RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 HMMRO75330 724 aa20.63■□□□□ 0.89
SNCA-209ENST00000506244 RRP1P56182 461 aaKnown RBP20.63■□□□□ 0.89
SNCA-209ENST00000506244 TBC1D22AQ8WUA7 517 aa20.63■□□□□ 0.89
SNCA-209ENST00000506244 ZBTB40Q9NUA8 1239 aa20.63■□□□□ 0.89
SNCA-209ENST00000506244 MYH13Q9UKX3 1938 aa20.63■□□□□ 0.89
SNCA-209ENST00000506244 PASKQ96RG2 1323 aa20.62■□□□□ 0.89
SNCA-209ENST00000506244 HIRAP54198 1017 aaPredicted RBP20.62■□□□□ 0.89
SNCA-209ENST00000506244 TFCP2Q12800 502 aa20.62■□□□□ 0.89
SNCA-209ENST00000506244 MFSD14BQ5SR56 506 aa20.62■□□□□ 0.89
SNCA-209ENST00000506244 RBM26Q5T8P6 1007 aaKnown RBP20.62■□□□□ 0.89
SNCA-209ENST00000506244 C20orf194Q5TEA3 1177 aa20.62■□□□□ 0.89
SNCA-209ENST00000506244 KIAA0825Q8IV33 1275 aa20.62■□□□□ 0.89
SNCA-209ENST00000506244 RPAP2Q8IXW5 612 aaPredicted RBP20.62■□□□□ 0.89
SNCA-209ENST00000506244 MXD3Q9BW11 206 aa20.62■□□□□ 0.89
SNCA-209ENST00000506244 PGAP2Q9UHJ9 254 aa20.62■□□□□ 0.89
SNCA-209ENST00000506244 SURF6O75683 361 aaKnown RBP20.61■□□□□ 0.89
SNCA-209ENST00000506244 ITGBL1O95965 494 aaPredicted RBP20.61■□□□□ 0.89
SNCA-209ENST00000506244 BCAMP50895 628 aa20.61■□□□□ 0.89
SNCA-209ENST00000506244 A0A1B0GUL7 405 aa20.6■□□□□ 0.89
SNCA-209ENST00000506244 SEMA3EO15041 775 aa20.6■□□□□ 0.89
SNCA-209ENST00000506244 HSP90AB4PQ58FF6 505 aa20.6■□□□□ 0.89
SNCA-209ENST00000506244 ERC1Q8IUD2 1116 aa20.6■□□□□ 0.89
SNCA-209ENST00000506244 CERS5Q8N5B7 392 aa20.6■□□□□ 0.89
SNCA-209ENST00000506244 DCPSQ96C86 337 aaKnown RBP20.6■□□□□ 0.89
SNCA-209ENST00000506244 NOP58Q9Y2X3 529 aaKnown RBP20.6■□□□□ 0.89
SNCA-209ENST00000506244 EGFRP00533 1210 aa20.59■□□□□ 0.89
SNCA-209ENST00000506244 CHAF1AQ13111 956 aaPredicted RBP20.59■□□□□ 0.89
SNCA-209ENST00000506244 CDC37L1Q7L3B6 337 aa20.59■□□□□ 0.89
SNCA-209ENST00000506244 GGA3Q9NZ52 723 aa20.59■□□□□ 0.89
SNCA-209ENST00000506244 IQSEC3Q9UPP2 1182 aaPredicted RBP20.59■□□□□ 0.89
SNCA-209ENST00000506244 JAG2Q9Y219 1238 aa20.59■□□□□ 0.89
SNCA-209ENST00000506244 PITPNM2Q9BZ72 1349 aa20.58■□□□□ 0.89
SNCA-209ENST00000506244 ZBTB22O15209 634 aa20.58■□□□□ 0.89
SNCA-209ENST00000506244 WDR66Q8TBY9 1149 aa20.58■□□□□ 0.89
SNCA-209ENST00000506244 GPR108Q9NPR9 543 aa20.58■□□□□ 0.89
SNCA-209ENST00000506244 CREBZFQ9NS37 354 aa20.58■□□□□ 0.89
SNCA-209ENST00000506244 MAST3O60307 1309 aa20.57■□□□□ 0.88
SNCA-209ENST00000506244 SCARF1Q14162 830 aa20.57■□□□□ 0.88
SNCA-209ENST00000506244 GORABQ5T7V8 394 aa20.57■□□□□ 0.88
SNCA-209ENST00000506244 KRT26Q7Z3Y9 468 aa20.57■□□□□ 0.88
SNCA-209ENST00000506244 SULF1Q8IWU6 871 aa20.57■□□□□ 0.88
SNCA-209ENST00000506244 DENND2AQ9ULE3 1009 aa20.57■□□□□ 0.88
SNCA-209ENST00000506244 SUGT1Q9Y2Z0 365 aa20.57■□□□□ 0.88
SNCA-209ENST00000506244 F8W031 263 aaPredicted RBP20.56■□□□□ 0.88
SNCA-209ENST00000506244 DLGAP5Q15398 846 aa20.56■□□□□ 0.88
SNCA-209ENST00000506244 CCDC102BQ68D86 513 aa20.56■□□□□ 0.88
SNCA-209ENST00000506244 XAGE2Q96GT9 111 aa20.56■□□□□ 0.88
SNCA-209ENST00000506244 NEUROD6Q96NK8 337 aa20.56■□□□□ 0.88
SNCA-209ENST00000506244 GLIS2Q9BZE0 524 aaPredicted RBP20.56■□□□□ 0.88
SNCA-209ENST00000506244 TRPM7Q96QT4 1865 aa20.56■□□□□ 0.88
SNCA-209ENST00000506244 PDS5AQ29RF7 1337 aaKnown RBP20.55■□□□□ 0.88
SNCA-209ENST00000506244 TMEM88BA6NKF7 163 aa20.55■□□□□ 0.88
SNCA-209ENST00000506244 MYO1BO43795 1136 aa20.55■□□□□ 0.88
SNCA-209ENST00000506244 ADORA1P30542 326 aa20.55■□□□□ 0.88
SNCA-209ENST00000506244 PHKA1P46020 1223 aa20.55■□□□□ 0.88
SNCA-209ENST00000506244 TIMM10P62072 90 aa20.55■□□□□ 0.88
SNCA-209ENST00000506244 ANGEL2Q5VTE6 544 aaKnown RBP20.55■□□□□ 0.88
SNCA-209ENST00000506244 MTMR14Q8NCE2 650 aa20.55■□□□□ 0.88
SNCA-209ENST00000506244 TTF2Q9UNY4 1162 aaKnown RBP20.55■□□□□ 0.88
SNCA-209ENST00000506244 WNT10BO00744 389 aa20.54■□□□□ 0.88
SNCA-209ENST00000506244 TNNI3KQ59H18 835 aa20.54■□□□□ 0.88
SNCA-209ENST00000506244 ZGPATQ8N5A5 531 aaKnown RBP20.54■□□□□ 0.88
SNCA-209ENST00000506244 SERPINA10Q9UK55 444 aa20.54■□□□□ 0.88
SNCA-209ENST00000506244 FPGT-TNNI3KV9GXZ4 949 aa20.54■□□□□ 0.88
SNCA-209ENST00000506244 COL1A1P02452 1464 aaPredicted RBP20.54■□□□□ 0.88
SNCA-209ENST00000506244 ECM29Q5VYK3 1845 aa20.53■□□□□ 0.88
SNCA-209ENST00000506244 APOBEC3FQ8IUX4 373 aaKnown RBP20.53■□□□□ 0.88
SNCA-209ENST00000506244 EXOC6BQ9Y2D4 811 aa20.53■□□□□ 0.88
SNCA-209ENST00000506244 SALL1Q9NSC2 1324 aa20.53■□□□□ 0.88
SNCA-209ENST00000506244 TRAF5O00463 557 aa20.52■□□□□ 0.88
SNCA-209ENST00000506244 RBM5P52756 815 aaKnown RBP eCLIP20.52■□□□□ 0.88
SNCA-209ENST00000506244 HDLBPQ00341 1268 aaKnown RBP20.52■□□□□ 0.88
SNCA-209ENST00000506244 NBPF9Q3BBW0 867 aa20.52■□□□□ 0.88
SNCA-209ENST00000506244 CFAP100Q494V2 611 aa20.52■□□□□ 0.88
SNCA-209ENST00000506244 USP48Q86UV5 1035 aa20.52■□□□□ 0.88
SNCA-209ENST00000506244 ZBED3Q96IU2 234 aaPredicted RBP20.52■□□□□ 0.88
SNCA-209ENST00000506244 SPDYE2BA6NHP3 402 aa20.51■□□□□ 0.87
SNCA-209ENST00000506244 UQCRFS1P1P0C7P4 283 aa20.51■□□□□ 0.87
SNCA-209ENST00000506244 SPDYE6P0CI01 402 aa20.51■□□□□ 0.87
SNCA-209ENST00000506244 ASTN2O75129 1339 aaPredicted RBP20.51■□□□□ 0.87
SNCA-209ENST00000506244 ADM5C9JUS6 153 aa20.5■□□□□ 0.87
SNCA-209ENST00000506244 RAB11FIP3O75154 756 aa20.5■□□□□ 0.87
SNCA-209ENST00000506244 CELF2O95319 508 aaKnown RBP20.5■□□□□ 0.87
SNCA-209ENST00000506244 ARID4AP29374 1257 aaPredicted RBP20.5■□□□□ 0.87
SNCA-209ENST00000506244 RASGRF1Q13972 1273 aa20.5■□□□□ 0.87
SNCA-209ENST00000506244 CCDC158Q5M9N0 1113 aa20.5■□□□□ 0.87
SNCA-209ENST00000506244 SIRT2Q8IXJ6 389 aa20.5■□□□□ 0.87
SNCA-209ENST00000506244 TEKT1Q969V4 418 aa20.5■□□□□ 0.87
SNCA-209ENST00000506244 KIF1BPQ96EK5 621 aa20.5■□□□□ 0.87
SNCA-209ENST00000506244 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.5■□□□□ 0.87
SNCA-209ENST00000506244 CRKP46108 304 aa20.49■□□□□ 0.87
SNCA-209ENST00000506244 HTRA3P83110 453 aa20.49■□□□□ 0.87
SNCA-209ENST00000506244 TTC39AQ5SRH9 613 aa20.49■□□□□ 0.87
SNCA-209ENST00000506244 ZNF408Q9H9D4 720 aa20.49■□□□□ 0.87
SNCA-209ENST00000506244 ABT1Q9ULW3 272 aaKnown RBP20.49■□□□□ 0.87
SNCA-209ENST00000506244 LDHBP07195 334 aaKnown RBP20.48■□□□□ 0.87
SNCA-209ENST00000506244 AAMPQ13685 434 aa20.48■□□□□ 0.87
SNCA-209ENST00000506244 SPTY2D1Q68D10 685 aaPredicted RBP20.48■□□□□ 0.87
SNCA-209ENST00000506244 RHPN1Q8TCX5 695 aa20.48■□□□□ 0.87
SNCA-209ENST00000506244 KLRG1Q96E93 195 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms