RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 FAM135AQ9P2D6 1515 aa5.89□□□□□ -1.47
MATR3-211ENST00000505625 PDE6BP35913 854 aa5.89□□□□□ -1.47
MATR3-211ENST00000505625 NEK4P51957 841 aa5.89□□□□□ -1.47
MATR3-211ENST00000505625 DALRD3Q5D0E6 543 aaKnown RBP5.89□□□□□ -1.47
MATR3-211ENST00000505625 SEPT14Q6ZU15 432 aa5.89□□□□□ -1.47
MATR3-211ENST00000505625 MRRFQ96E11 262 aaKnown RBP5.89□□□□□ -1.47
MATR3-211ENST00000505625 FNBP1Q96RU3 617 aa5.89□□□□□ -1.47
MATR3-211ENST00000505625 TCP11L1Q9NUJ3 509 aa5.89□□□□□ -1.47
MATR3-211ENST00000505625 ARGLU1Q9NWB6 273 aaPredicted RBP5.89□□□□□ -1.47
MATR3-211ENST00000505625 ERBB3P21860 1342 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 MAP3K7O43318 606 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 SCNN1DP51172 638 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 FAM180AQ6UWF9 173 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 ATRIPQ8WXE1 791 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 TBC1D31Q96DN5 1066 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 MMS19Q96T76 1030 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 IPO11Q9UI26 975 aaKnown RBP5.88□□□□□ -1.47
MATR3-211ENST00000505625 MAGED2Q9UNF1 606 aaPredicted RBP5.88□□□□□ -1.47
MATR3-211ENST00000505625 SSFA2P28290 1259 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 HOXD10P28358 340 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 PNMA8AQ86V59 439 aaPredicted RBP5.88□□□□□ -1.47
MATR3-211ENST00000505625 CDAN1Q8IWY9 1227 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 IFNL2Q8IZJ0 200 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 HOOK2Q96ED9 719 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 KRT23Q9C075 422 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 TNMDQ9H2S6 317 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 SMARCA5O60264 1052 aaPredicted RBP5.88□□□□□ -1.47
MATR3-211ENST00000505625 NSMFQ6X4W1 530 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 USP37Q86T82 979 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 ERMNQ8TAM6 284 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 EXOC1Q9NV70 894 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 FSD2A1L4K1 749 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 TESPA1A2RU30 521 aaPredicted RBP5.88□□□□□ -1.47
MATR3-211ENST00000505625 FGFR1OPO95684 399 aaKnown RBP5.88□□□□□ -1.47
MATR3-211ENST00000505625 PDE4DQ08499 809 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 SPATA24Q86W54 205 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 ANO4Q32M45 955 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 EEPD1Q7L9B9 569 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 LUZP1Q86V48 1076 aa5.88□□□□□ -1.47
MATR3-211ENST00000505625 RRP36Q96EU6 259 aaKnown RBP5.88□□□□□ -1.47
MATR3-211ENST00000505625 NAP1L4Q99733 375 aaKnown RBP5.88□□□□□ -1.47
MATR3-211ENST00000505625 IL2RBP14784 551 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 MICU3Q86XE3 530 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 ANKRD35Q8N283 1001 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 AS3MTQ9HBK9 375 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.87□□□□□ -1.47
MATR3-211ENST00000505625 MYBBP1AQ9BQG0 1328 aaKnown RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 TYW5A2RUC4 315 aaKnown RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 ALDH1B1P30837 517 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 CCT4P50991 539 aaKnown RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 LARP1BQ659C4 914 aaKnown RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 NBPF11Q86T75 865 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 CCDC125Q86Z20 511 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 MMTAG2Q9BU76 263 aaKnown RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 METTL14Q9HCE5 456 aaKnown RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 PARP2Q9UGN5 583 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 N4BP1O75113 896 aaKnown RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 PRR29P0C7W0 189 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 CCT6AP40227 531 aaKnown RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 BLOC1S2Q6QNY1 142 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 ADAT2Q7Z6V5 191 aaKnown RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 PSPC1Q8WXF1 523 aaKnown RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 IFT74Q96LB3 600 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 NUCKS1Q9H1E3 243 aaKnown RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 SLC12A5Q9H2X9 1139 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 DCAF17Q5H9S7 520 aaPredicted RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 TEX13AQ9BXU3 409 aaPredicted RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 BICRAQ9NZM4 1560 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 GMNNO75496 209 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 PABPC4Q13310 644 aaKnown RBP eCLIP5.87□□□□□ -1.471e-13■■■■■ 30.6
MATR3-211ENST00000505625 LONRF3Q496Y0 759 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 UBE3BQ7Z3V4 1068 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 SZRD1Q7Z422 152 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 CLCA2Q9UQC9 943 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 U3KPZ7 1027 aaPredicted RBP5.87□□□□□ -1.47
MATR3-211ENST00000505625 RAD50Q92878 1312 aa5.87□□□□□ -1.47
MATR3-211ENST00000505625 SYNJ1O43426 1573 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 ANXA1P04083 346 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 EN1Q05925 392 aaPredicted RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 MVPQ14764 893 aaKnown RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 ANKRD1Q15327 319 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 TICAM2Q86XR7 235 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 NUP62CLQ9H1M0 184 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 RNF41Q9H4P4 317 aaPredicted RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 SH2D4AQ9H788 454 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 ZHX1Q9UKY1 873 aaPredicted RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 CD109Q6YHK3 1445 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 GOLGA6L7A0A1B0GV03 622 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 EXOSC9Q06265 439 aaKnown RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 TAF7Q15545 349 aaPredicted RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 AEBP1Q8IUX7 1158 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 TEX11Q8IYF3 940 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 ERLEC1Q96DZ1 483 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 CFAP57Q96MR6 1250 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 HAUS2Q9NVX0 235 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 GCOM1H8Y6P7 765 aaPredicted RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 MAP3K13O43283 966 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 KIAA0754O94854 1291 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 MYZAPP0CAP1 466 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 ARL4DP49703 201 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms