RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 TTLL11Q8NHH1 800 aa19.74■□□□□ 0.75
PDCD6-203ENST00000505526 SASH1O94885 1247 aa19.73■□□□□ 0.75
PDCD6-203ENST00000505526 COA1Q9GZY4 146 aa19.73■□□□□ 0.75
PDCD6-203ENST00000505526 GREM2Q9H772 168 aa19.73■□□□□ 0.75
PDCD6-203ENST00000505526 IRX6P78412 446 aaPredicted RBP19.73■□□□□ 0.75
PDCD6-203ENST00000505526 PTPN12Q05209 780 aaKnown RBP19.73■□□□□ 0.75
PDCD6-203ENST00000505526 PRKG1Q13976 671 aa19.73■□□□□ 0.75
PDCD6-203ENST00000505526 ARMC9Q7Z3E5 817 aa19.73■□□□□ 0.75
PDCD6-203ENST00000505526 ZNF646O15015 1829 aaPredicted RBP19.72■□□□□ 0.75
PDCD6-203ENST00000505526 FKTNO75072 461 aa19.72■□□□□ 0.75
PDCD6-203ENST00000505526 IGKV5-2P06315 115 aa19.72■□□□□ 0.75
PDCD6-203ENST00000505526 MMP14P50281 582 aa19.72■□□□□ 0.75
PDCD6-203ENST00000505526 TXNRD3Q86VQ6 643 aa19.72■□□□□ 0.75
PDCD6-203ENST00000505526 TMEM57Q8N5G2 664 aa19.72■□□□□ 0.75
PDCD6-203ENST00000505526 CFHR5Q9BXR6 569 aa19.72■□□□□ 0.75
PDCD6-203ENST00000505526 R3HDMLQ9H3Y0 253 aa19.71■□□□□ 0.75
PDCD6-203ENST00000505526 SPEF2Q9C093 1822 aa19.71■□□□□ 0.75
PDCD6-203ENST00000505526 NEXNQ0ZGT2 675 aa19.7■□□□□ 0.74
PDCD6-203ENST00000505526 TTLL5Q6EMB2 1281 aa19.7■□□□□ 0.74
PDCD6-203ENST00000505526 APOBEC3FQ8IUX4 373 aaKnown RBP19.7■□□□□ 0.74
PDCD6-203ENST00000505526 LEMD3Q9Y2U8 911 aa19.7■□□□□ 0.74
PDCD6-203ENST00000505526 BEND3Q5T5X7 828 aa19.69■□□□□ 0.74
PDCD6-203ENST00000505526 LDLRAD1Q5T700 205 aa19.69■□□□□ 0.74
PDCD6-203ENST00000505526 SPRYD7Q5W111 196 aa19.69■□□□□ 0.74
PDCD6-203ENST00000505526 INTS3Q68E01 1043 aaKnown RBP19.69■□□□□ 0.74
PDCD6-203ENST00000505526 KIAA0825Q8IV33 1275 aa19.69■□□□□ 0.74
PDCD6-203ENST00000505526 ITPRIPQ8IWB1 547 aa19.69■□□□□ 0.74
PDCD6-203ENST00000505526 COG6Q9Y2V7 657 aa19.69■□□□□ 0.74
PDCD6-203ENST00000505526 SRCIN1Q9C0H9 1055 aa19.68■□□□□ 0.74
PDCD6-203ENST00000505526 ANGEL1Q9UNK9 670 aaKnown RBP19.68■□□□□ 0.74
PDCD6-203ENST00000505526 ALDH1A1P00352 501 aa19.67■□□□□ 0.74
PDCD6-203ENST00000505526 NEFLP07196 543 aa19.67■□□□□ 0.74
PDCD6-203ENST00000505526 IGHMBP2P38935 993 aaKnown RBP19.67■□□□□ 0.74
PDCD6-203ENST00000505526 CWF19L2Q2TBE0 894 aaKnown RBP19.67■□□□□ 0.74
PDCD6-203ENST00000505526 LINS1Q8NG48 757 aa19.67■□□□□ 0.74
PDCD6-203ENST00000505526 ZBED3Q96IU2 234 aaPredicted RBP19.67■□□□□ 0.74
PDCD6-203ENST00000505526 MYH3P11055 1940 aa19.67■□□□□ 0.74
PDCD6-203ENST00000505526 ZNF804BA4D1E1 1349 aa19.67■□□□□ 0.74
PDCD6-203ENST00000505526 KLRK1P26718 216 aa19.67■□□□□ 0.74
PDCD6-203ENST00000505526 GTF2IP78347 998 aa19.67■□□□□ 0.74
PDCD6-203ENST00000505526 MVPQ14764 893 aaKnown RBP19.67■□□□□ 0.74
PDCD6-203ENST00000505526 CRBNQ96SW2 442 aa19.67■□□□□ 0.74
PDCD6-203ENST00000505526 ANKRD2Q9GZV1 360 aa19.67■□□□□ 0.74
PDCD6-203ENST00000505526 FZD1Q9UP38 647 aa19.67■□□□□ 0.74
PDCD6-203ENST00000505526 NEURL1BA8MQ27 555 aa19.66■□□□□ 0.74
PDCD6-203ENST00000505526 UBE3BQ7Z3V4 1068 aa19.66■□□□□ 0.74
PDCD6-203ENST00000505526 SLC10A4Q96EP9 437 aa19.66■□□□□ 0.74
PDCD6-203ENST00000505526 MANSC4A6NHS7 340 aaPredicted RBP19.65■□□□□ 0.74
PDCD6-203ENST00000505526 H7C1W4 665 aa19.65■□□□□ 0.74
PDCD6-203ENST00000505526 INHBEP58166 350 aa19.65■□□□□ 0.74
PDCD6-203ENST00000505526 DEFB129Q9H1M3 183 aa19.65■□□□□ 0.74
PDCD6-203ENST00000505526 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.65■□□□□ 0.74
PDCD6-203ENST00000505526 COL1A1P02452 1464 aaPredicted RBP19.64■□□□□ 0.74
PDCD6-203ENST00000505526 ALDH1L1O75891 902 aa19.64■□□□□ 0.73
PDCD6-203ENST00000505526 ITGA6P23229 1130 aa19.64■□□□□ 0.73
PDCD6-203ENST00000505526 IFNL1Q8IU54 200 aa19.64■□□□□ 0.73
PDCD6-203ENST00000505526 MPHOSPH8Q99549 860 aa19.64■□□□□ 0.73
PDCD6-203ENST00000505526 TRIM17Q9Y577 477 aa19.64■□□□□ 0.73
PDCD6-203ENST00000505526 DLGAP5Q15398 846 aa19.63■□□□□ 0.73
PDCD6-203ENST00000505526 GCC1Q96CN9 775 aa19.63■□□□□ 0.73
PDCD6-203ENST00000505526 DDX19BQ9UMR2 479 aa19.63■□□□□ 0.73
PDCD6-203ENST00000505526 KCNJ4P48050 445 aa19.62■□□□□ 0.73
PDCD6-203ENST00000505526 MAP3K11Q16584 847 aa19.62■□□□□ 0.73
PDCD6-203ENST00000505526 EXOC6Q8TAG9 804 aa19.62■□□□□ 0.73
PDCD6-203ENST00000505526 CD209Q9NNX6 404 aa19.62■□□□□ 0.73
PDCD6-203ENST00000505526 ZBTB48P10074 688 aaPredicted RBP19.61■□□□□ 0.73
PDCD6-203ENST00000505526 GCKRQ14397 625 aa19.61■□□□□ 0.73
PDCD6-203ENST00000505526 OTOP1Q7RTM1 612 aa19.61■□□□□ 0.73
PDCD6-203ENST00000505526 WNK4Q96J92 1243 aa19.61■□□□□ 0.73
PDCD6-203ENST00000505526 CLMNQ96JQ2 1002 aa19.61■□□□□ 0.73
PDCD6-203ENST00000505526 PLA2G12BQ9BX93 195 aa19.61■□□□□ 0.73
PDCD6-203ENST00000505526 IGF2BP3O00425 579 aaKnown RBP eCLIP19.6■□□□□ 0.73
PDCD6-203ENST00000505526 PPP1R12BO60237 982 aaPredicted RBP19.6■□□□□ 0.73
PDCD6-203ENST00000505526 CHRNDQ07001 517 aa19.6■□□□□ 0.73
PDCD6-203ENST00000505526 CERS5Q8N5B7 392 aa19.6■□□□□ 0.73
PDCD6-203ENST00000505526 MTMR14Q8NCE2 650 aa19.6■□□□□ 0.73
PDCD6-203ENST00000505526 MEIS3Q99687 375 aa19.6■□□□□ 0.73
PDCD6-203ENST00000505526 PPP2R3BQ9Y5P8 575 aa19.6■□□□□ 0.73
PDCD6-203ENST00000505526 SSC5DA1L4H1 1573 aa19.6■□□□□ 0.73
PDCD6-203ENST00000505526 POTEFA5A3E0 1075 aa19.6■□□□□ 0.73
PDCD6-203ENST00000505526 ZBTB7BO15156 539 aaPredicted RBP19.6■□□□□ 0.73
PDCD6-203ENST00000505526 CSF1RP07333 972 aa19.6■□□□□ 0.73
PDCD6-203ENST00000505526 USP44Q9H0E7 712 aa19.6■□□□□ 0.73
PDCD6-203ENST00000505526 C9orf78Q9NZ63 289 aaPredicted RBP19.6■□□□□ 0.73
PDCD6-203ENST00000505526 PCDHAC2Q9Y5I4 1007 aa19.6■□□□□ 0.73
PDCD6-203ENST00000505526 GRM8O00222 908 aa19.59■□□□□ 0.73
PDCD6-203ENST00000505526 SUPT20HL1Q3ZLR7 823 aa19.59■□□□□ 0.73
PDCD6-203ENST00000505526 UNCXA6NJT0 531 aa19.58■□□□□ 0.72
PDCD6-203ENST00000505526 F8W031 263 aaPredicted RBP19.58■□□□□ 0.72
PDCD6-203ENST00000505526 SNAP23O00161 211 aa19.58■□□□□ 0.72
PDCD6-203ENST00000505526 MYO1BO43795 1136 aa19.58■□□□□ 0.72
PDCD6-203ENST00000505526 CASP7P55210 303 aa19.58■□□□□ 0.72
PDCD6-203ENST00000505526 ERO1AQ96HE7 468 aa19.58■□□□□ 0.72
PDCD6-203ENST00000505526 IRS2Q9Y4H2 1338 aa19.57■□□□□ 0.72
PDCD6-203ENST00000505526 CLRN2A0PK11 232 aa19.57■□□□□ 0.72
PDCD6-203ENST00000505526 NBPF7P0C2Y1 421 aaPredicted RBP19.57■□□□□ 0.72
PDCD6-203ENST00000505526 CFAP100Q494V2 611 aa19.57■□□□□ 0.72
PDCD6-203ENST00000505526 CHMP4BQ9H444 224 aaKnown RBP19.57■□□□□ 0.72
PDCD6-203ENST00000505526 PTPN22Q9Y2R2 807 aa19.57■□□□□ 0.72
PDCD6-203ENST00000505526 ANKRD18BA2A2Z9 1011 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms