RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 CELA3AP09093 270 aa12.88□□□□□ -0.35
EXOSC9-203ENST00000503139 PTPRAP18433 802 aa12.88□□□□□ -0.35
EXOSC9-203ENST00000503139 SLC16A10Q8TF71 515 aa12.88□□□□□ -0.35
EXOSC9-203ENST00000503139 SREK1Q8WXA9 508 aaKnown RBP12.88□□□□□ -0.35
EXOSC9-203ENST00000503139 CLEC4MQ9H2X3 399 aaPredicted RBP12.88□□□□□ -0.35
EXOSC9-203ENST00000503139 EPXP11678 715 aa12.87□□□□□ -0.35
EXOSC9-203ENST00000503139 ACDQ96AP0 544 aa12.87□□□□□ -0.35
EXOSC9-203ENST00000503139 C20orf204Q6ZNR8 217 aa12.86□□□□□ -0.35
EXOSC9-203ENST00000503139 C1orf229Q6ZS94 237 aaPredicted RBP12.86□□□□□ -0.35
EXOSC9-203ENST00000503139 SLC43A3Q8NBI5 491 aa12.86□□□□□ -0.35
EXOSC9-203ENST00000503139 CAPN10Q9HC96 672 aa12.86□□□□□ -0.35
EXOSC9-203ENST00000503139 B3GALT4O96024 378 aa12.85□□□□□ -0.35
EXOSC9-203ENST00000503139 RLBP1P12271 317 aa12.85□□□□□ -0.35
EXOSC9-203ENST00000503139 ALAS2P22557 587 aa12.85□□□□□ -0.35
EXOSC9-203ENST00000503139 PWP1Q13610 501 aa12.85□□□□□ -0.35
EXOSC9-203ENST00000503139 GRIK5Q16478 980 aa12.85□□□□□ -0.35
EXOSC9-203ENST00000503139 IRF7Q92985 503 aa12.85□□□□□ -0.35
EXOSC9-203ENST00000503139 TMEM74Q96NL1 305 aa12.85□□□□□ -0.35
EXOSC9-203ENST00000503139 LACRTQ9GZZ8 138 aa12.85□□□□□ -0.35
EXOSC9-203ENST00000503139 USP35Q9P2H5 1018 aa12.85□□□□□ -0.35
EXOSC9-203ENST00000503139 PAGE1O75459 146 aa12.84□□□□□ -0.35
EXOSC9-203ENST00000503139 ADAMTS2O95450 1211 aa12.84□□□□□ -0.35
EXOSC9-203ENST00000503139 PCDH1Q08174 1060 aa12.84□□□□□ -0.35
EXOSC9-203ENST00000503139 ZNF423Q2M1K9 1284 aa12.84□□□□□ -0.35
EXOSC9-203ENST00000503139 RHOVQ96L33 236 aa12.84□□□□□ -0.35
EXOSC9-203ENST00000503139 GPN3Q9UHW5 284 aaPredicted RBP12.84□□□□□ -0.35
EXOSC9-203ENST00000503139 F6X3S4 739 aa12.83□□□□□ -0.36
EXOSC9-203ENST00000503139 RGS9O75916 674 aaPredicted RBP12.83□□□□□ -0.36
EXOSC9-203ENST00000503139 LIG3P49916 1009 aa12.83□□□□□ -0.36
EXOSC9-203ENST00000503139 MAP3K11Q16584 847 aa12.83□□□□□ -0.36
EXOSC9-203ENST00000503139 RELL1Q8IUW5 271 aa12.83□□□□□ -0.36
EXOSC9-203ENST00000503139 PHC3Q8NDX5 983 aa12.83□□□□□ -0.36
EXOSC9-203ENST00000503139 NUDT8Q8WV74 236 aa12.83□□□□□ -0.36
EXOSC9-203ENST00000503139 SH2B1Q9NRF2 756 aaPredicted RBP12.83□□□□□ -0.36
EXOSC9-203ENST00000503139 TMEM39AQ9NV64 488 aa12.83□□□□□ -0.36
EXOSC9-203ENST00000503139 ALBP02768 609 aa12.82□□□□□ -0.36
EXOSC9-203ENST00000503139 GDF6Q6KF10 455 aaPredicted RBP12.82□□□□□ -0.36
EXOSC9-203ENST00000503139 ADAMTS1Q9UHI8 967 aa12.82□□□□□ -0.36
EXOSC9-203ENST00000503139 INPP5FQ9Y2H2 1132 aa12.82□□□□□ -0.36
EXOSC9-203ENST00000503139 ESRRAP11474 423 aaPredicted RBP12.81□□□□□ -0.36
EXOSC9-203ENST00000503139 EPHA1P21709 976 aa12.81□□□□□ -0.36
EXOSC9-203ENST00000503139 CDC27P30260 824 aa12.81□□□□□ -0.36
EXOSC9-203ENST00000503139 GBP2P32456 591 aaPredicted RBP12.81□□□□□ -0.36
EXOSC9-203ENST00000503139 GJA8P48165 433 aa12.81□□□□□ -0.36
EXOSC9-203ENST00000503139 LCE2CQ5TA81 110 aa12.81□□□□□ -0.36
EXOSC9-203ENST00000503139 CACTIN-AS1Q8N1I8 211 aa12.81□□□□□ -0.36
EXOSC9-203ENST00000503139 DRC1Q96MC2 740 aa12.81□□□□□ -0.36
EXOSC9-203ENST00000503139 KCNQ5Q9NR82 932 aa12.81□□□□□ -0.36
EXOSC9-203ENST00000503139 SLURP2P0DP57 97 aa12.8□□□□□ -0.36
EXOSC9-203ENST00000503139 SF3A1Q15459 793 aaKnown RBP12.8□□□□□ -0.36
EXOSC9-203ENST00000503139 KANK3Q6NY19 840 aa12.8□□□□□ -0.36
EXOSC9-203ENST00000503139 JPH1Q9HDC5 661 aaPredicted RBP12.8□□□□□ -0.36
EXOSC9-203ENST00000503139 TLR6Q9Y2C9 796 aa12.8□□□□□ -0.36
EXOSC9-203ENST00000503139 BAG6P46379 1132 aa12.79□□□□□ -0.36
EXOSC9-203ENST00000503139 ZNF157P51786 506 aaPredicted RBP12.79□□□□□ -0.36
EXOSC9-203ENST00000503139 PAK2Q13177 524 aa12.79□□□□□ -0.36
EXOSC9-203ENST00000503139 GNL2Q13823 731 aaKnown RBP12.79□□□□□ -0.36
EXOSC9-203ENST00000503139 TTBK2Q6IQ55 1244 aa12.79□□□□□ -0.36
EXOSC9-203ENST00000503139 AGMOQ6ZNB7 445 aa12.79□□□□□ -0.36
EXOSC9-203ENST00000503139 GMLQ99445 158 aa12.79□□□□□ -0.36
EXOSC9-203ENST00000503139 MINDY4BA8MYZ0 360 aa12.78□□□□□ -0.36
EXOSC9-203ENST00000503139 GARTP22102 1010 aa12.78□□□□□ -0.36
EXOSC9-203ENST00000503139 EIF4A3P38919 411 aaKnown RBP12.78□□□□□ -0.36
EXOSC9-203ENST00000503139 AFF1P51825 1210 aaKnown RBP12.78□□□□□ -0.36
EXOSC9-203ENST00000503139 RPS26P62854 115 aaKnown RBP12.78□□□□□ -0.36
EXOSC9-203ENST00000503139 PCNX4Q63HM2 1172 aa12.78□□□□□ -0.36
EXOSC9-203ENST00000503139 EDARADDQ8WWZ3 215 aa12.78□□□□□ -0.36
EXOSC9-203ENST00000503139 SPON2Q9BUD6 331 aa12.78□□□□□ -0.36
EXOSC9-203ENST00000503139 H3BRJ5 948 aa12.77□□□□□ -0.37
EXOSC9-203ENST00000503139 OIP5O43482 229 aa12.77□□□□□ -0.37
EXOSC9-203ENST00000503139 PPP2R3AQ06190 1150 aa12.77□□□□□ -0.37
EXOSC9-203ENST00000503139 IKBKEQ14164 716 aa12.77□□□□□ -0.37
EXOSC9-203ENST00000503139 RASIP1Q5U651 963 aa12.77□□□□□ -0.37
EXOSC9-203ENST00000503139 CHSY3Q70JA7 882 aa12.77□□□□□ -0.37
EXOSC9-203ENST00000503139 KIAA0825Q8IV33 1275 aa12.77□□□□□ -0.37
EXOSC9-203ENST00000503139 TFE3P19532 575 aaPredicted RBP12.76□□□□□ -0.37
EXOSC9-203ENST00000503139 BMP6P22004 513 aa12.76□□□□□ -0.37
EXOSC9-203ENST00000503139 LMNB2Q03252 620 aa12.76□□□□□ -0.37
EXOSC9-203ENST00000503139 GALNT6Q8NCL4 622 aa12.76□□□□□ -0.37
EXOSC9-203ENST00000503139 LRRC4BQ9NT99 713 aa12.76□□□□□ -0.37
EXOSC9-203ENST00000503139 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 SHISA8B8ZZ34 492 aa12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 SOX1O00570 391 aaPredicted RBP12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 PF4P02776 101 aa12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 NME2P22392 152 aa12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 CABP4P57796 275 aa12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 FBXL19Q6PCT2 694 aa12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 C8orf86Q6ZUL3 223 aa12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 IL22RA1Q8N6P7 574 aa12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 RASGRP4Q8TDF6 673 aa12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 STK35Q8TDR2 534 aa12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 ZNF296Q8WUU4 475 aaPredicted RBP12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 GPRASP2Q96D09 838 aa12.75□□□□□ -0.37
EXOSC9-203ENST00000503139 M0R082 166 aa12.74□□□□□ -0.37
EXOSC9-203ENST00000503139 CAMK2GQ13555 558 aaPredicted RBP12.74□□□□□ -0.37
EXOSC9-203ENST00000503139 ZNF417Q8TAU3 575 aa12.74□□□□□ -0.37
EXOSC9-203ENST00000503139 BTBD6Q96KE9 485 aa12.74□□□□□ -0.37
EXOSC9-203ENST00000503139 ZNF587Q96SQ5 575 aaPredicted RBP12.74□□□□□ -0.37
EXOSC9-203ENST00000503139 SOX17Q9H6I2 414 aaPredicted RBP12.74□□□□□ -0.37
EXOSC9-203ENST00000503139 PRDM6Q9NQX0 595 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms