RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 FBXW7Q969H0 707 aa16.3■□□□□ 0.2
LMNA-218ENST00000502357 PTPN22Q9Y2R2 807 aa16.3■□□□□ 0.2
LMNA-218ENST00000502357 OTOFQ9HC10 1997 aa16.29■□□□□ 0.2
LMNA-218ENST00000502357 UNCXA6NJT0 531 aa16.29■□□□□ 0.2
LMNA-218ENST00000502357 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
LMNA-218ENST00000502357 ARMC5Q96C12 935 aa16.29■□□□□ 0.2
LMNA-218ENST00000502357 PRMT6Q96LA8 375 aaPredicted RBP16.29■□□□□ 0.2
LMNA-218ENST00000502357 ANKRD2Q9GZV1 360 aa16.29■□□□□ 0.2
LMNA-218ENST00000502357 PRKRIP1Q9H875 184 aaPredicted RBP16.29■□□□□ 0.2
LMNA-218ENST00000502357 TRIM17Q9Y577 477 aa16.29■□□□□ 0.2
LMNA-218ENST00000502357 IL1R1P14778 569 aa16.28■□□□□ 0.2
LMNA-218ENST00000502357 IGHMBP2P38935 993 aaKnown RBP16.28■□□□□ 0.2
LMNA-218ENST00000502357 CALD1Q05682 793 aaKnown RBP16.28■□□□□ 0.2
LMNA-218ENST00000502357 NBPF12Q5TAG4 269 aaPredicted RBP16.28■□□□□ 0.2
LMNA-218ENST00000502357 TSR2Q969E8 191 aaKnown RBP16.28■□□□□ 0.2
LMNA-218ENST00000502357 SLC10A4Q96EP9 437 aa16.28■□□□□ 0.2
LMNA-218ENST00000502357 PPP2R3BQ9Y5P8 575 aa16.28■□□□□ 0.2
LMNA-218ENST00000502357 SPDYE2BA6NHP3 402 aa16.27■□□□□ 0.2
LMNA-218ENST00000502357 SPDYE6P0CI01 402 aa16.27■□□□□ 0.2
LMNA-218ENST00000502357 FKBP1AP62942 108 aaKnown RBP16.27■□□□□ 0.2
LMNA-218ENST00000502357 FOXO4P98177 505 aa16.27■□□□□ 0.2
LMNA-218ENST00000502357 CRHR2Q13324 411 aa16.27■□□□□ 0.2
LMNA-218ENST00000502357 DLGAP5Q15398 846 aa16.27■□□□□ 0.2
LMNA-218ENST00000502357 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
LMNA-218ENST00000502357 MS4A4AQ96JQ5 239 aa16.27■□□□□ 0.2
LMNA-218ENST00000502357 TAF5LO75529 589 aa16.26■□□□□ 0.19
LMNA-218ENST00000502357 CFAP100Q494V2 611 aa16.26■□□□□ 0.19
LMNA-218ENST00000502357 CD99L2Q8TCZ2 262 aa16.26■□□□□ 0.19
LMNA-218ENST00000502357 GCC1Q96CN9 775 aa16.26■□□□□ 0.19
LMNA-218ENST00000502357 CLRN2A0PK11 232 aa16.25■□□□□ 0.19
LMNA-218ENST00000502357 EN2P19622 333 aaPredicted RBP16.25■□□□□ 0.19
LMNA-218ENST00000502357 NEXNQ0ZGT2 675 aa16.25■□□□□ 0.19
LMNA-218ENST00000502357 HELBQ8NG08 1087 aaPredicted RBP16.25■□□□□ 0.19
LMNA-218ENST00000502357 TEPSINQ96N21 525 aa16.25■□□□□ 0.19
LMNA-218ENST00000502357 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
LMNA-218ENST00000502357 CDAN1Q8IWY9 1227 aa16.24■□□□□ 0.19
LMNA-218ENST00000502357 CHMP4AQ9BY43 222 aa16.24■□□□□ 0.19
LMNA-218ENST00000502357 PPP1R12BO60237 982 aaPredicted RBP16.23■□□□□ 0.19
LMNA-218ENST00000502357 FXR1P51114 621 aaKnown RBP eCLIP16.23■□□□□ 0.19
LMNA-218ENST00000502357 FLIIQ13045 1269 aa16.23■□□□□ 0.19
LMNA-218ENST00000502357 RASA3Q14644 834 aa16.23■□□□□ 0.19
LMNA-218ENST00000502357 CCDC27Q2M243 656 aa16.23■□□□□ 0.19
LMNA-218ENST00000502357 TWISTNBQ3B726 338 aaPredicted RBP16.23■□□□□ 0.19
LMNA-218ENST00000502357 LINS1Q8NG48 757 aa16.23■□□□□ 0.19
LMNA-218ENST00000502357 ERO1AQ96HE7 468 aa16.23■□□□□ 0.19
LMNA-218ENST00000502357 MPHOSPH8Q99549 860 aa16.23■□□□□ 0.19
LMNA-218ENST00000502357 CACNA1FO60840 1977 aa16.23■□□□□ 0.19
LMNA-218ENST00000502357 FAM205AQ6ZU69 1335 aa16.22■□□□□ 0.19
LMNA-218ENST00000502357 F8W031 263 aaPredicted RBP16.22■□□□□ 0.19
LMNA-218ENST00000502357 EPHA10Q5JZY3 1008 aa16.22■□□□□ 0.19
LMNA-218ENST00000502357 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.22■□□□□ 0.19
LMNA-218ENST00000502357 ANKRD13AQ8IZ07 590 aa16.22■□□□□ 0.19
LMNA-218ENST00000502357 DNAAF4Q8WXU2 420 aa16.22■□□□□ 0.19
LMNA-218ENST00000502357 ZNF333Q96JL9 665 aa16.22■□□□□ 0.19
LMNA-218ENST00000502357 SP3Q02447 781 aa16.21■□□□□ 0.19
LMNA-218ENST00000502357 SUPT20HL1Q3ZLR7 823 aa16.21■□□□□ 0.19
LMNA-218ENST00000502357 CCDC184Q52MB2 194 aa16.21■□□□□ 0.19
LMNA-218ENST00000502357 WWC1Q8IX03 1113 aa16.21■□□□□ 0.19
LMNA-218ENST00000502357 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
LMNA-218ENST00000502357 BRI3BPQ8WY22 251 aa16.21■□□□□ 0.19
LMNA-218ENST00000502357 STK31Q9BXU1 1019 aa16.21■□□□□ 0.19
LMNA-218ENST00000502357 JAG2Q9Y219 1238 aa16.21■□□□□ 0.19
LMNA-218ENST00000502357 ZSWIM8A7E2V4 1837 aa16.21■□□□□ 0.19
LMNA-218ENST00000502357 ARAP2Q8WZ64 1704 aa16.2■□□□□ 0.18
LMNA-218ENST00000502357 ANKRD18BA2A2Z9 1011 aa16.2■□□□□ 0.18
LMNA-218ENST00000502357 IREB2P48200 963 aaKnown RBP16.2■□□□□ 0.18
LMNA-218ENST00000502357 SPDYE2Q495Y8 402 aa16.2■□□□□ 0.18
LMNA-218ENST00000502357 BEND3Q5T5X7 828 aa16.2■□□□□ 0.18
LMNA-218ENST00000502357 TDRD7Q8NHU6 1098 aaKnown RBP16.2■□□□□ 0.18
LMNA-218ENST00000502357 OPTNQ96CV9 577 aa16.2■□□□□ 0.18
LMNA-218ENST00000502357 EFCC1Q9HA90 598 aa16.2■□□□□ 0.18
LMNA-218ENST00000502357 ZNF70Q9UC06 446 aaPredicted RBP16.2■□□□□ 0.18
LMNA-218ENST00000502357 VAMP4O75379 141 aa16.19■□□□□ 0.18
LMNA-218ENST00000502357 ZNF594Q96JF6 807 aaPredicted RBP16.19■□□□□ 0.18
LMNA-218ENST00000502357 ELP3Q9H9T3 547 aa16.19■□□□□ 0.18
LMNA-218ENST00000502357 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.19■□□□□ 0.18
LMNA-218ENST00000502357 KCNJ4P48050 445 aa16.18■□□□□ 0.18
LMNA-218ENST00000502357 GRIK5Q16478 980 aa16.18■□□□□ 0.18
LMNA-218ENST00000502357 FAM43AQ8N2R8 423 aa16.18■□□□□ 0.18
LMNA-218ENST00000502357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.18■□□□□ 0.18
LMNA-218ENST00000502357 MYH16Q9H6N6 1097 aa16.18■□□□□ 0.18
LMNA-218ENST00000502357 TDRD3Q9H7E2 651 aaKnown RBP16.18■□□□□ 0.18
LMNA-218ENST00000502357 VEZTQ9HBM0 779 aa16.18■□□□□ 0.18
LMNA-218ENST00000502357 IL16Q14005 1332 aa16.18■□□□□ 0.18
LMNA-218ENST00000502357 IFIT5Q13325 482 aaKnown RBP16.17■□□□□ 0.18
LMNA-218ENST00000502357 OTUD7BQ6GQQ9 843 aa16.17■□□□□ 0.18
LMNA-218ENST00000502357 ZNF804AQ7Z570 1209 aa16.17■□□□□ 0.18
LMNA-218ENST00000502357 SERPINA10Q9UK55 444 aa16.17■□□□□ 0.18
LMNA-218ENST00000502357 COLQQ9Y215 455 aaPredicted RBP16.17■□□□□ 0.18
LMNA-218ENST00000502357 PTCH2Q9Y6C5 1203 aa16.17■□□□□ 0.18
LMNA-218ENST00000502357 SZT2Q5T011 3432 aa16.17■□□□□ 0.18
LMNA-218ENST00000502357 MYO1BO43795 1136 aa16.16■□□□□ 0.18
LMNA-218ENST00000502357 FKBP5Q13451 457 aaPredicted RBP16.16■□□□□ 0.18
LMNA-218ENST00000502357 VGLL4Q14135 290 aa16.16■□□□□ 0.18
LMNA-218ENST00000502357 LMBR1LQ6UX01 489 aa16.16■□□□□ 0.18
LMNA-218ENST00000502357 OTUD5Q96G74 571 aa16.16■□□□□ 0.18
LMNA-218ENST00000502357 KAZALD1Q96I82 304 aa16.16■□□□□ 0.18
LMNA-218ENST00000502357 FAM84BQ96KN1 310 aaPredicted RBP16.16■□□□□ 0.18
LMNA-218ENST00000502357 F6X3S4 739 aa16.15■□□□□ 0.18
LMNA-218ENST00000502357 NCBP3Q53F19 620 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms