RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 GLIS2Q9BZE0 524 aaPredicted RBP24.59■■□□□ 1.53
SNX25-204ENST00000506896 MYO3BQ8WXR4 1341 aa24.59■■□□□ 1.53
SNX25-204ENST00000506896 HMMRO75330 724 aa24.58■■□□□ 1.53
SNX25-204ENST00000506896 ATP2B3Q16720 1220 aa24.58■■□□□ 1.53
SNX25-204ENST00000506896 RBM26Q5T8P6 1007 aaKnown RBP24.58■■□□□ 1.53
SNX25-204ENST00000506896 TTLL5Q6EMB2 1281 aa24.58■■□□□ 1.53
SNX25-204ENST00000506896 CDC37L1Q7L3B6 337 aa24.58■■□□□ 1.53
SNX25-204ENST00000506896 AKAP2Q9Y2D5 859 aa24.58■■□□□ 1.53
SNX25-204ENST00000506896 CNTNAP1P78357 1384 aa24.57■■□□□ 1.52
SNX25-204ENST00000506896 SURF6O75683 361 aaKnown RBP24.57■■□□□ 1.52
SNX25-204ENST00000506896 USP17L8P0C7I0 530 aa24.57■■□□□ 1.52
SNX25-204ENST00000506896 GYG1P46976 350 aa24.57■■□□□ 1.52
SNX25-204ENST00000506896 FBXO33Q7Z6M2 555 aa24.57■■□□□ 1.52
SNX25-204ENST00000506896 MXD3Q9BW11 206 aa24.57■■□□□ 1.52
SNX25-204ENST00000506896 MKRN1Q9UHC7 482 aaKnown RBP24.57■■□□□ 1.52
SNX25-204ENST00000506896 NOP58Q9Y2X3 529 aaKnown RBP24.57■■□□□ 1.52
SNX25-204ENST00000506896 SASH1O94885 1247 aa24.56■■□□□ 1.52
SNX25-204ENST00000506896 KIF4BQ2VIQ3 1234 aa24.56■■□□□ 1.52
SNX25-204ENST00000506896 TDRD7Q8NHU6 1098 aaKnown RBP24.56■■□□□ 1.52
SNX25-204ENST00000506896 FBXW7Q969H0 707 aa24.56■■□□□ 1.52
SNX25-204ENST00000506896 RASSF10A6NK89 507 aa24.55■■□□□ 1.52
SNX25-204ENST00000506896 GTF2IP78347 998 aa24.55■■□□□ 1.52
SNX25-204ENST00000506896 TFCP2Q12800 502 aa24.55■■□□□ 1.52
SNX25-204ENST00000506896 OS9Q13438 667 aaPredicted RBP24.55■■□□□ 1.52
SNX25-204ENST00000506896 MMP14P50281 582 aa24.54■■□□□ 1.52
SNX25-204ENST00000506896 HSP90AB4PQ58FF6 505 aa24.54■■□□□ 1.52
SNX25-204ENST00000506896 USP48Q86UV5 1035 aa24.54■■□□□ 1.52
SNX25-204ENST00000506896 MYOZ2Q9NPC6 264 aa24.54■■□□□ 1.52
SNX25-204ENST00000506896 FKBP1AP62942 108 aaKnown RBP24.53■■□□□ 1.52
SNX25-204ENST00000506896 DEFB115Q30KQ5 88 aa24.53■■□□□ 1.52
SNX25-204ENST00000506896 FAM205AQ6ZU69 1335 aa24.53■■□□□ 1.52
SNX25-204ENST00000506896 BCAMP50895 628 aa24.52■■□□□ 1.52
SNX25-204ENST00000506896 SCARF1Q14162 830 aa24.52■■□□□ 1.52
SNX25-204ENST00000506896 ERC1Q8IUD2 1116 aa24.52■■□□□ 1.52
SNX25-204ENST00000506896 A0A1B0GUL7 405 aa24.51■■□□□ 1.51
SNX25-204ENST00000506896 FRAT2O75474 233 aaPredicted RBP24.51■■□□□ 1.51
SNX25-204ENST00000506896 VEGFBP49765 207 aa24.51■■□□□ 1.51
SNX25-204ENST00000506896 DLK2Q6UY11 383 aa24.51■■□□□ 1.51
SNX25-204ENST00000506896 DCPSQ96C86 337 aaKnown RBP24.51■■□□□ 1.51
SNX25-204ENST00000506896 GPR108Q9NPR9 543 aa24.51■■□□□ 1.51
SNX25-204ENST00000506896 GNL3LQ9NVN8 582 aaKnown RBP24.51■■□□□ 1.51
SNX25-204ENST00000506896 ASTN2O75129 1339 aaPredicted RBP24.51■■□□□ 1.51
SNX25-204ENST00000506896 CELF2O95319 508 aaKnown RBP24.5■■□□□ 1.51
SNX25-204ENST00000506896 KRT26Q7Z3Y9 468 aa24.5■■□□□ 1.51
SNX25-204ENST00000506896 SIRT2Q8IXJ6 389 aa24.5■■□□□ 1.51
SNX25-204ENST00000506896 OGFOD1Q8N543 542 aa24.5■■□□□ 1.51
SNX25-204ENST00000506896 ABT1Q9ULW3 272 aaKnown RBP24.5■■□□□ 1.51
SNX25-204ENST00000506896 TLL2Q9Y6L7 1015 aa24.5■■□□□ 1.51
SNX25-204ENST00000506896 ARAP2Q8WZ64 1704 aa24.49■■□□□ 1.51
SNX25-204ENST00000506896 ZBTB22O15209 634 aa24.49■■□□□ 1.51
SNX25-204ENST00000506896 TIMM10P62072 90 aa24.49■■□□□ 1.51
SNX25-204ENST00000506896 CERS5Q8N5B7 392 aa24.49■■□□□ 1.51
SNX25-204ENST00000506896 GGA3Q9NZ52 723 aa24.49■■□□□ 1.51
SNX25-204ENST00000506896 AAMPQ13685 434 aa24.48■■□□□ 1.51
SNX25-204ENST00000506896 TBC1D22AQ8WUA7 517 aa24.48■■□□□ 1.51
SNX25-204ENST00000506896 CRBNQ96SW2 442 aa24.48■■□□□ 1.51
SNX25-204ENST00000506896 HDAC9Q9UKV0 1011 aa24.48■■□□□ 1.51
SNX25-204ENST00000506896 ADM5C9JUS6 153 aa24.47■■□□□ 1.51
SNX25-204ENST00000506896 SEMA3EO15041 775 aa24.47■■□□□ 1.51
SNX25-204ENST00000506896 NBPF9Q3BBW0 867 aa24.47■■□□□ 1.51
SNX25-204ENST00000506896 SAPCD2Q86UD0 394 aa24.47■■□□□ 1.51
SNX25-204ENST00000506896 KIAA0825Q8IV33 1275 aa24.47■■□□□ 1.51
SNX25-204ENST00000506896 XAGE2Q96GT9 111 aa24.47■■□□□ 1.51
SNX25-204ENST00000506896 NEUROD6Q96NK8 337 aa24.47■■□□□ 1.51
SNX25-204ENST00000506896 EXOC6BQ9Y2D4 811 aa24.47■■□□□ 1.51
SNX25-204ENST00000506896 SUPT16HQ9Y5B9 1047 aaKnown RBP24.47■■□□□ 1.51
SNX25-204ENST00000506896 PITPNM2Q9BZ72 1349 aa24.46■■□□□ 1.51
SNX25-204ENST00000506896 WNT10BO00744 389 aa24.46■■□□□ 1.51
SNX25-204ENST00000506896 TNNI3KQ59H18 835 aa24.46■■□□□ 1.51
SNX25-204ENST00000506896 MFSD14BQ5SR56 506 aa24.46■■□□□ 1.51
SNX25-204ENST00000506896 ANGEL2Q5VTE6 544 aaKnown RBP24.46■■□□□ 1.51
SNX25-204ENST00000506896 CCDC102BQ68D86 513 aa24.46■■□□□ 1.51
SNX25-204ENST00000506896 ZBED3Q96IU2 234 aaPredicted RBP24.46■■□□□ 1.51
SNX25-204ENST00000506896 IQSEC3Q9UPP2 1182 aaPredicted RBP24.46■■□□□ 1.51
SNX25-204ENST00000506896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.46■■□□□ 1.51
SNX25-204ENST00000506896 FPGT-TNNI3KV9GXZ4 949 aa24.46■■□□□ 1.51
SNX25-204ENST00000506896 ADORA1P30542 326 aa24.45■■□□□ 1.5
SNX25-204ENST00000506896 SULF1Q8IWU6 871 aa24.45■■□□□ 1.5
SNX25-204ENST00000506896 WDR33Q9C0J8 1336 aaKnown RBP24.44■■□□□ 1.5
SNX25-204ENST00000506896 RAB11FIP3O75154 756 aa24.44■■□□□ 1.5
SNX25-204ENST00000506896 PHKA1P46020 1223 aa24.44■■□□□ 1.5
SNX25-204ENST00000506896 GORABQ5T7V8 394 aa24.44■■□□□ 1.5
SNX25-204ENST00000506896 HHIPL1Q96JK4 782 aa24.44■■□□□ 1.5
SNX25-204ENST00000506896 ZNF408Q9H9D4 720 aa24.44■■□□□ 1.5
SNX25-204ENST00000506896 DENND2AQ9ULE3 1009 aa24.44■■□□□ 1.5
SNX25-204ENST00000506896 JAG2Q9Y219 1238 aa24.44■■□□□ 1.5
SNX25-204ENST00000506896 CHAF1AQ13111 956 aaPredicted RBP24.43■■□□□ 1.5
SNX25-204ENST00000506896 MTMR14Q8NCE2 650 aa24.43■■□□□ 1.5
SNX25-204ENST00000506896 WDR66Q8TBY9 1149 aa24.43■■□□□ 1.5
SNX25-204ENST00000506896 KIF1BPQ96EK5 621 aa24.43■■□□□ 1.5
SNX25-204ENST00000506896 SUGT1Q9Y2Z0 365 aa24.43■■□□□ 1.5
SNX25-204ENST00000506896 MYH13Q9UKX3 1938 aa24.42■■□□□ 1.5
SNX25-204ENST00000506896 HSPA1AP0DMV8 641 aaKnown RBP24.42■■□□□ 1.5
SNX25-204ENST00000506896 HSPA1BP0DMV9 641 aaKnown RBP24.42■■□□□ 1.5
SNX25-204ENST00000506896 RHPN1Q8TCX5 695 aa24.42■■□□□ 1.5
SNX25-204ENST00000506896 PDS5AQ29RF7 1337 aaKnown RBP24.41■■□□□ 1.5
SNX25-204ENST00000506896 CYP4F22Q6NT55 531 aa24.41■■□□□ 1.5
SNX25-204ENST00000506896 CAPNS2Q96L46 248 aa24.41■■□□□ 1.5
SNX25-204ENST00000506896 CDCA5Q96FF9 252 aa24.4■■□□□ 1.5
SNX25-204ENST00000506896 F8W031 263 aaPredicted RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms