RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 GRM8O00222 908 aa11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 CENPQQ7L2Z9 268 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 RPAINQ86UA6 219 aa11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 USP44Q9H0E7 712 aa11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 SH3TC1Q8TE82 1336 aa11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 IPO7O95373 1038 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 CHAF1AQ13111 956 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 HDAC1Q13547 482 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 PPP2R5AQ15172 486 aa11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 SLC10A5Q5PT55 438 aa11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 TPTE2Q6XPS3 522 aa11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 KRT222Q8N1A0 295 aa11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 CNBD1Q8NA66 436 aa11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 TBC1D22AQ8WUA7 517 aa11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 SPON1Q9HCB6 807 aa11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.35□□□□□ -0.592e-6■■■■■ 86.5
PDLIM5-207ENST00000503974 ZNF446Q9NWS9 450 aa11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 FAM53CQ9NYF3 392 aa11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 ATF5Q9Y2D1 282 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 DLEC1Q9Y238 1755 aa11.35□□□□□ -0.59
PDLIM5-207ENST00000503974 NRDCO43847 1150 aa11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 POLD1P28340 1107 aa11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 RBM5P52756 815 aaKnown RBP eCLIP11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 CCT2P78371 535 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 NOLC1Q14978 699 aaKnown RBP eCLIP11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 SART3Q15020 963 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 SYCP1Q15431 976 aa11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 PLA2G12BQ9BX93 195 aa11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 TRMT112Q9UI30 125 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 COL11A2P13942 1736 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 MYO1CO00159 1063 aa11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 ZBTB7BO15156 539 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 DDX19BQ9UMR2 479 aa11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 COG6Q9Y2V7 657 aa11.34□□□□□ -0.59
PDLIM5-207ENST00000503974 KLRG2A4D1S0 409 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-207ENST00000503974 H0YHG0 523 aa11.33□□□□□ -0.6
PDLIM5-207ENST00000503974 NBPF7P0C2Y1 421 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-207ENST00000503974 SARNPP82979 210 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-207ENST00000503974 ERFEQ4G0M1 354 aa11.33□□□□□ -0.6
PDLIM5-207ENST00000503974 UBE3BQ7Z3V4 1068 aa11.33□□□□□ -0.6
PDLIM5-207ENST00000503974 NUTM1Q86Y26 1132 aa11.33□□□□□ -0.6
PDLIM5-207ENST00000503974 ITPRIPQ8IWB1 547 aa11.33□□□□□ -0.6
PDLIM5-207ENST00000503974 FAM89AQ96GI7 184 aa11.33□□□□□ -0.6
PDLIM5-207ENST00000503974 MEIS3Q99687 375 aa11.33□□□□□ -0.6
PDLIM5-207ENST00000503974 DEF6Q9H4E7 631 aa11.33□□□□□ -0.6
PDLIM5-207ENST00000503974 ST5P78524 1137 aa11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 SYNE4Q8N205 404 aa11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 PIK3R5Q8WYR1 880 aa11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 C9orf78Q9NZ63 289 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 CCDC196A0A1B0GTZ2 297 aa11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 A0A1B0GUL7 405 aa11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 IRS4O14654 1257 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 GNAI3P08754 354 aa11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 C10orf67Q8IYJ2 551 aa11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 GOLGA6L1Q8N7Z2 621 aa11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 FAM184AQ8NB25 1140 aa11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 KIF18AQ8NI77 898 aa11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 KAZALD1Q96I82 304 aa11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 NUCKS1Q9H1E3 243 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 DDX49Q9Y6V7 483 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-207ENST00000503974 TRIM66O15016 1216 aa11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 TPM3P06753 285 aa11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 ZNF445P59923 1031 aa11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 CRY2Q49AN0 593 aa11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 SUGP1Q8IWZ8 645 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 SUCLG2Q96I99 432 aa11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 BRIP1Q9BX63 1249 aa11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 BRCA1P38398 1863 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 PDE8AO60658 829 aa11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 UBTFL1P0CB47 393 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 RABL6Q3YEC7 729 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 PIBF1Q8WXW3 757 aa11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 CRBNQ96SW2 442 aa11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 ZBTB40Q9NUA8 1239 aa11.31□□□□□ -0.6
PDLIM5-207ENST00000503974 RTL9Q8NET4 1388 aa11.3□□□□□ -0.6
PDLIM5-207ENST00000503974 SCP2P22307 547 aa11.3□□□□□ -0.6
PDLIM5-207ENST00000503974 PAX7P23759 505 aa11.3□□□□□ -0.6
PDLIM5-207ENST00000503974 FOXO4P98177 505 aa11.3□□□□□ -0.6
PDLIM5-207ENST00000503974 SF3B3Q15393 1217 aaKnown RBP11.3□□□□□ -0.6
PDLIM5-207ENST00000503974 ZSCAN26Q16670 478 aa11.3□□□□□ -0.6
PDLIM5-207ENST00000503974 SYT10Q6XYQ8 523 aa11.3□□□□□ -0.6
PDLIM5-207ENST00000503974 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-207ENST00000503974 KDM4AO75164 1064 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 CSF1RP07333 972 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 HCLS1P14317 486 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 EPHA10Q5JZY3 1008 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 C3orf67Q6ZVT6 689 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 EXOC8Q8IYI6 725 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 CCDC24Q8N4L8 307 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 DIAPH3Q9NSV4 1193 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 PDZRN3Q9UPQ7 1066 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 SMC3Q9UQE7 1217 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 CD2APQ9Y5K6 639 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 GOLGA6L22H0YM25 854 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 PDE6BP35913 854 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 MAP2K2P36507 400 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 CTSWP56202 376 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 MTX1Q13505 466 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 UVSSAQ2YD98 709 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 FAM177A1Q8N128 213 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms