RNA–Protein interactions for RNA: ENST00000503299.1

AC109349.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC109349.1, Length 758 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109349.1-201ENST00000503299 USP11P51784 963 aa8.35□□□□□ -1.07
AC109349.1-201ENST00000503299 TTC39BQ5VTQ0 682 aaPredicted RBP8.35□□□□□ -1.07
AC109349.1-201ENST00000503299 CEP120Q8N960 986 aa8.35□□□□□ -1.07
AC109349.1-201ENST00000503299 BHLHE22Q8NFJ8 381 aaPredicted RBP8.35□□□□□ -1.07
AC109349.1-201ENST00000503299 BCL7CQ8WUZ0 217 aaPredicted RBP8.35□□□□□ -1.07
AC109349.1-201ENST00000503299 CYP4F12Q9HCS2 524 aa8.35□□□□□ -1.07
AC109349.1-201ENST00000503299 PTK7Q13308 1070 aa8.34□□□□□ -1.07
AC109349.1-201ENST00000503299 DUSP27Q5VZP5 1158 aa8.34□□□□□ -1.07
AC109349.1-201ENST00000503299 CDPF1Q6NVV7 123 aa8.34□□□□□ -1.07
AC109349.1-201ENST00000503299 CILP2Q8IUL8 1156 aa8.34□□□□□ -1.07
AC109349.1-201ENST00000503299 MESP2Q0VG99 397 aa8.33□□□□□ -1.08
AC109349.1-201ENST00000503299 SLC7A3Q8WY07 619 aa8.33□□□□□ -1.08
AC109349.1-201ENST00000503299 GATA6Q92908 595 aa8.33□□□□□ -1.08
AC109349.1-201ENST00000503299 FAM84AQ96KN4 292 aa8.33□□□□□ -1.08
AC109349.1-201ENST00000503299 ARL4DP49703 201 aa8.32□□□□□ -1.08
AC109349.1-201ENST00000503299 CRTC2Q53ET0 693 aaPredicted RBP8.32□□□□□ -1.08
AC109349.1-201ENST00000503299 COX20Q5RI15 118 aa8.32□□□□□ -1.08
AC109349.1-201ENST00000503299 WFDC3Q8IUB2 231 aa8.32□□□□□ -1.08
AC109349.1-201ENST00000503299 GLIS3Q8NEA6 775 aa8.32□□□□□ -1.08
AC109349.1-201ENST00000503299 EZH1Q92800 747 aaPredicted RBP8.32□□□□□ -1.08
AC109349.1-201ENST00000503299 LRRC4CQ9HCJ2 640 aa8.32□□□□□ -1.08
AC109349.1-201ENST00000503299 C19orf57Q0VDD7 668 aa8.31□□□□□ -1.08
AC109349.1-201ENST00000503299 ZNF574Q6ZN55 896 aaPredicted RBP8.31□□□□□ -1.08
AC109349.1-201ENST00000503299 SPRED2Q7Z698 418 aa8.31□□□□□ -1.08
AC109349.1-201ENST00000503299 ETFBKMTQ8IXQ9 262 aa8.31□□□□□ -1.08
AC109349.1-201ENST00000503299 STK11IPQ8N1F8 1099 aa8.31□□□□□ -1.08
AC109349.1-201ENST00000503299 PIK3R5Q8WYR1 880 aa8.31□□□□□ -1.08
AC109349.1-201ENST00000503299 CLUAP1Q96AJ1 413 aa8.31□□□□□ -1.08
AC109349.1-201ENST00000503299 TOX2Q96NM4 488 aa8.31□□□□□ -1.08
AC109349.1-201ENST00000503299 CYP27A1Q02318 531 aa8.3□□□□□ -1.08
AC109349.1-201ENST00000503299 NCAPG2Q86XI2 1143 aa8.3□□□□□ -1.08
AC109349.1-201ENST00000503299 ANKMY2Q8IV38 441 aa8.3□□□□□ -1.08
AC109349.1-201ENST00000503299 YIPF2Q9BWQ6 316 aa8.3□□□□□ -1.08
AC109349.1-201ENST00000503299 DRD2P14416 443 aa8.29□□□□□ -1.08
AC109349.1-201ENST00000503299 CFPP27918 469 aa8.29□□□□□ -1.08
AC109349.1-201ENST00000503299 BUD31P41223 144 aaPredicted RBP8.29□□□□□ -1.08
AC109349.1-201ENST00000503299 POM121Q96HA1 1249 aa8.29□□□□□ -1.08
AC109349.1-201ENST00000503299 FAM13BQ9NYF5 915 aa8.29□□□□□ -1.08
AC109349.1-201ENST00000503299 A6NJR5 290 aa8.28□□□□□ -1.08
AC109349.1-201ENST00000503299 CYP2E1P05181 493 aaPredicted RBP8.28□□□□□ -1.08
AC109349.1-201ENST00000503299 HGSNATQ68CP4 663 aa8.28□□□□□ -1.08
AC109349.1-201ENST00000503299 C2CD4AQ8NCU7 369 aaPredicted RBP8.28□□□□□ -1.08
AC109349.1-201ENST00000503299 RC3H2Q9HBD1 1191 aaKnown RBP8.28□□□□□ -1.08
AC109349.1-201ENST00000503299 ABI2Q9NYB9 513 aaPredicted RBP8.28□□□□□ -1.08
AC109349.1-201ENST00000503299 TFIP11Q9UBB9 837 aaKnown RBP8.28□□□□□ -1.08
AC109349.1-201ENST00000503299 FNDC3AQ9Y2H6 1198 aaKnown RBP8.28□□□□□ -1.08
AC109349.1-201ENST00000503299 MAFBQ9Y5Q3 323 aaPredicted RBP8.28□□□□□ -1.08
AC109349.1-201ENST00000503299 BRD2P25440 801 aaKnown RBP8.27□□□□□ -1.09
AC109349.1-201ENST00000503299 LOC100289279A0A1B0GTE1 492 aa8.26□□□□□ -1.09
AC109349.1-201ENST00000503299 EXOSC6Q5RKV6 272 aaKnown RBP8.26□□□□□ -1.09
AC109349.1-201ENST00000503299 LCNL1Q6ZST4 164 aa8.26□□□□□ -1.09
AC109349.1-201ENST00000503299 ZNF765Q7L2R6 523 aa8.26□□□□□ -1.09
AC109349.1-201ENST00000503299 C1QL4Q86Z23 238 aa8.26□□□□□ -1.09
AC109349.1-201ENST00000503299 SIAH1Q8IUQ4 282 aa8.26□□□□□ -1.09
AC109349.1-201ENST00000503299 ZSCAN18Q8TBC5 510 aaPredicted RBP8.26□□□□□ -1.09
AC109349.1-201ENST00000503299 FAM196BA6NMK8 535 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP17L15C9J2P7 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP17L10C9JJH3 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP17L13C9JLJ4 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP17L12C9JPN9 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP17L11C9JVI0 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP17L21D6R901 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP17L18D6R9N7 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP17L22D6RA61 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP17L17D6RBQ6 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP17L19D6RCP7 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP17L20D6RJB6 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 DLGAP3O95886 979 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 FUT4P22083 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 RAP1GAPP47736 663 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 SOX4Q06945 474 aaPredicted RBP8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP17L24Q0WX57 530 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 MISP3Q96FF7 219 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 USP26Q9BXU7 913 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 SOX13Q9UN79 622 aa8.25□□□□□ -1.09
AC109349.1-201ENST00000503299 NFKBIEO00221 500 aa8.24□□□□□ -1.09
AC109349.1-201ENST00000503299 RNASE1P07998 156 aaKnown RBP8.24□□□□□ -1.09
AC109349.1-201ENST00000503299 KANK4Q5T7N3 995 aaPredicted RBP8.24□□□□□ -1.09
AC109349.1-201ENST00000503299 MBNL3Q9NUK0 354 aaKnown RBP8.24□□□□□ -1.09
AC109349.1-201ENST00000503299 SOX1O00570 391 aaPredicted RBP8.23□□□□□ -1.09
AC109349.1-201ENST00000503299 RAD21O60216 631 aa8.23□□□□□ -1.09
AC109349.1-201ENST00000503299 BNIP3Q12983 259 aa8.23□□□□□ -1.09
AC109349.1-201ENST00000503299 RAPGEFL1Q9UHV5 662 aa8.23□□□□□ -1.09
AC109349.1-201ENST00000503299 LRRC10BA6NIK2 292 aa8.22□□□□□ -1.09
AC109349.1-201ENST00000503299 ARID3CA6NKF2 412 aa8.22□□□□□ -1.09
AC109349.1-201ENST00000503299 PDE2AO00408 941 aaPredicted RBP8.22□□□□□ -1.09
AC109349.1-201ENST00000503299 MAP7Q14244 749 aa8.22□□□□□ -1.09
AC109349.1-201ENST00000503299 FAM26DQ5JW98 314 aa8.22□□□□□ -1.09
AC109349.1-201ENST00000503299 TTLL10Q6ZVT0 673 aa8.22□□□□□ -1.09
AC109349.1-201ENST00000503299 CCDC9Q9Y3X0 531 aaKnown RBP8.22□□□□□ -1.09
AC109349.1-201ENST00000503299 NFICP08651 508 aa8.21□□□□□ -1.1
AC109349.1-201ENST00000503299 LRRC56Q8IYG6 542 aaPredicted RBP8.21□□□□□ -1.1
AC109349.1-201ENST00000503299 DZANK1Q9NVP4 752 aa8.21□□□□□ -1.1
AC109349.1-201ENST00000503299 SALL4Q9UJQ4 1053 aa8.21□□□□□ -1.1
AC109349.1-201ENST00000503299 ADAMTS6Q9UKP5 1117 aa8.21□□□□□ -1.1
AC109349.1-201ENST00000503299 IKBKEQ14164 716 aa8.2□□□□□ -1.1
AC109349.1-201ENST00000503299 ARID3AQ99856 593 aa8.2□□□□□ -1.1
AC109349.1-201ENST00000503299 SAP130Q9H0E3 1048 aa8.2□□□□□ -1.1
AC109349.1-201ENST00000503299 FAM53CQ9NYF3 392 aa8.2□□□□□ -1.1
AC109349.1-201ENST00000503299 LMCD1Q9NZU5 365 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms