RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 ZSCAN9O15535 394 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-203ENST00000502998 KRT38O76015 456 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 PECAM1P16284 738 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-203ENST00000502998 GCFC2P16383 781 aaKnown RBP7.57□□□□□ -1.2
CLCN3-203ENST00000502998 ZNF24P17028 368 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 TBC1D8BQ0IIM8 1120 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 KRT72Q14CN4 511 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 ZRSR1Q15695 479 aaKnown RBP7.57□□□□□ -1.2
CLCN3-203ENST00000502998 LMOD2Q6P5Q4 547 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 KCNV1Q6PIU1 500 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 POTEBQ6S5H4 581 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 UBE2Q1Q7Z7E8 422 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 UNC5CLQ8IV45 518 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 SEPT12Q8IYM1 358 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 PDILTQ8N807 584 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 C1orf131Q8NDD1 294 aaKnown RBP7.57□□□□□ -1.2
CLCN3-203ENST00000502998 KIF18AQ8NI77 898 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 ZNF483Q8TF39 744 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-203ENST00000502998 THOC1Q96FV9 657 aaKnown RBP7.57□□□□□ -1.2
CLCN3-203ENST00000502998 IFT122Q9HBG6 1241 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 ZNF446Q9NWS9 450 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 CHMP5Q9NZZ3 219 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 RRP15Q9Y3B9 282 aaKnown RBP7.57□□□□□ -1.2
CLCN3-203ENST00000502998 ADGRB2O60241 1585 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.57□□□□□ -1.2
CLCN3-203ENST00000502998 TNS3Q68CZ2 1445 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 CCDC194A0A1B0GVG4 234 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 FAM205CA6NFA0 338 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 ONECUT3O60422 494 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-203ENST00000502998 E2F6O75461 281 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 SASH1O94885 1247 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 TRIM37O94972 964 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 IVLP07476 585 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 MSL3P1P0C860 447 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 CHMLP26374 656 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 GOLGA2Q08379 1002 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 MKRN3Q13064 507 aaKnown RBP7.56□□□□□ -1.2
CLCN3-203ENST00000502998 DDX10Q13206 875 aaKnown RBP7.56□□□□□ -1.2
CLCN3-203ENST00000502998 BARGINQ6ZT62 677 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 ZNF467Q7Z7K2 595 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-203ENST00000502998 C11orf96Q7Z7L8 435 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 GOLGA5Q8TBA6 731 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 BAG1Q99933 345 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-203ENST00000502998 MAK16Q9BXY0 300 aaKnown RBP7.56□□□□□ -1.2
CLCN3-203ENST00000502998 SLKQ9H2G2 1235 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-203ENST00000502998 INCENPQ9NQS7 918 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 HOXC10Q9NYD6 342 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 SPATA7Q9P0W8 599 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 ITM2BQ9Y287 266 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 TMEM98Q9Y2Y6 226 aa7.56□□□□□ -1.2
CLCN3-203ENST00000502998 ANKARQ7Z5J8 1434 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 H7C1W4 665 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 FMNL1O95466 1100 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-203ENST00000502998 TPP2P29144 1249 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-203ENST00000502998 ABL2P42684 1182 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 CDR1P51861 262 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 MNAT1P51948 309 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 ZNF132P52740 706 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 TPM4P67936 248 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 PSME1Q06323 249 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 NEDD9Q14511 834 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 PKN1Q16512 942 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 CDC37L1Q7L3B6 337 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 PACS2Q86VP3 889 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 LCA5Q86VQ0 697 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 TTC30AQ86WT1 665 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 LMNTD2Q8IXW0 634 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 MYO1HQ8N1T3 1032 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 FBXO18Q8NFZ0 1043 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 CABLES1Q8TDN4 633 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 PIBF1Q8WXW3 757 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 KIF1BPQ96EK5 621 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 SCYL1Q96KG9 808 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 FAM107BQ9H098 131 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 HOMER3Q9NSC5 361 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 EXOC1Q9NV70 894 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 QPCTLQ9NXS2 382 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 CLIP2Q9UDT6 1046 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 SBNO1A3KN83 1393 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 ABCA3Q99758 1704 aa7.55□□□□□ -1.2
CLCN3-203ENST00000502998 MINK1Q8N4C8 1332 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-203ENST00000502998 SLC27A2O14975 620 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 U2SURPO15042 1029 aaKnown RBP7.54□□□□□ -1.2
CLCN3-203ENST00000502998 NPHP1O15259 732 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 FCHSD2O94868 740 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 RPL17P18621 184 aaKnown RBP7.54□□□□□ -1.2
CLCN3-203ENST00000502998 YY1P25490 414 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 HOXA10P31260 410 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-203ENST00000502998 ELF1P32519 619 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 EN1Q05925 392 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-203ENST00000502998 FKBP5Q13451 457 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-203ENST00000502998 R3HDM1Q15032 1099 aaKnown RBP7.54□□□□□ -1.2
CLCN3-203ENST00000502998 POSTNQ15063 836 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 E2F4Q16254 413 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 INF2Q27J81 1249 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 CCDC92Q53HC0 331 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-203ENST00000502998 FAM182BQ5T319 152 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 SFMBT2Q5VUG0 894 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 KIAA1328Q86T90 577 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 ANKRD18AQ8IVF6 992 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms