RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 TIMM10P62072 90 aa17.46■□□□□ 0.38
SNF8-203ENST00000504000 FBXO18Q8NFZ0 1043 aa17.46■□□□□ 0.38
SNF8-203ENST00000504000 A0A1B0GUL7 405 aa17.45■□□□□ 0.38
SNF8-203ENST00000504000 NBPF26B4DH59 902 aa17.45■□□□□ 0.38
SNF8-203ENST00000504000 KIF20AO95235 890 aa17.45■□□□□ 0.38
SNF8-203ENST00000504000 NBPF14Q5TI25 921 aa17.45■□□□□ 0.38
SNF8-203ENST00000504000 NBPF10Q6P3W6 841 aaKnown RBP17.45■□□□□ 0.38
SNF8-203ENST00000504000 CCAR2Q8N163 923 aaKnown RBP17.45■□□□□ 0.38
SNF8-203ENST00000504000 NBPF15Q8N660 670 aa17.45■□□□□ 0.38
SNF8-203ENST00000504000 SDF4Q9BRK5 362 aa17.45■□□□□ 0.38
SNF8-203ENST00000504000 NCOA5Q9HCD5 579 aaKnown RBP17.45■□□□□ 0.38
SNF8-203ENST00000504000 U2AF2P26368 475 aaKnown RBP eCLIP17.44■□□□□ 0.38
SNF8-203ENST00000504000 IMMTQ16891 758 aaKnown RBP17.44■□□□□ 0.38
SNF8-203ENST00000504000 CCDC150Q8NCX0 1101 aa17.44■□□□□ 0.38
SNF8-203ENST00000504000 AKAP2Q9Y2D5 859 aa17.44■□□□□ 0.38
SNF8-203ENST00000504000 DDX60Q8IY21 1712 aaKnown RBP17.44■□□□□ 0.38
SNF8-203ENST00000504000 AOPEPQ8N6M6 819 aa17.44■□□□□ 0.38
SNF8-203ENST00000504000 TIGD1Q96MW7 591 aa17.44■□□□□ 0.38
SNF8-203ENST00000504000 UBR2Q8IWV8 1755 aa17.43■□□□□ 0.38
SNF8-203ENST00000504000 SLFNL1Q499Z3 407 aa17.43■□□□□ 0.38
SNF8-203ENST00000504000 CCDC158Q5M9N0 1113 aa17.43■□□□□ 0.38
SNF8-203ENST00000504000 NBPF11Q86T75 865 aa17.43■□□□□ 0.38
SNF8-203ENST00000504000 MB21D2Q8IYB1 491 aaPredicted RBP17.43■□□□□ 0.38
SNF8-203ENST00000504000 KIF18AQ8NI77 898 aa17.43■□□□□ 0.38
SNF8-203ENST00000504000 OSBP2Q969R2 916 aa17.43■□□□□ 0.38
SNF8-203ENST00000504000 ERO1AQ96HE7 468 aa17.43■□□□□ 0.38
SNF8-203ENST00000504000 C8orf76Q96K31 380 aa17.43■□□□□ 0.38
SNF8-203ENST00000504000 CPDO75976 1380 aa17.43■□□□□ 0.38
SNF8-203ENST00000504000 NEDD4P46934 1319 aa17.43■□□□□ 0.38
SNF8-203ENST00000504000 PSDA5PKW4 1024 aaPredicted RBP17.42■□□□□ 0.38
SNF8-203ENST00000504000 M0R2C6 588 aa17.42■□□□□ 0.38
SNF8-203ENST00000504000 SPTLC2O15270 562 aa17.42■□□□□ 0.38
SNF8-203ENST00000504000 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
SNF8-203ENST00000504000 TPM4P67936 248 aa17.42■□□□□ 0.38
SNF8-203ENST00000504000 STK38Q15208 465 aa17.42■□□□□ 0.38
SNF8-203ENST00000504000 ZRSR1Q15695 479 aaKnown RBP17.42■□□□□ 0.38
SNF8-203ENST00000504000 MYSM1Q5VVJ2 828 aa17.42■□□□□ 0.38
SNF8-203ENST00000504000 CEP126Q9P2H0 1117 aa17.42■□□□□ 0.38
SNF8-203ENST00000504000 DDX41Q9UJV9 622 aaKnown RBP17.42■□□□□ 0.38
SNF8-203ENST00000504000 DCCP43146 1447 aa17.42■□□□□ 0.38
SNF8-203ENST00000504000 ERVV-2B6SEH9 535 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 IKBKBO14920 756 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 CMA1P23946 247 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 NDUFA8P51970 172 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 NLRP12P59046 1061 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 SF3A1Q15459 793 aaKnown RBP17.41■□□□□ 0.38
SNF8-203ENST00000504000 FILIP1Q7Z7B0 1213 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
SNF8-203ENST00000504000 MORC2Q9Y6X9 1032 aaPredicted RBP17.41■□□□□ 0.38
SNF8-203ENST00000504000 FOXP2O15409 715 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 CSB-PGBD3P0DP91 1061 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 ARID5BQ14865 1188 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 LRRC24Q50LG9 513 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 NCOA7Q8NI08 942 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 HPS5Q9UPZ3 1129 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 NWD2Q9ULI1 1742 aa17.41■□□□□ 0.38
SNF8-203ENST00000504000 A0A0G2JLW4 131 aa17.4■□□□□ 0.38
SNF8-203ENST00000504000 A0A1B0GVL5 298 aa17.4■□□□□ 0.38
SNF8-203ENST00000504000 USP27XA6NNY8 438 aa17.4■□□□□ 0.38
SNF8-203ENST00000504000 MYO1BO43795 1136 aa17.4■□□□□ 0.38
SNF8-203ENST00000504000 NRDCO43847 1150 aa17.4■□□□□ 0.38
SNF8-203ENST00000504000 GUCY1B3Q02153 619 aa17.4■□□□□ 0.38
SNF8-203ENST00000504000 TRIM28Q13263 835 aaKnown RBP17.4■□□□□ 0.38
SNF8-203ENST00000504000 ZNF397Q8NF99 534 aaPredicted RBP17.4■□□□□ 0.38
SNF8-203ENST00000504000 APPBP2Q92624 585 aa17.4■□□□□ 0.38
SNF8-203ENST00000504000 PRDM10Q9NQV6 1147 aa17.4■□□□□ 0.38
SNF8-203ENST00000504000 FAM237AA0A1B0GTK4 181 aa17.39■□□□□ 0.38
SNF8-203ENST00000504000 PRC1O43663 620 aa17.39■□□□□ 0.38
SNF8-203ENST00000504000 FGAP02671 866 aa17.39■□□□□ 0.38
SNF8-203ENST00000504000 SLC3A2P08195 630 aaKnown RBP17.39■□□□□ 0.38
SNF8-203ENST00000504000 GABPB1Q06547 395 aaPredicted RBP17.39■□□□□ 0.38
SNF8-203ENST00000504000 TTLL5Q6EMB2 1281 aa17.39■□□□□ 0.38
SNF8-203ENST00000504000 SYNE3Q6ZMZ3 975 aa17.39■□□□□ 0.38
SNF8-203ENST00000504000 TTLL7Q6ZT98 887 aa17.39■□□□□ 0.38
SNF8-203ENST00000504000 ISCA1Q9BUE6 129 aa17.39■□□□□ 0.38
SNF8-203ENST00000504000 PLA2G12BQ9BX93 195 aa17.39■□□□□ 0.38
SNF8-203ENST00000504000 L2HGDHQ9H9P8 463 aa17.39■□□□□ 0.38
SNF8-203ENST00000504000 ORC3Q9UBD5 711 aaPredicted RBP17.39■□□□□ 0.38
SNF8-203ENST00000504000 CLIC4Q9Y696 253 aa17.39■□□□□ 0.38
SNF8-203ENST00000504000 PAPPAQ13219 1627 aa17.39■□□□□ 0.37
SNF8-203ENST00000504000 ZNF202O95125 648 aa17.39■□□□□ 0.37
SNF8-203ENST00000504000 AXDND1Q5T1B0 1012 aaPredicted RBP17.39■□□□□ 0.37
SNF8-203ENST00000504000 ANO1Q5XXA6 986 aa17.39■□□□□ 0.37
SNF8-203ENST00000504000 NAP1L2Q9ULW6 460 aaPredicted RBP17.39■□□□□ 0.37
SNF8-203ENST00000504000 KCPQ6ZWJ8 1503 aa17.39■□□□□ 0.37
SNF8-203ENST00000504000 KLF18A0A0U1RQI7 1052 aa17.38■□□□□ 0.37
SNF8-203ENST00000504000 SPDYE4A6NLX3 237 aa17.38■□□□□ 0.37
SNF8-203ENST00000504000 PPP6R2O75170 966 aa17.38■□□□□ 0.37
SNF8-203ENST00000504000 SLU7O95391 586 aaKnown RBP17.38■□□□□ 0.37
SNF8-203ENST00000504000 FOSBP53539 338 aa17.38■□□□□ 0.37
SNF8-203ENST00000504000 KIF23Q02241 960 aaPredicted RBP17.38■□□□□ 0.37
SNF8-203ENST00000504000 SLC39A14Q15043 492 aa17.38■□□□□ 0.37
SNF8-203ENST00000504000 NKX1-1Q15270 411 aaPredicted RBP17.38■□□□□ 0.37
SNF8-203ENST00000504000 DPCR1Q3MIW9 517 aa17.38■□□□□ 0.37
SNF8-203ENST00000504000 TTC39AQ5SRH9 613 aa17.38■□□□□ 0.37
SNF8-203ENST00000504000 CHST3Q7LGC8 479 aa17.38■□□□□ 0.37
SNF8-203ENST00000504000 ZNF512BQ96KM6 892 aaPredicted RBP17.38■□□□□ 0.37
SNF8-203ENST00000504000 PCDH11XQ9BZA7 1347 aa17.38■□□□□ 0.37
SNF8-203ENST00000504000 PCDH11YQ9BZA8 1340 aa17.38■□□□□ 0.37
SNF8-203ENST00000504000 TNS3Q68CZ2 1445 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms