RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 BPIFA3Q9BQP9 254 aa28.54■■■□□ 2.16
DDX41-202ENST00000503078 KIAA1468Q9P260 1216 aa28.54■■■□□ 2.16
DDX41-202ENST00000503078 STRCP1A6NGW2 1772 aa28.54■■■□□ 2.16
DDX41-202ENST00000503078 KIF2AO00139 706 aaPredicted RBP28.53■■■□□ 2.16
DDX41-202ENST00000503078 IL15P40933 162 aaPredicted RBP28.53■■■□□ 2.16
DDX41-202ENST00000503078 ZNF397Q8NF99 534 aaPredicted RBP28.53■■■□□ 2.16
DDX41-202ENST00000503078 MORC2Q9Y6X9 1032 aaPredicted RBP28.53■■■□□ 2.16
DDX41-202ENST00000503078 MEGF6O75095 1541 aa28.53■■■□□ 2.16
DDX41-202ENST00000503078 IFIT1P09914 478 aaKnown RBP28.53■■■□□ 2.16
DDX41-202ENST00000503078 ERO1AQ96HE7 468 aa28.53■■■□□ 2.16
DDX41-202ENST00000503078 DCAF5Q96JK2 942 aa28.53■■■□□ 2.16
DDX41-202ENST00000503078 STK38Q15208 465 aa28.52■■■□□ 2.16
DDX41-202ENST00000503078 KCNG4Q8TDN1 519 aa28.52■■■□□ 2.16
DDX41-202ENST00000503078 SF3A1Q15459 793 aaKnown RBP28.52■■■□□ 2.16
DDX41-202ENST00000503078 ZRSR1Q15695 479 aaKnown RBP28.52■■■□□ 2.16
DDX41-202ENST00000503078 ATF3P18847 181 aa28.51■■■□□ 2.15
DDX41-202ENST00000503078 DCCP43146 1447 aa28.51■■■□□ 2.15
DDX41-202ENST00000503078 DPCR1Q3MIW9 517 aa28.51■■■□□ 2.15
DDX41-202ENST00000503078 TTLL5Q6EMB2 1281 aa28.51■■■□□ 2.15
DDX41-202ENST00000503078 CLIC4Q9Y696 253 aa28.51■■■□□ 2.15
DDX41-202ENST00000503078 M0R2C6 588 aa28.5■■■□□ 2.15
DDX41-202ENST00000503078 YEATS4O95619 227 aa28.5■■■□□ 2.15
DDX41-202ENST00000503078 POLR3EQ9NVU0 708 aa28.5■■■□□ 2.15
DDX41-202ENST00000503078 SPEF2Q9C093 1822 aa28.5■■■□□ 2.15
DDX41-202ENST00000503078 GABPB1Q06547 395 aaPredicted RBP28.5■■■□□ 2.15
DDX41-202ENST00000503078 C8orf76Q96K31 380 aa28.5■■■□□ 2.15
DDX41-202ENST00000503078 BCL11BQ9C0K0 894 aaPredicted RBP28.5■■■□□ 2.15
DDX41-202ENST00000503078 KMT5BQ4FZB7 885 aa28.49■■■□□ 2.15
DDX41-202ENST00000503078 CCDC150Q8NCX0 1101 aa28.49■■■□□ 2.15
DDX41-202ENST00000503078 SLU7O95391 586 aaKnown RBP28.48■■■□□ 2.15
DDX41-202ENST00000503078 OTUD7BQ6GQQ9 843 aa28.48■■■□□ 2.15
DDX41-202ENST00000503078 NEDD4P46934 1319 aa28.48■■■□□ 2.15
DDX41-202ENST00000503078 EYA2O00167 538 aa28.48■■■□□ 2.15
DDX41-202ENST00000503078 XPO4Q9C0E2 1151 aaKnown RBP28.48■■■□□ 2.15
DDX41-202ENST00000503078 GPHNQ9NQX3 736 aaPredicted RBP28.48■■■□□ 2.15
DDX41-202ENST00000503078 SPTLC2O15270 562 aa28.47■■■□□ 2.15
DDX41-202ENST00000503078 CWC25Q9NXE8 425 aaPredicted RBP28.47■■■□□ 2.15
DDX41-202ENST00000503078 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.47■■■□□ 2.15
DDX41-202ENST00000503078 V9GYY5 206 aaPredicted RBP28.47■■■□□ 2.15
DDX41-202ENST00000503078 LAMB4A4D0S4 1761 aa28.47■■■□□ 2.15
DDX41-202ENST00000503078 A0A1B0GUL7 405 aa28.47■■■□□ 2.15
DDX41-202ENST00000503078 CYP27B1O15528 508 aa28.47■■■□□ 2.15
DDX41-202ENST00000503078 SMC2O95347 1197 aa28.47■■■□□ 2.15
DDX41-202ENST00000503078 POLR3DP05423 398 aaPredicted RBP28.47■■■□□ 2.15
DDX41-202ENST00000503078 LRRC24Q50LG9 513 aa28.47■■■□□ 2.15
DDX41-202ENST00000503078 BRAPQ7Z569 592 aa28.47■■■□□ 2.15
DDX41-202ENST00000503078 FBXO18Q8NFZ0 1043 aa28.47■■■□□ 2.15
DDX41-202ENST00000503078 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.47■■■□□ 2.15
DDX41-202ENST00000503078 OSBP2Q969R2 916 aa28.47■■■□□ 2.15
DDX41-202ENST00000503078 IFNKQ9P0W0 207 aa28.47■■■□□ 2.15
DDX41-202ENST00000503078 DHX16O60231 1041 aaKnown RBP28.46■■■□□ 2.15
DDX41-202ENST00000503078 E4F1Q66K89 784 aaPredicted RBP28.46■■■□□ 2.15
DDX41-202ENST00000503078 IGSF3O75054 1194 aa28.46■■■□□ 2.15
DDX41-202ENST00000503078 SLC3A2P08195 630 aaKnown RBP28.46■■■□□ 2.15
DDX41-202ENST00000503078 MYSM1Q5VVJ2 828 aa28.46■■■□□ 2.15
DDX41-202ENST00000503078 NLRP12P59046 1061 aa28.45■■■□□ 2.15
DDX41-202ENST00000503078 TPM4P67936 248 aa28.45■■■□□ 2.15
DDX41-202ENST00000503078 DHX8Q14562 1220 aaKnown RBP28.45■■■□□ 2.15
DDX41-202ENST00000503078 ARMCX5Q6P1M9 558 aa28.45■■■□□ 2.15
DDX41-202ENST00000503078 TMC6Q7Z403 805 aa28.45■■■□□ 2.15
DDX41-202ENST00000503078 CABP4P57796 275 aa28.45■■■□□ 2.14
DDX41-202ENST00000503078 ELF2Q15723 593 aa28.45■■■□□ 2.14
DDX41-202ENST00000503078 GLI3P10071 1580 aa28.44■■■□□ 2.14
DDX41-202ENST00000503078 PSDA5PKW4 1024 aaPredicted RBP28.44■■■□□ 2.14
DDX41-202ENST00000503078 KCNJ6P48051 423 aa28.44■■■□□ 2.14
DDX41-202ENST00000503078 IMMTQ16891 758 aaKnown RBP28.44■■■□□ 2.14
DDX41-202ENST00000503078 ZNF594Q96JF6 807 aaPredicted RBP28.44■■■□□ 2.14
DDX41-202ENST00000503078 ORC3Q9UBD5 711 aaPredicted RBP28.44■■■□□ 2.14
DDX41-202ENST00000503078 CIAO1O76071 339 aa28.44■■■□□ 2.14
DDX41-202ENST00000503078 ZNF202O95125 648 aa28.44■■■□□ 2.14
DDX41-202ENST00000503078 LRRFIP1Q32MZ4 808 aaKnown RBP28.44■■■□□ 2.14
DDX41-202ENST00000503078 DDX17Q92841 729 aaKnown RBP28.44■■■□□ 2.14
DDX41-202ENST00000503078 PPP1R13BQ96KQ4 1090 aa28.44■■■□□ 2.14
DDX41-202ENST00000503078 KLF18A0A0U1RQI7 1052 aa28.43■■■□□ 2.14
DDX41-202ENST00000503078 NBPF26B4DH59 902 aa28.43■■■□□ 2.14
DDX41-202ENST00000503078 SFPQP23246 707 aaKnown RBP eCLIP28.43■■■□□ 2.14
DDX41-202ENST00000503078 NBPF14Q5TI25 921 aa28.43■■■□□ 2.14
DDX41-202ENST00000503078 NBPF10Q6P3W6 841 aaKnown RBP28.43■■■□□ 2.14
DDX41-202ENST00000503078 FBXO38Q6PIJ6 1188 aa28.43■■■□□ 2.14
DDX41-202ENST00000503078 KRT222Q8N1A0 295 aa28.43■■■□□ 2.14
DDX41-202ENST00000503078 NBPF15Q8N660 670 aa28.43■■■□□ 2.14
DDX41-202ENST00000503078 HPS5Q9UPZ3 1129 aa28.43■■■□□ 2.14
DDX41-202ENST00000503078 NWD2Q9ULI1 1742 aa28.43■■■□□ 2.14
DDX41-202ENST00000503078 PRC1O43663 620 aa28.43■■■□□ 2.14
DDX41-202ENST00000503078 SYNE3Q6ZMZ3 975 aa28.43■■■□□ 2.14
DDX41-202ENST00000503078 L2HGDHQ9H9P8 463 aa28.43■■■□□ 2.14
DDX41-202ENST00000503078 GOLGA8BA8MQT2 603 aa28.42■■■□□ 2.14
DDX41-202ENST00000503078 CSB-PGBD3P0DP91 1061 aa28.42■■■□□ 2.14
DDX41-202ENST00000503078 HAND2P61296 217 aa28.42■■■□□ 2.14
DDX41-202ENST00000503078 ATG3Q9NT62 314 aa28.42■■■□□ 2.14
DDX41-202ENST00000503078 PLEKHG2Q9H7P9 1386 aa28.42■■■□□ 2.14
DDX41-202ENST00000503078 TJP1Q07157 1748 aa28.42■■■□□ 2.14
DDX41-202ENST00000503078 BIN1O00499 593 aa28.42■■■□□ 2.14
DDX41-202ENST00000503078 FOXP2O15409 715 aa28.42■■■□□ 2.14
DDX41-202ENST00000503078 FKBP4Q02790 459 aaKnown RBP eCLIP28.42■■■□□ 2.14
DDX41-202ENST00000503078 NCAPHQ15003 741 aa28.42■■■□□ 2.14
DDX41-202ENST00000503078 MB21D2Q8IYB1 491 aaPredicted RBP28.42■■■□□ 2.14
DDX41-202ENST00000503078 NRDCO43847 1150 aa28.41■■■□□ 2.14
DDX41-202ENST00000503078 ANO1Q5XXA6 986 aa28.41■■■□□ 2.14
DDX41-202ENST00000503078 TTLL7Q6ZT98 887 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms