RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ALDH1L2Q3SY69 923 aa20.48■□□□□ 0.87
SCLT1-204ENST00000503215 ZNF804AQ7Z570 1209 aa20.48■□□□□ 0.87
SCLT1-204ENST00000503215 AOX1Q06278 1338 aa20.48■□□□□ 0.87
SCLT1-204ENST00000503215 UBE2Q2LH0YL09 131 aa20.47■□□□□ 0.87
SCLT1-204ENST00000503215 KIF23Q02241 960 aaPredicted RBP20.47■□□□□ 0.87
SCLT1-204ENST00000503215 FAM84BQ96KN1 310 aaPredicted RBP20.47■□□□□ 0.87
SCLT1-204ENST00000503215 UBE4AQ14139 1066 aa20.46■□□□□ 0.87
SCLT1-204ENST00000503215 HDAC9Q9UKV0 1011 aa20.46■□□□□ 0.87
SCLT1-204ENST00000503215 NOB1Q9ULX3 412 aaKnown RBP20.46■□□□□ 0.87
SCLT1-204ENST00000503215 TDRD7Q8NHU6 1098 aaKnown RBP20.46■□□□□ 0.87
SCLT1-204ENST00000503215 CCDC102AQ96A19 550 aa20.46■□□□□ 0.87
SCLT1-204ENST00000503215 SLC10A3P09131 477 aa20.45■□□□□ 0.86
SCLT1-204ENST00000503215 HIBADHP31937 336 aaKnown RBP20.45■□□□□ 0.86
SCLT1-204ENST00000503215 DLGAP5Q15398 846 aa20.44■□□□□ 0.86
SCLT1-204ENST00000503215 RASAL3Q86YV0 1011 aa20.44■□□□□ 0.86
SCLT1-204ENST00000503215 VGLL2Q8N8G2 317 aa20.44■□□□□ 0.86
SCLT1-204ENST00000503215 PRMT6Q96LA8 375 aaPredicted RBP20.44■□□□□ 0.86
SCLT1-204ENST00000503215 FZD1Q9UP38 647 aa20.44■□□□□ 0.86
SCLT1-204ENST00000503215 MROH5Q6ZUA9 1318 aa20.43■□□□□ 0.86
SCLT1-204ENST00000503215 RFX5P48382 616 aaPredicted RBP20.43■□□□□ 0.86
SCLT1-204ENST00000503215 MMP14P50281 582 aa20.43■□□□□ 0.86
SCLT1-204ENST00000503215 PRKG1Q13976 671 aa20.43■□□□□ 0.86
SCLT1-204ENST00000503215 CFAP100Q494V2 611 aa20.43■□□□□ 0.86
SCLT1-204ENST00000503215 METTL24Q5JXM2 366 aa20.43■□□□□ 0.86
SCLT1-204ENST00000503215 CSRNP1Q96S65 589 aa20.43■□□□□ 0.86
SCLT1-204ENST00000503215 IQSEC3Q9UPP2 1182 aaPredicted RBP20.43■□□□□ 0.86
SCLT1-204ENST00000503215 FAM205AQ6ZU69 1335 aa20.42■□□□□ 0.86
SCLT1-204ENST00000503215 CLRN2A0PK11 232 aa20.42■□□□□ 0.86
SCLT1-204ENST00000503215 FKBP1AP62942 108 aaKnown RBP20.42■□□□□ 0.86
SCLT1-204ENST00000503215 FKBP1BP68106 108 aa20.42■□□□□ 0.86
SCLT1-204ENST00000503215 GRIK5Q16478 980 aa20.42■□□□□ 0.86
SCLT1-204ENST00000503215 FBXO33Q7Z6M2 555 aa20.42■□□□□ 0.86
SCLT1-204ENST00000503215 MTMR14Q8NCE2 650 aa20.42■□□□□ 0.86
SCLT1-204ENST00000503215 CA12O43570 354 aa20.41■□□□□ 0.86
SCLT1-204ENST00000503215 RARSP54136 660 aaKnown RBP20.41■□□□□ 0.86
SCLT1-204ENST00000503215 TTLL12Q14166 644 aaPredicted RBP20.41■□□□□ 0.86
SCLT1-204ENST00000503215 APOBEC3FQ8IUX4 373 aaKnown RBP20.41■□□□□ 0.86
SCLT1-204ENST00000503215 PAPPA2Q9BXP8 1791 aa20.41■□□□□ 0.86
SCLT1-204ENST00000503215 CASP8AP2Q9UKL3 1982 aa20.4■□□□□ 0.86
SCLT1-204ENST00000503215 SPDYE2BA6NHP3 402 aa20.4■□□□□ 0.86
SCLT1-204ENST00000503215 PDE8BO95263 885 aa20.4■□□□□ 0.86
SCLT1-204ENST00000503215 CT47B1P0C2W7 299 aaPredicted RBP20.4■□□□□ 0.86
SCLT1-204ENST00000503215 SPDYE6P0CI01 402 aa20.4■□□□□ 0.86
SCLT1-204ENST00000503215 MFSD14BQ5SR56 506 aa20.4■□□□□ 0.86
SCLT1-204ENST00000503215 DEFB129Q9H1M3 183 aa20.4■□□□□ 0.86
SCLT1-204ENST00000503215 RNF186Q9NXI6 227 aa20.4■□□□□ 0.86
SCLT1-204ENST00000503215 TRPA1O75762 1119 aa20.39■□□□□ 0.85
SCLT1-204ENST00000503215 BCAMP50895 628 aa20.39■□□□□ 0.85
SCLT1-204ENST00000503215 PTPN12Q05209 780 aaKnown RBP20.39■□□□□ 0.85
SCLT1-204ENST00000503215 MIER1Q8N108 512 aa20.39■□□□□ 0.85
SCLT1-204ENST00000503215 RBM5P52756 815 aaKnown RBP eCLIP20.38■□□□□ 0.85
SCLT1-204ENST00000503215 ABHD8Q96I13 439 aa20.38■□□□□ 0.85
SCLT1-204ENST00000503215 TTF2Q9UNY4 1162 aaKnown RBP20.38■□□□□ 0.85
SCLT1-204ENST00000503215 EYA2O00167 538 aa20.37■□□□□ 0.85
SCLT1-204ENST00000503215 FGFR2P21802 821 aa20.37■□□□□ 0.85
SCLT1-204ENST00000503215 MKRN3Q13064 507 aaKnown RBP20.37■□□□□ 0.85
SCLT1-204ENST00000503215 CHAF1AQ13111 956 aaPredicted RBP20.37■□□□□ 0.85
SCLT1-204ENST00000503215 ATG9AQ7Z3C6 839 aa20.37■□□□□ 0.85
SCLT1-204ENST00000503215 VEZTQ9HBM0 779 aa20.37■□□□□ 0.85
SCLT1-204ENST00000503215 TNNQ9UQP3 1299 aa20.37■□□□□ 0.85
SCLT1-204ENST00000503215 UBTFL1P0CB47 393 aaPredicted RBP20.36■□□□□ 0.85
SCLT1-204ENST00000503215 NF2P35240 595 aa20.36■□□□□ 0.85
SCLT1-204ENST00000503215 VPS37DQ86XT2 251 aa20.36■□□□□ 0.85
SCLT1-204ENST00000503215 MEIS3Q99687 375 aa20.36■□□□□ 0.85
SCLT1-204ENST00000503215 API5Q9BZZ5 524 aaKnown RBP20.36■□□□□ 0.85
SCLT1-204ENST00000503215 LRRFIP2Q9Y608 721 aaKnown RBP20.36■□□□□ 0.85
SCLT1-204ENST00000503215 LDLRAD1Q5T700 205 aa20.35■□□□□ 0.85
SCLT1-204ENST00000503215 SIL1Q9H173 461 aa20.35■□□□□ 0.85
SCLT1-204ENST00000503215 ANGEL1Q9UNK9 670 aaKnown RBP20.35■□□□□ 0.85
SCLT1-204ENST00000503215 SSC5DA1L4H1 1573 aa20.35■□□□□ 0.85
SCLT1-204ENST00000503215 NBPF12Q5TAG4 269 aaPredicted RBP20.34■□□□□ 0.85
SCLT1-204ENST00000503215 TDRD3Q9H7E2 651 aaKnown RBP20.34■□□□□ 0.85
SCLT1-204ENST00000503215 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.34■□□□□ 0.85
SCLT1-204ENST00000503215 ZNF70Q9UC06 446 aaPredicted RBP20.34■□□□□ 0.85
SCLT1-204ENST00000503215 PA2G4Q9UQ80 394 aaKnown RBP20.34■□□□□ 0.85
SCLT1-204ENST00000503215 MYO1BO43795 1136 aa20.34■□□□□ 0.85
SCLT1-204ENST00000503215 BCAR3O75815 825 aa20.34■□□□□ 0.85
SCLT1-204ENST00000503215 RASA3Q14644 834 aa20.34■□□□□ 0.85
SCLT1-204ENST00000503215 PUM3Q15397 648 aaKnown RBP20.34■□□□□ 0.85
SCLT1-204ENST00000503215 CAVIN4Q5BKX8 364 aa20.34■□□□□ 0.85
SCLT1-204ENST00000503215 ARMC9Q7Z3E5 817 aa20.34■□□□□ 0.85
SCLT1-204ENST00000503215 CDAN1Q8IWY9 1227 aa20.34■□□□□ 0.85
SCLT1-204ENST00000503215 DZIP1LQ8IYY4 767 aaKnown RBP20.34■□□□□ 0.85
SCLT1-204ENST00000503215 SAGE1Q9NXZ1 904 aa20.34■□□□□ 0.85
SCLT1-204ENST00000503215 FRAT2O75474 233 aaPredicted RBP20.33■□□□□ 0.84
SCLT1-204ENST00000503215 CRKP46108 304 aa20.33■□□□□ 0.84
SCLT1-204ENST00000503215 SPDYE2Q495Y8 402 aa20.33■□□□□ 0.84
SCLT1-204ENST00000503215 CLMNQ96JQ2 1002 aa20.33■□□□□ 0.84
SCLT1-204ENST00000503215 MCOLN1Q9GZU1 580 aa20.33■□□□□ 0.84
SCLT1-204ENST00000503215 SERPINA10Q9UK55 444 aa20.33■□□□□ 0.84
SCLT1-204ENST00000503215 IFIT1P09914 478 aaKnown RBP20.32■□□□□ 0.84
SCLT1-204ENST00000503215 INTS3Q68E01 1043 aaKnown RBP20.31■□□□□ 0.84
SCLT1-204ENST00000503215 ARHGAP45Q92619 1136 aa20.31■□□□□ 0.84
SCLT1-204ENST00000503215 DGKZQ13574 1117 aa20.3■□□□□ 0.84
SCLT1-204ENST00000503215 DIEXFQ68CQ4 756 aaKnown RBP20.3■□□□□ 0.84
SCLT1-204ENST00000503215 LPIN2Q92539 896 aa20.3■□□□□ 0.84
SCLT1-204ENST00000503215 PPP2R3BQ9Y5P8 575 aa20.3■□□□□ 0.84
SCLT1-204ENST00000503215 COL1A1P02452 1464 aaPredicted RBP20.3■□□□□ 0.84
SCLT1-204ENST00000503215 AKAP11Q9UKA4 1901 aa20.29■□□□□ 0.84
SCLT1-204ENST00000503215 CCDC85CA6NKD9 419 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms