RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 MKRN1Q9UHC7 482 aaKnown RBP26.35■■□□□ 1.81
TRAPPC11-203ENST00000504526 ABT1Q9ULW3 272 aaKnown RBP26.35■■□□□ 1.81
TRAPPC11-203ENST00000504526 PITPNM2Q9BZ72 1349 aa26.35■■□□□ 1.81
TRAPPC11-203ENST00000504526 TRPM7Q96QT4 1865 aa26.34■■□□□ 1.81
TRAPPC11-203ENST00000504526 RASSF10A6NK89 507 aa26.34■■□□□ 1.81
TRAPPC11-203ENST00000504526 CELF2O95319 508 aaKnown RBP26.34■■□□□ 1.81
TRAPPC11-203ENST00000504526 SLC5A1P13866 664 aa26.34■■□□□ 1.81
TRAPPC11-203ENST00000504526 ANGEL2Q5VTE6 544 aaKnown RBP26.33■■□□□ 1.81
TRAPPC11-203ENST00000504526 ITPRIPQ8IWB1 547 aa26.33■■□□□ 1.81
TRAPPC11-203ENST00000504526 CERS5Q8N5B7 392 aa26.33■■□□□ 1.81
TRAPPC11-203ENST00000504526 DEFB115Q30KQ5 88 aa26.32■■□□□ 1.8
TRAPPC11-203ENST00000504526 PA2G4Q9UQ80 394 aaKnown RBP26.32■■□□□ 1.8
TRAPPC11-203ENST00000504526 FRAT2O75474 233 aaPredicted RBP26.31■■□□□ 1.8
TRAPPC11-203ENST00000504526 IFFO2Q5TF58 517 aa26.31■■□□□ 1.8
TRAPPC11-203ENST00000504526 TLL2Q9Y6L7 1015 aa26.31■■□□□ 1.8
TRAPPC11-203ENST00000504526 ASTN2O75129 1339 aaPredicted RBP26.31■■□□□ 1.8
TRAPPC11-203ENST00000504526 WNT10BO00744 389 aa26.3■■□□□ 1.8
TRAPPC11-203ENST00000504526 RLBP1P12271 317 aa26.3■■□□□ 1.8
TRAPPC11-203ENST00000504526 ZNF408Q9H9D4 720 aa26.3■■□□□ 1.8
TRAPPC11-203ENST00000504526 RCAN3Q9UKA8 241 aa26.3■■□□□ 1.8
TRAPPC11-203ENST00000504526 ADM5C9JUS6 153 aa26.29■■□□□ 1.8
TRAPPC11-203ENST00000504526 ATP2B3Q16720 1220 aa26.29■■□□□ 1.8
TRAPPC11-203ENST00000504526 NBPF9Q3BBW0 867 aa26.29■■□□□ 1.8
TRAPPC11-203ENST00000504526 MFSD14BQ5SR56 506 aa26.29■■□□□ 1.8
TRAPPC11-203ENST00000504526 MTMR14Q8NCE2 650 aa26.29■■□□□ 1.8
TRAPPC11-203ENST00000504526 TBC1D22AQ8WUA7 517 aa26.29■■□□□ 1.8
TRAPPC11-203ENST00000504526 ZBTB7BO15156 539 aaPredicted RBP26.28■■□□□ 1.8
TRAPPC11-203ENST00000504526 BCAMP50895 628 aa26.28■■□□□ 1.8
TRAPPC11-203ENST00000504526 DLGAP5Q15398 846 aa26.28■■□□□ 1.8
TRAPPC11-203ENST00000504526 ZBED3Q96IU2 234 aaPredicted RBP26.28■■□□□ 1.8
TRAPPC11-203ENST00000504526 JAG2Q9Y219 1238 aa26.28■■□□□ 1.8
TRAPPC11-203ENST00000504526 VEGFBP49765 207 aa26.27■■□□□ 1.8
TRAPPC11-203ENST00000504526 HHIPL1Q96JK4 782 aa26.27■■□□□ 1.8
TRAPPC11-203ENST00000504526 F8W031 263 aaPredicted RBP26.26■■□□□ 1.79
TRAPPC11-203ENST00000504526 ECE1P42892 770 aa26.26■■□□□ 1.79
TRAPPC11-203ENST00000504526 SAPCD2Q86UD0 394 aa26.26■■□□□ 1.79
TRAPPC11-203ENST00000504526 PNMA6EA0A0J9YXQ4 647 aa26.25■■□□□ 1.79
TRAPPC11-203ENST00000504526 CDCA5Q96FF9 252 aa26.25■■□□□ 1.79
TRAPPC11-203ENST00000504526 GNL3LQ9NVN8 582 aaKnown RBP26.25■■□□□ 1.79
TRAPPC11-203ENST00000504526 IQSEC3Q9UPP2 1182 aaPredicted RBP26.25■■□□□ 1.79
TRAPPC11-203ENST00000504526 AKAP2Q9Y2D5 859 aa26.25■■□□□ 1.79
TRAPPC11-203ENST00000504526 POLR2AP24928 1970 aaKnown RBP26.24■■□□□ 1.79
TRAPPC11-203ENST00000504526 ATP8B2P98198 1209 aa26.24■■□□□ 1.79
TRAPPC11-203ENST00000504526 CHAF1AQ13111 956 aaPredicted RBP26.24■■□□□ 1.79
TRAPPC11-203ENST00000504526 APOBEC3FQ8IUX4 373 aaKnown RBP26.24■■□□□ 1.79
TRAPPC11-203ENST00000504526 C2orf69Q8N8R5 385 aa26.24■■□□□ 1.79
TRAPPC11-203ENST00000504526 PANK1Q8TE04 598 aa26.24■■□□□ 1.79
TRAPPC11-203ENST00000504526 GBA2Q9HCG7 927 aaPredicted RBP26.24■■□□□ 1.79
TRAPPC11-203ENST00000504526 MYO1BO43795 1136 aa26.23■■□□□ 1.79
TRAPPC11-203ENST00000504526 G3BP1Q13283 466 aaKnown RBP eCLIP26.23■■□□□ 1.79
TRAPPC11-203ENST00000504526 POLA2Q14181 598 aa26.23■■□□□ 1.79
TRAPPC11-203ENST00000504526 CFAP100Q494V2 611 aa26.23■■□□□ 1.79
TRAPPC11-203ENST00000504526 DLK2Q6UY11 383 aa26.23■■□□□ 1.79
TRAPPC11-203ENST00000504526 SERPINA10Q9UK55 444 aa26.23■■□□□ 1.79
TRAPPC11-203ENST00000504526 TTF2Q9UNY4 1162 aaKnown RBP26.23■■□□□ 1.79
TRAPPC11-203ENST00000504526 WDR33Q9C0J8 1336 aaKnown RBP26.22■■□□□ 1.79
TRAPPC11-203ENST00000504526 SPDYE2BA6NHP3 402 aa26.22■■□□□ 1.79
TRAPPC11-203ENST00000504526 SPDYE6P0CI01 402 aa26.22■■□□□ 1.79
TRAPPC11-203ENST00000504526 PAXIP1Q6ZW49 1069 aaPredicted RBP26.22■■□□□ 1.79
TRAPPC11-203ENST00000504526 SSH3Q8TE77 659 aa26.22■■□□□ 1.79
TRAPPC11-203ENST00000504526 CAPNS2Q96L46 248 aa26.22■■□□□ 1.79
TRAPPC11-203ENST00000504526 SUGT1Q9Y2Z0 365 aa26.22■■□□□ 1.79
TRAPPC11-203ENST00000504526 ARAP2Q8WZ64 1704 aa26.22■■□□□ 1.79
TRAPPC11-203ENST00000504526 ZBTB22O15209 634 aa26.21■■□□□ 1.79
TRAPPC11-203ENST00000504526 RBM5P52756 815 aaKnown RBP eCLIP26.21■■□□□ 1.79
TRAPPC11-203ENST00000504526 TFCP2Q12800 502 aa26.21■■□□□ 1.79
TRAPPC11-203ENST00000504526 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.21■■□□□ 1.79
TRAPPC11-203ENST00000504526 WDR66Q8TBY9 1149 aa26.21■■□□□ 1.79
TRAPPC11-203ENST00000504526 SEMA3EO15041 775 aa26.2■■□□□ 1.78
TRAPPC11-203ENST00000504526 FKBP1BP68106 108 aa26.2■■□□□ 1.78
TRAPPC11-203ENST00000504526 HDLBPQ00341 1268 aaKnown RBP26.2■■□□□ 1.78
TRAPPC11-203ENST00000504526 C1orf115Q9H7X2 142 aa26.2■■□□□ 1.78
TRAPPC11-203ENST00000504526 MAST3O60307 1309 aa26.19■■□□□ 1.78
TRAPPC11-203ENST00000504526 COL1A1P02452 1464 aaPredicted RBP26.19■■□□□ 1.78
TRAPPC11-203ENST00000504526 A0A1B0GUL7 405 aa26.19■■□□□ 1.78
TRAPPC11-203ENST00000504526 HUNKP57058 714 aa26.19■■□□□ 1.78
TRAPPC11-203ENST00000504526 MVPQ14764 893 aaKnown RBP26.19■■□□□ 1.78
TRAPPC11-203ENST00000504526 CYP4F22Q6NT55 531 aa26.19■■□□□ 1.78
TRAPPC11-203ENST00000504526 CHMP4BQ9H444 224 aaKnown RBP26.19■■□□□ 1.78
TRAPPC11-203ENST00000504526 DDX19BQ9UMR2 479 aa26.19■■□□□ 1.78
TRAPPC11-203ENST00000504526 NF2P35240 595 aa26.18■■□□□ 1.78
TRAPPC11-203ENST00000504526 PRMT6Q96LA8 375 aaPredicted RBP26.18■■□□□ 1.78
TRAPPC11-203ENST00000504526 MRIQ9BWK5 157 aa26.18■■□□□ 1.78
TRAPPC11-203ENST00000504526 HSPA1AP0DMV8 641 aaKnown RBP26.17■■□□□ 1.78
TRAPPC11-203ENST00000504526 HSPA1BP0DMV9 641 aaKnown RBP26.17■■□□□ 1.78
TRAPPC11-203ENST00000504526 TIMM10P62072 90 aa26.17■■□□□ 1.78
TRAPPC11-203ENST00000504526 CCDC102BQ68D86 513 aa26.17■■□□□ 1.78
TRAPPC11-203ENST00000504526 DENND2AQ9ULE3 1009 aa26.17■■□□□ 1.78
TRAPPC11-203ENST00000504526 PPP2R3BQ9Y5P8 575 aa26.17■■□□□ 1.78
TRAPPC11-203ENST00000504526 PHKA1P46020 1223 aa26.16■■□□□ 1.78
TRAPPC11-203ENST00000504526 CRKP46108 304 aa26.16■■□□□ 1.78
TRAPPC11-203ENST00000504526 SCAF8Q9UPN6 1271 aaKnown RBP26.16■■□□□ 1.78
TRAPPC11-203ENST00000504526 ADORA1P30542 326 aa26.15■■□□□ 1.78
TRAPPC11-203ENST00000504526 MAP2K2P36507 400 aa26.15■■□□□ 1.78
TRAPPC11-203ENST00000504526 PDE3AQ14432 1141 aa26.15■■□□□ 1.78
TRAPPC11-203ENST00000504526 CEP85Q6P2H3 762 aa26.15■■□□□ 1.78
TRAPPC11-203ENST00000504526 TEKT1Q969V4 418 aa26.15■■□□□ 1.78
TRAPPC11-203ENST00000504526 XAGE2Q96GT9 111 aa26.15■■□□□ 1.78
TRAPPC11-203ENST00000504526 NOP58Q9Y2X3 529 aaKnown RBP26.15■■□□□ 1.78
TRAPPC11-203ENST00000504526 PCDHAC2Q9Y5I4 1007 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms