RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 COL1A1P02452 1464 aaPredicted RBP11.48□□□□□ -0.57
PROM1-204ENST00000503884 HTTP42858 3142 aa11.47□□□□□ -0.57
PROM1-204ENST00000503884 SSC5DA1L4H1 1573 aa11.47□□□□□ -0.57
PROM1-204ENST00000503884 ANKRD18BA2A2Z9 1011 aa11.47□□□□□ -0.57
PROM1-204ENST00000503884 SNAP23O00161 211 aa11.47□□□□□ -0.57
PROM1-204ENST00000503884 IL1R1P14778 569 aa11.47□□□□□ -0.57
PROM1-204ENST00000503884 GTF2IP78347 998 aa11.47□□□□□ -0.57
PROM1-204ENST00000503884 EXOSC9Q06265 439 aaKnown RBP11.47□□□□□ -0.57
PROM1-204ENST00000503884 LDLRAD1Q5T700 205 aa11.47□□□□□ -0.57
PROM1-204ENST00000503884 KIAA0825Q8IV33 1275 aa11.47□□□□□ -0.57
PROM1-204ENST00000503884 CFHR5Q9BXR6 569 aa11.47□□□□□ -0.57
PROM1-204ENST00000503884 FKBP1AP62942 108 aaKnown RBP11.46□□□□□ -0.57
PROM1-204ENST00000503884 PTPN12Q05209 780 aaKnown RBP11.46□□□□□ -0.57
PROM1-204ENST00000503884 MAP3K11Q16584 847 aa11.46□□□□□ -0.57
PROM1-204ENST00000503884 EPHA10Q5JZY3 1008 aa11.46□□□□□ -0.57
PROM1-204ENST00000503884 APOBEC3FQ8IUX4 373 aaKnown RBP11.46□□□□□ -0.57
PROM1-204ENST00000503884 FBXW7Q969H0 707 aa11.46□□□□□ -0.57
PROM1-204ENST00000503884 ARAP2Q8WZ64 1704 aa11.46□□□□□ -0.58
PROM1-204ENST00000503884 F6X3S4 739 aa11.45□□□□□ -0.58
PROM1-204ENST00000503884 TAF5LO75529 589 aa11.45□□□□□ -0.58
PROM1-204ENST00000503884 NF2P35240 595 aa11.45□□□□□ -0.58
PROM1-204ENST00000503884 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
PROM1-204ENST00000503884 ZNF296Q8WUU4 475 aaPredicted RBP11.45□□□□□ -0.58
PROM1-204ENST00000503884 HDAC9Q9UKV0 1011 aa11.45□□□□□ -0.58
PROM1-204ENST00000503884 CENPFP49454 3210 aa11.45□□□□□ -0.58
PROM1-204ENST00000503884 TBC1D8O95759 1140 aa11.44□□□□□ -0.58
PROM1-204ENST00000503884 IFIT5Q13325 482 aaKnown RBP11.44□□□□□ -0.58
PROM1-204ENST00000503884 SPRYD7Q5W111 196 aa11.44□□□□□ -0.58
PROM1-204ENST00000503884 LMBR1LQ6UX01 489 aa11.44□□□□□ -0.58
PROM1-204ENST00000503884 ARMC9Q7Z3E5 817 aa11.44□□□□□ -0.58
PROM1-204ENST00000503884 DEFB129Q9H1M3 183 aa11.44□□□□□ -0.58
PROM1-204ENST00000503884 PCDHAC2Q9Y5I4 1007 aa11.44□□□□□ -0.58
PROM1-204ENST00000503884 OTOFQ9HC10 1997 aa11.44□□□□□ -0.58
PROM1-204ENST00000503884 BRCA2P51587 3418 aa11.43□□□□□ -0.58
PROM1-204ENST00000503884 AOX1Q06278 1338 aa11.43□□□□□ -0.58
PROM1-204ENST00000503884 GPR25O00155 361 aa11.43□□□□□ -0.58
PROM1-204ENST00000503884 KCNJ4P48050 445 aa11.43□□□□□ -0.58
PROM1-204ENST00000503884 SOX10P56693 466 aa11.43□□□□□ -0.58
PROM1-204ENST00000503884 TTLL12Q14166 644 aaPredicted RBP11.43□□□□□ -0.58
PROM1-204ENST00000503884 DLGAP5Q15398 846 aa11.43□□□□□ -0.58
PROM1-204ENST00000503884 PKN2Q16513 984 aaKnown RBP11.43□□□□□ -0.58
PROM1-204ENST00000503884 MIER1Q8N108 512 aa11.43□□□□□ -0.58
PROM1-204ENST00000503884 KAZALD1Q96I82 304 aa11.43□□□□□ -0.58
PROM1-204ENST00000503884 ZNF594Q96JF6 807 aaPredicted RBP11.43□□□□□ -0.58
PROM1-204ENST00000503884 R3HDMLQ9H3Y0 253 aa11.43□□□□□ -0.58
PROM1-204ENST00000503884 FZD1Q9UP38 647 aa11.43□□□□□ -0.58
PROM1-204ENST00000503884 HPS5Q9UPZ3 1129 aa11.43□□□□□ -0.58
PROM1-204ENST00000503884 PPP2R3BQ9Y5P8 575 aa11.43□□□□□ -0.58
PROM1-204ENST00000503884 FAM205AQ6ZU69 1335 aa11.42□□□□□ -0.58
PROM1-204ENST00000503884 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
PROM1-204ENST00000503884 UNCXA6NJT0 531 aa11.42□□□□□ -0.58
PROM1-204ENST00000503884 GRM8O00222 908 aa11.42□□□□□ -0.58
PROM1-204ENST00000503884 ALDH1L1O75891 902 aa11.42□□□□□ -0.58
PROM1-204ENST00000503884 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
PROM1-204ENST00000503884 SREBF2Q12772 1141 aa11.42□□□□□ -0.58
PROM1-204ENST00000503884 ZNF804AQ7Z570 1209 aa11.42□□□□□ -0.58
PROM1-204ENST00000503884 PRMT6Q96LA8 375 aaPredicted RBP11.42□□□□□ -0.58
PROM1-204ENST00000503884 ANGEL1Q9UNK9 670 aaKnown RBP11.42□□□□□ -0.58
PROM1-204ENST00000503884 MKI67P46013 3256 aaKnown RBP11.42□□□□□ -0.58
PROM1-204ENST00000503884 ZBTB48P10074 688 aaPredicted RBP11.41□□□□□ -0.58
PROM1-204ENST00000503884 MKRN3Q13064 507 aaKnown RBP11.41□□□□□ -0.58
PROM1-204ENST00000503884 PRKG1Q13976 671 aa11.41□□□□□ -0.58
PROM1-204ENST00000503884 CFAP100Q494V2 611 aa11.41□□□□□ -0.58
PROM1-204ENST00000503884 LDHAL6AQ6ZMR3 332 aa11.41□□□□□ -0.58
PROM1-204ENST00000503884 FAM9BQ8IZU0 186 aa11.41□□□□□ -0.58
PROM1-204ENST00000503884 TDRD7Q8NHU6 1098 aaKnown RBP11.41□□□□□ -0.58
PROM1-204ENST00000503884 SALL2Q9Y467 1007 aaPredicted RBP11.41□□□□□ -0.58
PROM1-204ENST00000503884 UTYO14607 1347 aa11.4□□□□□ -0.58
PROM1-204ENST00000503884 ZNF521Q96K83 1311 aa11.4□□□□□ -0.58
PROM1-204ENST00000503884 INHBEP58166 350 aa11.4□□□□□ -0.58
PROM1-204ENST00000503884 UBE4AQ14139 1066 aa11.4□□□□□ -0.58
PROM1-204ENST00000503884 CCDC57Q2TAC2 916 aa11.4□□□□□ -0.58
PROM1-204ENST00000503884 CLMNQ96JQ2 1002 aa11.4□□□□□ -0.58
PROM1-204ENST00000503884 CHMP3Q9Y3E7 222 aa11.4□□□□□ -0.58
PROM1-204ENST00000503884 CLRN2A0PK11 232 aa11.39□□□□□ -0.59
PROM1-204ENST00000503884 MANSC4A6NHS7 340 aaPredicted RBP11.39□□□□□ -0.59
PROM1-204ENST00000503884 F8W031 263 aaPredicted RBP11.39□□□□□ -0.59
PROM1-204ENST00000503884 IGF2BP3O00425 579 aaKnown RBP eCLIP11.39□□□□□ -0.59
PROM1-204ENST00000503884 PPP1R12BO60237 982 aaPredicted RBP11.39□□□□□ -0.59
PROM1-204ENST00000503884 FKTNO75072 461 aa11.39□□□□□ -0.59
PROM1-204ENST00000503884 USP2O75604 605 aaPredicted RBP11.39□□□□□ -0.59
PROM1-204ENST00000503884 ALDH1A1P00352 501 aa11.39□□□□□ -0.59
PROM1-204ENST00000503884 NBPF7P0C2Y1 421 aaPredicted RBP11.39□□□□□ -0.59
PROM1-204ENST00000503884 RABL6Q3YEC7 729 aaPredicted RBP11.39□□□□□ -0.59
PROM1-204ENST00000503884 SPDYE2Q495Y8 402 aa11.39□□□□□ -0.59
PROM1-204ENST00000503884 NBPF12Q5TAG4 269 aaPredicted RBP11.39□□□□□ -0.59
PROM1-204ENST00000503884 FBXO46Q6PJ61 603 aaPredicted RBP11.39□□□□□ -0.59
PROM1-204ENST00000503884 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
PROM1-204ENST00000503884 SLC10A4Q96EP9 437 aa11.39□□□□□ -0.59
PROM1-204ENST00000503884 SUCLG2Q96I99 432 aa11.39□□□□□ -0.59
PROM1-204ENST00000503884 WNK4Q96J92 1243 aa11.39□□□□□ -0.59
PROM1-204ENST00000503884 FAM84BQ96KN1 310 aaPredicted RBP11.39□□□□□ -0.59
PROM1-204ENST00000503884 PUS3Q9BZE2 481 aaKnown RBP11.39□□□□□ -0.59
PROM1-204ENST00000503884 JAG2Q9Y219 1238 aa11.39□□□□□ -0.59
PROM1-204ENST00000503884 RIPOR2Q9Y4F9 1068 aa11.39□□□□□ -0.59
PROM1-204ENST00000503884 RBBP6Q7Z6E9 1792 aaKnown RBP11.39□□□□□ -0.59
PROM1-204ENST00000503884 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
PROM1-204ENST00000503884 MYO1BO43795 1136 aa11.38□□□□□ -0.59
PROM1-204ENST00000503884 GJA5P36382 358 aa11.38□□□□□ -0.59
PROM1-204ENST00000503884 RASA3Q14644 834 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms