RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TIMELESSQ9UNS1 1208 aa16.46■□□□□ 0.23
LSM6-204ENST00000504181 CCL15-CCL14A0A0B4J2E2 113 aa16.45■□□□□ 0.22
LSM6-204ENST00000504181 GJB1P08034 283 aa16.45■□□□□ 0.22
LSM6-204ENST00000504181 CCL5P13501 91 aa16.45■□□□□ 0.22
LSM6-204ENST00000504181 CCL15Q16663 113 aa16.45■□□□□ 0.22
LSM6-204ENST00000504181 FAM43AQ8N2R8 423 aa16.45■□□□□ 0.22
LSM6-204ENST00000504181 CCDC85AQ96PX6 553 aaPredicted RBP16.45■□□□□ 0.22
LSM6-204ENST00000504181 PPP2R3BQ9Y5P8 575 aa16.45■□□□□ 0.22
LSM6-204ENST00000504181 SUPT20HL1Q3ZLR7 823 aa16.44■□□□□ 0.22
LSM6-204ENST00000504181 RNF208Q9H0X6 261 aa16.44■□□□□ 0.22
LSM6-204ENST00000504181 MMP14P50281 582 aa16.43■□□□□ 0.22
LSM6-204ENST00000504181 PRMT2P55345 433 aa16.43■□□□□ 0.22
LSM6-204ENST00000504181 DLGAP5Q15398 846 aa16.43■□□□□ 0.22
LSM6-204ENST00000504181 PLBD2Q8NHP8 589 aa16.43■□□□□ 0.22
LSM6-204ENST00000504181 RNF39Q9H2S5 420 aa16.43■□□□□ 0.22
LSM6-204ENST00000504181 PCDHAC2Q9Y5I4 1007 aa16.43■□□□□ 0.22
LSM6-204ENST00000504181 A0A1B0GUL6 1792 aa16.43■□□□□ 0.22
LSM6-204ENST00000504181 ZNF804BA4D1E1 1349 aa16.43■□□□□ 0.22
LSM6-204ENST00000504181 LAMA2P24043 3122 aaKnown RBP16.42■□□□□ 0.22
LSM6-204ENST00000504181 CLRN2A0PK11 232 aa16.42■□□□□ 0.22
LSM6-204ENST00000504181 TLR2O60603 784 aa16.42■□□□□ 0.22
LSM6-204ENST00000504181 GNRH1P01148 92 aa16.42■□□□□ 0.22
LSM6-204ENST00000504181 NEFMP07197 916 aa16.42■□□□□ 0.22
LSM6-204ENST00000504181 GRK4P32298 578 aa16.42■□□□□ 0.22
LSM6-204ENST00000504181 TTLL5Q6EMB2 1281 aa16.42■□□□□ 0.22
LSM6-204ENST00000504181 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
LSM6-204ENST00000504181 VEZTQ9HBM0 779 aa16.42■□□□□ 0.22
LSM6-204ENST00000504181 PRUNE2Q8WUY3 3088 aa16.42■□□□□ 0.22
LSM6-204ENST00000504181 CTGFP29279 349 aa16.41■□□□□ 0.22
LSM6-204ENST00000504181 BCAMP50895 628 aa16.41■□□□□ 0.22
LSM6-204ENST00000504181 GTF2A2P52657 109 aa16.41■□□□□ 0.22
LSM6-204ENST00000504181 CCDC152Q4G0S7 254 aa16.41■□□□□ 0.22
LSM6-204ENST00000504181 RAET1EQ8TD07 263 aa16.41■□□□□ 0.22
LSM6-204ENST00000504181 U2AF1L4Q8WU68 220 aaKnown RBP16.41■□□□□ 0.22
LSM6-204ENST00000504181 GDF15Q99988 308 aa16.41■□□□□ 0.22
LSM6-204ENST00000504181 BIN2Q9UBW5 565 aaPredicted RBP16.41■□□□□ 0.22
LSM6-204ENST00000504181 RIPOR2Q9Y4F9 1068 aa16.41■□□□□ 0.22
LSM6-204ENST00000504181 WDHD1O75717 1129 aaPredicted RBP16.4■□□□□ 0.22
LSM6-204ENST00000504181 BMP8BP34820 402 aa16.4■□□□□ 0.22
LSM6-204ENST00000504181 TXNRD3Q86VQ6 643 aa16.4■□□□□ 0.22
LSM6-204ENST00000504181 COA1Q9GZY4 146 aa16.4■□□□□ 0.22
LSM6-204ENST00000504181 CHPF2Q9P2E5 772 aa16.4■□□□□ 0.22
LSM6-204ENST00000504181 SRRDQ9UH36 339 aa16.4■□□□□ 0.22
LSM6-204ENST00000504181 GTF2IP78347 998 aa16.39■□□□□ 0.21
LSM6-204ENST00000504181 NFE2L2Q16236 605 aa16.39■□□□□ 0.21
LSM6-204ENST00000504181 DDX60LQ5H9U9 1706 aaKnown RBP16.39■□□□□ 0.21
LSM6-204ENST00000504181 DOCK3Q8IZD9 2030 aa16.38■□□□□ 0.21
LSM6-204ENST00000504181 COL9A1P20849 921 aa16.38■□□□□ 0.21
LSM6-204ENST00000504181 OSBPP22059 807 aa16.38■□□□□ 0.21
LSM6-204ENST00000504181 PSMC4P43686 418 aa16.38■□□□□ 0.21
LSM6-204ENST00000504181 CCT4P50991 539 aaKnown RBP16.38■□□□□ 0.21
LSM6-204ENST00000504181 UBXN2AP68543 259 aa16.38■□□□□ 0.21
LSM6-204ENST00000504181 LRIT3Q3SXY7 679 aa16.38■□□□□ 0.21
LSM6-204ENST00000504181 ZBTB38Q8NAP3 1195 aaPredicted RBP16.38■□□□□ 0.21
LSM6-204ENST00000504181 TRIM47Q96LD4 638 aa16.38■□□□□ 0.21
LSM6-204ENST00000504181 AOX1Q06278 1338 aa16.38■□□□□ 0.21
LSM6-204ENST00000504181 MYPNQ86TC9 1320 aa16.38■□□□□ 0.21
LSM6-204ENST00000504181 RPTORQ8N122 1335 aa16.38■□□□□ 0.21
LSM6-204ENST00000504181 MYO1BO43795 1136 aa16.37■□□□□ 0.21
LSM6-204ENST00000504181 RASA3Q14644 834 aa16.37■□□□□ 0.21
LSM6-204ENST00000504181 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.37■□□□□ 0.21
LSM6-204ENST00000504181 JARID2Q92833 1246 aaPredicted RBP16.37■□□□□ 0.21
LSM6-204ENST00000504181 UNC93B1Q9H1C4 597 aa16.37■□□□□ 0.21
LSM6-204ENST00000504181 ZMYND8Q9ULU4 1186 aaPredicted RBP16.37■□□□□ 0.21
LSM6-204ENST00000504181 PDE8AO60658 829 aa16.36■□□□□ 0.21
LSM6-204ENST00000504181 SGPL1O95470 568 aa16.36■□□□□ 0.21
LSM6-204ENST00000504181 VGLL4Q14135 290 aa16.36■□□□□ 0.21
LSM6-204ENST00000504181 CFAP100Q494V2 611 aa16.36■□□□□ 0.21
LSM6-204ENST00000504181 C7orf61Q8IZ16 206 aa16.36■□□□□ 0.21
LSM6-204ENST00000504181 MTMR14Q8NCE2 650 aa16.36■□□□□ 0.21
LSM6-204ENST00000504181 MINPP1Q9UNW1 487 aa16.36■□□□□ 0.21
LSM6-204ENST00000504181 BTBD19C9JJ37 291 aa16.35■□□□□ 0.21
LSM6-204ENST00000504181 F8W031 263 aaPredicted RBP16.35■□□□□ 0.21
LSM6-204ENST00000504181 FMNL1O95466 1100 aaPredicted RBP16.35■□□□□ 0.21
LSM6-204ENST00000504181 HSP90B1P14625 803 aaKnown RBP16.35■□□□□ 0.21
LSM6-204ENST00000504181 KLRK1P26718 216 aa16.35■□□□□ 0.21
LSM6-204ENST00000504181 HOXD10P28358 340 aa16.35■□□□□ 0.21
LSM6-204ENST00000504181 TRIM28Q13263 835 aaKnown RBP16.35■□□□□ 0.21
LSM6-204ENST00000504181 KRT24Q2M2I5 525 aa16.35■□□□□ 0.21
LSM6-204ENST00000504181 TDHQ8IZJ6 230 aa16.35■□□□□ 0.21
LSM6-204ENST00000504181 PRMT6Q96LA8 375 aaPredicted RBP16.35■□□□□ 0.21
LSM6-204ENST00000504181 CPA4Q9UI42 421 aa16.35■□□□□ 0.21
LSM6-204ENST00000504181 SPDYE2BA6NHP3 402 aa16.34■□□□□ 0.21
LSM6-204ENST00000504181 TFRCP02786 760 aaKnown RBP16.34■□□□□ 0.21
LSM6-204ENST00000504181 SPDYE6P0CI01 402 aa16.34■□□□□ 0.21
LSM6-204ENST00000504181 PPP2R1AP30153 589 aa16.34■□□□□ 0.21
LSM6-204ENST00000504181 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
LSM6-204ENST00000504181 C17orf99Q6UX52 265 aa16.34■□□□□ 0.21
LSM6-204ENST00000504181 CERS5Q8N5B7 392 aa16.34■□□□□ 0.21
LSM6-204ENST00000504181 PLEKHF1Q96S99 279 aa16.34■□□□□ 0.21
LSM6-204ENST00000504181 RAPGEFL1Q9UHV5 662 aa16.34■□□□□ 0.21
LSM6-204ENST00000504181 AK9Q5TCS8 1911 aa16.34■□□□□ 0.21
LSM6-204ENST00000504181 TTC28Q96AY4 2481 aa16.33■□□□□ 0.2
LSM6-204ENST00000504181 CETPP11597 493 aa16.33■□□□□ 0.2
LSM6-204ENST00000504181 SYN1P17600 705 aa16.33■□□□□ 0.2
LSM6-204ENST00000504181 CDAN1Q8IWY9 1227 aa16.33■□□□□ 0.2
LSM6-204ENST00000504181 PAWRQ96IZ0 340 aaKnown RBP16.33■□□□□ 0.2
LSM6-204ENST00000504181 GUCD1Q96NT3 240 aa16.33■□□□□ 0.2
LSM6-204ENST00000504181 CDC5LQ99459 802 aaKnown RBP16.33■□□□□ 0.2
LSM6-204ENST00000504181 CSADQ9Y600 493 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms