23.83■■□□□ 1.41
LMNA-221ENST00000506981 GLIS2Q9BZE0 524 aaPredicted RBP23.83■■□□□ 1.41
LMNA-221ENST00000506981 SEMA3EO15041 775 aa23.82■■□□□ 1.4
LMNA-221ENST00000506981 PHKA1P46020 1223 aa23.82■■□□□ 1.4
LMNA-221ENST00000506981 DLGAP5Q15398 846 aa23.82■■□□□ 1.4
LMNA-221ENST00000506981 KRT26Q7Z3Y9 468 aa23.82■■□□□ 1.4
LMNA-221ENST00000506981 SULF1Q8IWU6 871 aa23.82■■□□□ 1.4
LMNA-221ENST00000506981 WDR66Q8TBY9 1149 aa23.82■■□□□ 1.4
LMNA-221ENST00000506981 DENND2AQ9ULE3 1009 aa23.82■■□□□ 1.4
LMNA-221ENST00000506981 TTF2Q9UNY4 1162 aaKnown RBP23.82■■□□□ 1.4
LMNA-221ENST00000506981 TMEM88BA6NKF7 163 aa23.81■■□□□ 1.4
LMNA-221ENST00000506981 ANGEL2Q5VTE6 544 aaKnown RBP23.81■■□□□ 1.4
LMNA-221ENST00000506981 CCDC102BQ68D86 513 aa23.81■■□□□ 1.4
LMNA-221ENST00000506981 GPR108Q9NPR9 543 aa23.81■■□□□ 1.4
LMNA-221ENST00000506981 CREBZFQ9NS37 354 aa23.81■■□□□ 1.4
LMNA-221ENST00000506981 EXOC6BQ9Y2D4 811 aa23.81■■□□□ 1.4
LMNA-221ENST00000506981 PITPNM2Q9BZ72 1349 aa23.81■■□□□ 1.4
LMNA-221ENST00000506981 TRAF5O00463 557 aa23.8■■□□□ 1.4
LMNA-221ENST00000506981 WNT10BO00744 389 aa23.8■■□□□ 1.4
LMNA-221ENST00000506981 RBM5P52756 815 aaKnown RBP eCLIP23.8■■□□□ 1.4
LMNA-221ENST00000506981 TNNI3KQ59H18 835 aa23.8■■□□□ 1.4
LMNA-221ENST00000506981 USP48Q86UV5 1035 aa23.8■■□□□ 1.4
LMNA-221ENST00000506981 FPGT-TNNI3KV9GXZ4 949 aa23.8■■□□□ 1.4
LMNA-221ENST00000506981 MAST3O60307 1309 aa23.8■■□□□ 1.4
LMNA-221ENST00000506981 MYH2Q9UKX2 1941 aa23.79■■□□□ 1.4
LMNA-221ENST00000506981 HTRA3P83110 453 aa23.79■■□□□ 1.4
LMNA-221ENST00000506981 NBPF9Q3BBW0 867 aa23.79■■□□□ 1.4
LMNA-221ENST00000506981 CFAP100Q494V2 611 aa23.79■■□□□ 1.4
LMNA-221ENST00000506981 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.79■■□□□ 1.4
LMNA-221ENST00000506981 COL1A1P02452 1464 aaPredicted RBP23.79■■□□□ 1.4
LMNA-221ENST00000506981 ASTN2O75129 1339 aaPredicted RBP23.79■■□□□ 1.4
LMNA-221ENST00000506981 MYO1BO43795 1136 aa23.78■■□□□ 1.4
LMNA-221ENST00000506981 MTMR14Q8NCE2 650 aa23.78■■□□□ 1.4
LMNA-221ENST00000506981 SUGT1Q9Y2Z0 365 aa23.78■■□□□ 1.4
LMNA-221ENST00000506981 ZGPATQ8N5A5 531 aaKnown RBP23.77■■□□□ 1.4
LMNA-221ENST00000506981 ZNF408Q9H9D4 720 aa23.77■■□□□ 1.4
LMNA-221ENST00000506981 SERPINA10Q9UK55 444 aa23.77■■□□□ 1.4
LMNA-221ENST00000506981 ADM5C9JUS6 153 aa23.76■■□□□ 1.39
LMNA-221ENST00000506981 ZBTB22O15209 634 aa23.76■■□□□ 1.39
LMNA-221ENST00000506981 FMR1Q06787 632 aaKnown RBP eCLIP23.76■■□□□ 1.39
LMNA-221ENST00000506981 APOBEC3FQ8IUX4 373 aaKnown RBP23.76■■□□□ 1.39
LMNA-221ENST00000506981 AKAP11Q9UKA4 1901 aa23.76■■□□□ 1.39
LMNA-221ENST00000506981 CELF2O95319 508 aaKnown RBP23.75■■□□□ 1.39
LMNA-221ENST00000506981 UQCRFS1P1P0C7P4 283 aa23.75■■□□□ 1.39
LMNA-221ENST00000506981 RASGRF1Q13972 1273 aa23.75■■□□□ 1.39
LMNA-221ENST00000506981 CCDC158Q5M9N0 1113 aa23.75■■□□□ 1.39
LMNA-221ENST00000506981 SIRT2Q8IXJ6 389 aa23.75■■□□□ 1.39
LMNA-221ENST00000506981 ZBED3Q96IU2 234 aaPredicted RBP23.75■■□□□ 1.39
LMNA-221ENST00000506981 ABT1Q9ULW3 272 aaKnown RBP23.75■■□□□ 1.39
LMNA-221ENST00000506981 PDS5AQ29RF7 1337 aaKnown RBP23.75■■□□□ 1.39
LMNA-221ENST00000506981 SPDYE2BA6NHP3 402 aa23.74■■□□□ 1.39
LMNA-221ENST00000506981 SPDYE6P0CI01 402 aa23.74■■□□□ 1.39
LMNA-221ENST00000506981 CRKP46108 304 aa23.74■■□□□ 1.39
LMNA-221ENST00000506981 HDLBPQ00341 1268 aaKnown RBP23.74■■□□□ 1.39
LMNA-221ENST00000506981 TTC39AQ5SRH9 613 aa23.74■■□□□ 1.39
LMNA-221ENST00000506981 TEKT1Q969V4 418 aa23.74■■□□□ 1.39
LMNA-221ENST00000506981 KIF1BPQ96EK5 621 aa23.74■■□□□ 1.39
LMNA-221ENST00000506981 CRBNQ96SW2 442 aa23.74■■□□□ 1.39
LMNA-221ENST00000506981 SALL1Q9NSC2 1324 aa23.74■■□□□ 1.39
LMNA-221ENST00000506981 APBB1O00213 710 aa23.73■■□□□ 1.39
LMNA-221ENST00000506981 RAB11FIP3O75154 756 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms