RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 LSG1Q9H089 658 aaKnown RBP12.2□□□□□ -0.46
DDX41-203ENST00000504781 ANTXR1Q9H6X2 564 aa12.2□□□□□ -0.46
DDX41-203ENST00000504781 AKAP11Q9UKA4 1901 aa12.19□□□□□ -0.46
DDX41-203ENST00000504781 SNAP23O00161 211 aa12.19□□□□□ -0.46
DDX41-203ENST00000504781 MAP3K12Q12852 859 aa12.19□□□□□ -0.46
DDX41-203ENST00000504781 NECTIN1Q15223 517 aa12.19□□□□□ -0.46
DDX41-203ENST00000504781 RABEP1Q15276 862 aa12.19□□□□□ -0.46
DDX41-203ENST00000504781 GRIPAP1Q4V328 841 aa12.19□□□□□ -0.46
DDX41-203ENST00000504781 KCNB2Q92953 911 aa12.19□□□□□ -0.46
DDX41-203ENST00000504781 CNKSR1Q969H4 720 aa12.19□□□□□ -0.46
DDX41-203ENST00000504781 NSFL1CQ9UNZ2 370 aaKnown RBP12.19□□□□□ -0.46
DDX41-203ENST00000504781 KIAA1551Q9HCM1 1747 aa12.19□□□□□ -0.46
DDX41-203ENST00000504781 ARAP2Q8WZ64 1704 aa12.18□□□□□ -0.46
DDX41-203ENST00000504781 RASGRF1Q13972 1273 aa12.18□□□□□ -0.46
DDX41-203ENST00000504781 WASHC4Q2M389 1173 aa12.18□□□□□ -0.46
DDX41-203ENST00000504781 TSGA10IPQ3SY00 556 aa12.18□□□□□ -0.46
DDX41-203ENST00000504781 RNF20Q5VTR2 975 aa12.18□□□□□ -0.46
DDX41-203ENST00000504781 CC2D2BQ6DHV5 1058 aa12.18□□□□□ -0.46
DDX41-203ENST00000504781 C2CD5Q86YS7 1000 aa12.18□□□□□ -0.46
DDX41-203ENST00000504781 APPBP2Q92624 585 aa12.18□□□□□ -0.46
DDX41-203ENST00000504781 RNF181Q9P0P0 153 aa12.18□□□□□ -0.46
DDX41-203ENST00000504781 GGA1Q9UJY5 639 aa12.18□□□□□ -0.46
DDX41-203ENST00000504781 NDUFB9Q9Y6M9 179 aa12.18□□□□□ -0.46
DDX41-203ENST00000504781 IRS2Q9Y4H2 1338 aa12.17□□□□□ -0.46
DDX41-203ENST00000504781 A0A0D9SFI3 127 aa12.17□□□□□ -0.46
DDX41-203ENST00000504781 KIF3CO14782 793 aa12.17□□□□□ -0.46
DDX41-203ENST00000504781 PPEF1O14829 653 aaPredicted RBP12.17□□□□□ -0.46
DDX41-203ENST00000504781 ADD2P35612 726 aa12.17□□□□□ -0.46
DDX41-203ENST00000504781 GYG1P46976 350 aa12.17□□□□□ -0.46
DDX41-203ENST00000504781 GPSM2P81274 684 aa12.17□□□□□ -0.46
DDX41-203ENST00000504781 PTH1RQ03431 593 aa12.17□□□□□ -0.46
DDX41-203ENST00000504781 SLC9C2Q5TAH2 1124 aa12.17□□□□□ -0.46
DDX41-203ENST00000504781 TDRD7Q8NHU6 1098 aaKnown RBP12.17□□□□□ -0.46
DDX41-203ENST00000504781 DSCC1Q9BVC3 393 aa12.17□□□□□ -0.46
DDX41-203ENST00000504781 IL25Q9H293 177 aa12.17□□□□□ -0.46
DDX41-203ENST00000504781 TNRC6CQ9HCJ0 1690 aaKnown RBP12.16□□□□□ -0.46
DDX41-203ENST00000504781 CCDC171Q6TFL3 1326 aa12.16□□□□□ -0.46
DDX41-203ENST00000504781 WTIPA6NIX2 430 aaPredicted RBP12.16□□□□□ -0.46
DDX41-203ENST00000504781 FRAT2O75474 233 aaPredicted RBP12.16□□□□□ -0.46
DDX41-203ENST00000504781 ZKSCAN1P17029 563 aaPredicted RBP12.16□□□□□ -0.46
DDX41-203ENST00000504781 SPTY2D1Q68D10 685 aaPredicted RBP12.16□□□□□ -0.46
DDX41-203ENST00000504781 ZNF804AQ7Z570 1209 aa12.16□□□□□ -0.46
DDX41-203ENST00000504781 MPNDQ8N594 471 aa12.16□□□□□ -0.46
DDX41-203ENST00000504781 ZGPATQ8N5A5 531 aaKnown RBP12.16□□□□□ -0.46
DDX41-203ENST00000504781 WDR66Q8TBY9 1149 aa12.16□□□□□ -0.46
DDX41-203ENST00000504781 ZNF622Q969S3 477 aaKnown RBP eCLIP12.16□□□□□ -0.461e-8■■■□□ 14.9
DDX41-203ENST00000504781 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
DDX41-203ENST00000504781 NMRK2Q9NPI5 230 aa12.16□□□□□ -0.46
DDX41-203ENST00000504781 PIH1D3Q9NQM4 214 aaKnown RBP12.16□□□□□ -0.46
DDX41-203ENST00000504781 LRP2BPQ9P2M1 347 aa12.16□□□□□ -0.46
DDX41-203ENST00000504781 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
DDX41-203ENST00000504781 CTNNA3Q9UI47 895 aa12.16□□□□□ -0.46
DDX41-203ENST00000504781 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
DDX41-203ENST00000504781 MED23Q9ULK4 1368 aa12.16□□□□□ -0.46
DDX41-203ENST00000504781 ANKRD31Q8N7Z5 1873 aa12.15□□□□□ -0.46
DDX41-203ENST00000504781 IDH1O75874 414 aaKnown RBP12.15□□□□□ -0.46
DDX41-203ENST00000504781 IL1R1P14778 569 aa12.15□□□□□ -0.46
DDX41-203ENST00000504781 HSPA6P17066 643 aa12.15□□□□□ -0.46
DDX41-203ENST00000504781 MCM2P49736 904 aa12.15□□□□□ -0.46
DDX41-203ENST00000504781 PI16Q6UXB8 463 aa12.15□□□□□ -0.46
DDX41-203ENST00000504781 TTLL6Q8N841 843 aa12.15□□□□□ -0.46
DDX41-203ENST00000504781 TBC1D16Q8TBP0 767 aa12.15□□□□□ -0.46
DDX41-203ENST00000504781 OSBP2Q969R2 916 aa12.15□□□□□ -0.46
DDX41-203ENST00000504781 COL4A1P02462 1669 aa12.15□□□□□ -0.46
DDX41-203ENST00000504781 TCRBV5S4A2TA0A5A2 114 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 C6orf229H3BNL8 230 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 ST18O60284 1047 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 UFL1O94874 794 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 RASSF7Q02833 373 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 KRT32Q14532 448 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 ERICH6Q7L0X2 663 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 TXNRD3Q86VQ6 643 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 SEC62Q99442 399 aaKnown RBP12.14□□□□□ -0.47
DDX41-203ENST00000504781 EYA3Q99504 573 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 ZC3H12CQ9C0D7 883 aaKnown RBP12.14□□□□□ -0.47
DDX41-203ENST00000504781 COA1Q9GZY4 146 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 CD209Q9NNX6 404 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 POLLQ9UGP5 575 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 RBM8AQ9Y5S9 174 aaKnown RBP12.14□□□□□ -0.47
DDX41-203ENST00000504781 SNX14Q9Y5W7 946 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 A0A1B0GUL6 1792 aa12.14□□□□□ -0.47
DDX41-203ENST00000504781 SALL1Q9NSC2 1324 aa12.13□□□□□ -0.47
DDX41-203ENST00000504781 BRCA1P38398 1863 aaKnown RBP12.13□□□□□ -0.47
DDX41-203ENST00000504781 HSPD1P10809 573 aaKnown RBP12.13□□□□□ -0.47
DDX41-203ENST00000504781 PDE6AP16499 860 aa12.13□□□□□ -0.47
DDX41-203ENST00000504781 GNAT2P19087 354 aa12.13□□□□□ -0.47
DDX41-203ENST00000504781 PSMA5P28066 241 aa12.13□□□□□ -0.47
DDX41-203ENST00000504781 ALX1Q15699 326 aa12.13□□□□□ -0.47
DDX41-203ENST00000504781 CREB3L3Q68CJ9 461 aa12.13□□□□□ -0.47
DDX41-203ENST00000504781 ZNF589Q86UQ0 364 aaPredicted RBP12.13□□□□□ -0.47
DDX41-203ENST00000504781 HSCBQ8IWL3 235 aa12.13□□□□□ -0.47
DDX41-203ENST00000504781 C7orf43Q8WVR3 580 aa12.13□□□□□ -0.47
DDX41-203ENST00000504781 TBC1D2Q9BYX2 928 aa12.13□□□□□ -0.47
DDX41-203ENST00000504781 ZNF532Q9HCE3 1301 aa12.12□□□□□ -0.47
DDX41-203ENST00000504781 PATL2C9JE40 543 aaKnown RBP12.12□□□□□ -0.47
DDX41-203ENST00000504781 TOMM70O94826 608 aa12.12□□□□□ -0.47
DDX41-203ENST00000504781 NEK4P51957 841 aa12.12□□□□□ -0.47
DDX41-203ENST00000504781 PRPF40BQ6NWY9 871 aaKnown RBP12.12□□□□□ -0.47
DDX41-203ENST00000504781 DPP8Q6V1X1 898 aaPredicted RBP12.12□□□□□ -0.47
DDX41-203ENST00000504781 SUPT20HQ8NEM7 779 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms