RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 ATP6V0A2Q9Y487 856 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 RBM8AQ9Y5S9 174 aaKnown RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 NCKAP5LQ9HCH0 1330 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 KIAA0100Q14667 2235 aaKnown RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 BIRC3Q13489 604 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 BIRC2Q13490 618 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 TSTA3Q13630 321 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 RTN1Q16799 776 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 NAA16Q6N069 864 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 CASC4Q6P4E1 433 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 RPAP2Q8IXW5 612 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 BANK1Q8NDB2 785 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 RNF34Q969K3 372 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 ZNF594Q96JF6 807 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 ECHDC1Q9NTX5 307 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 POLKQ9UBT6 870 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 DBF4Q9UBU7 674 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 AFG3L2Q9Y4W6 797 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 PCDHB15Q9Y5E8 787 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 BZW2Q9Y6E2 419 aaKnown RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 AK9Q5TCS8 1911 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 NAIPQ13075 1403 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 AQRO60306 1485 aaKnown RBP eCLIP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 COBLO75128 1261 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 FCHSD2O94868 740 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 MYCLP12524 364 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 SAT1P21673 171 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 RFC1P35251 1148 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 PTPN21Q16825 1174 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 CCDC122Q5T0U0 273 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 WDR63Q8IWG1 891 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 NCOA7Q8NI08 942 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 TBC1D5Q92609 795 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 NAA15Q9BXJ9 866 aaKnown RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 SPDYE3A6NKU9 549 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 TXNDC9O14530 226 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 TAF5LO75529 589 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 SEC24BO95487 1268 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 ARID4AP29374 1257 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 MCM5P33992 734 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 GABPAQ06546 454 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 SMARCC2Q8TAQ2 1214 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 UHMK1Q8TAS1 419 aaKnown RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 CDC5LQ99459 802 aaKnown RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 SFMBT1Q9UHJ3 866 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 STK24Q9Y6E0 443 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 CACNA1BQ00975 2339 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 VASPP50552 380 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 SATB1Q01826 763 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 PPP1R7Q15435 360 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 STX1AQ16623 288 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 Q3C1V9 767 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 CCDC155Q8N6L0 562 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 JAKMIP2Q96AA8 810 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 KIFC2Q96AC6 838 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 TACO1Q9BSH4 297 aaKnown RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 NACA2Q9H009 215 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 GBP3Q9H0R5 595 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 AGTPBP1Q9UPW5 1226 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 NOD1Q9Y239 953 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 NBPF7P0C2Y1 421 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 AMPD3Q01432 767 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 LRMPQ12912 555 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 POLA2Q14181 598 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 SPOUT1Q5T280 376 aaKnown RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 TMTC4Q5T4D3 741 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 UTP14CQ5TAP6 766 aaKnown RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 MSL1Q68DK7 614 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 SPECC1LQ69YQ0 1117 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 DYMQ7RTS9 669 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 BBXQ8WY36 941 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 CHAMP1Q96JM3 812 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 NLRP3Q96P20 1036 aa2.88□□□□□ -1.95
ITGA1-204ENST00000506275 NAP1L3Q99457 506 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-204ENST00000506275 SPDYE16A6NNV3 312 aaPredicted RBP2.87□□□□□ -1.95
ITGA1-204ENST00000506275 RFX1P22670 979 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 HSPA4P34932 840 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 GTF2A1P52655 376 aaPredicted RBP2.87□□□□□ -1.95
ITGA1-204ENST00000506275 SPDYE2Q495Y8 402 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 ANKRD24Q8TF21 1146 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 PHKBQ93100 1093 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 CCDC42Q96M95 316 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 IMPG2Q9BZV3 1241 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 RNF41Q9H4P4 317 aaPredicted RBP2.87□□□□□ -1.95
ITGA1-204ENST00000506275 FAM169AQ9Y6X4 670 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 CFTRP13569 1480 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 PRRC2BQ5JSZ5 2229 aaKnown RBP2.87□□□□□ -1.95
ITGA1-204ENST00000506275 SYNJ2BP-COX16A0A087WUM0 186 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 B4E1Z4 1266 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 TRAF5O00463 557 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 CLGNO14967 610 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 KRT19P08727 400 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 KCNQ4P56696 695 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 UBE2HP62256 183 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 CKAP4Q07065 602 aaKnown RBP2.87□□□□□ -1.95
ITGA1-204ENST00000506275 KIF5AQ12840 1032 aa2.87□□□□□ -1.95
ITGA1-204ENST00000506275 NKX1-1Q15270 411 aaPredicted RBP2.87□□□□□ -1.95
ITGA1-204ENST00000506275 FAM182BQ5T319 152 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms