RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 IGKV5-2P06315 115 aa11.74□□□□□ -0.53
CCDC171-209ENST00000498725 GJA5P36382 358 aa11.74□□□□□ -0.53
CCDC171-209ENST00000498725 FXR1P51114 621 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC171-209ENST00000498725 RBM5P52756 815 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC171-209ENST00000498725 CAP1Q01518 475 aa11.74□□□□□ -0.53
CCDC171-209ENST00000498725 RALBP1Q15311 655 aa11.74□□□□□ -0.53
CCDC171-209ENST00000498725 NBPF12Q5TAG4 269 aaPredicted RBP11.74□□□□□ -0.53
CCDC171-209ENST00000498725 UBE3BQ7Z3V4 1068 aa11.74□□□□□ -0.53
CCDC171-209ENST00000498725 TMEM106CQ9BVX2 250 aa11.74□□□□□ -0.53
CCDC171-209ENST00000498725 ADAMTS8Q9UP79 889 aa11.74□□□□□ -0.53
CCDC171-209ENST00000498725 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
CCDC171-209ENST00000498725 JAG2Q9Y219 1238 aa11.74□□□□□ -0.53
CCDC171-209ENST00000498725 LEMD3Q9Y2U8 911 aa11.74□□□□□ -0.53
CCDC171-209ENST00000498725 PI4KAP2A4QPH2 592 aa11.73□□□□□ -0.53
CCDC171-209ENST00000498725 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
CCDC171-209ENST00000498725 COL1A1P02452 1464 aaPredicted RBP11.73□□□□□ -0.53
CCDC171-209ENST00000498725 ZBTB48P10074 688 aaPredicted RBP11.73□□□□□ -0.53
CCDC171-209ENST00000498725 SP3Q02447 781 aa11.73□□□□□ -0.53
CCDC171-209ENST00000498725 NEXNQ0ZGT2 675 aa11.73□□□□□ -0.53
CCDC171-209ENST00000498725 OTUD7BQ6GQQ9 843 aa11.73□□□□□ -0.53
CCDC171-209ENST00000498725 CERS5Q8N5B7 392 aa11.73□□□□□ -0.53
CCDC171-209ENST00000498725 PI4KAP1Q8N8J0 262 aa11.73□□□□□ -0.53
CCDC171-209ENST00000498725 HELBQ8NG08 1087 aaPredicted RBP11.73□□□□□ -0.53
CCDC171-209ENST00000498725 ZBED3Q96IU2 234 aaPredicted RBP11.73□□□□□ -0.53
CCDC171-209ENST00000498725 MPHOSPH8Q99549 860 aa11.73□□□□□ -0.53
CCDC171-209ENST00000498725 ELP3Q9H9T3 547 aa11.73□□□□□ -0.53
CCDC171-209ENST00000498725 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
CCDC171-209ENST00000498725 AOX1Q06278 1338 aa11.72□□□□□ -0.53
CCDC171-209ENST00000498725 MYBBP1AQ9BQG0 1328 aaKnown RBP11.72□□□□□ -0.53
CCDC171-209ENST00000498725 TAF5LO75529 589 aa11.72□□□□□ -0.53
CCDC171-209ENST00000498725 ITGA6P23229 1130 aa11.72□□□□□ -0.53
CCDC171-209ENST00000498725 GNAI1P63096 354 aa11.72□□□□□ -0.53
CCDC171-209ENST00000498725 SLC4A8Q2Y0W8 1093 aa11.72□□□□□ -0.53
CCDC171-209ENST00000498725 CFAP100Q494V2 611 aa11.72□□□□□ -0.53
CCDC171-209ENST00000498725 CCDC30Q5VVM6 783 aa11.72□□□□□ -0.53
CCDC171-209ENST00000498725 ANKRD2Q9GZV1 360 aa11.72□□□□□ -0.53
CCDC171-209ENST00000498725 CD209Q9NNX6 404 aa11.72□□□□□ -0.53
CCDC171-209ENST00000498725 HTTP42858 3142 aa11.72□□□□□ -0.53
CCDC171-209ENST00000498725 MYO1BO43795 1136 aa11.71□□□□□ -0.53
CCDC171-209ENST00000498725 USP2O75604 605 aaPredicted RBP11.71□□□□□ -0.53
CCDC171-209ENST00000498725 ZNF853P0CG23 659 aa11.71□□□□□ -0.53
CCDC171-209ENST00000498725 IREB2P48200 963 aaKnown RBP11.71□□□□□ -0.53
CCDC171-209ENST00000498725 CHRNDQ07001 517 aa11.71□□□□□ -0.53
CCDC171-209ENST00000498725 MAP3K11Q16584 847 aa11.71□□□□□ -0.53
CCDC171-209ENST00000498725 SUPT20HL1Q3ZLR7 823 aa11.71□□□□□ -0.53
CCDC171-209ENST00000498725 SLC9C1Q4G0N8 1177 aa11.71□□□□□ -0.53
CCDC171-209ENST00000498725 KSR2Q6VAB6 950 aa11.71□□□□□ -0.53
CCDC171-209ENST00000498725 TSPYL6Q8N831 410 aa11.71□□□□□ -0.53
CCDC171-209ENST00000498725 PRMT6Q96LA8 375 aaPredicted RBP11.71□□□□□ -0.53
CCDC171-209ENST00000498725 PTPN18Q99952 460 aa11.71□□□□□ -0.53
CCDC171-209ENST00000498725 IFT57Q9NWB7 429 aa11.71□□□□□ -0.53
CCDC171-209ENST00000498725 PTCH2Q9Y6C5 1203 aa11.71□□□□□ -0.53
CCDC171-209ENST00000498725 CENPFP49454 3210 aa11.71□□□□□ -0.54
CCDC171-209ENST00000498725 MKI67P46013 3256 aaKnown RBP11.7□□□□□ -0.54
CCDC171-209ENST00000498725 NEURL1BA8MQ27 555 aa11.7□□□□□ -0.54
CCDC171-209ENST00000498725 APAF1O14727 1248 aa11.7□□□□□ -0.54
CCDC171-209ENST00000498725 PLIN1O60240 522 aa11.7□□□□□ -0.54
CCDC171-209ENST00000498725 G2E3Q7L622 706 aa11.7□□□□□ -0.54
CCDC171-209ENST00000498725 ANKRD13AQ8IZ07 590 aa11.7□□□□□ -0.54
CCDC171-209ENST00000498725 ARMC5Q96C12 935 aa11.7□□□□□ -0.54
CCDC171-209ENST00000498725 OPTNQ96CV9 577 aa11.7□□□□□ -0.54
CCDC171-209ENST00000498725 CHMP3Q9Y3E7 222 aa11.7□□□□□ -0.54
CCDC171-209ENST00000498725 KIAA0100Q14667 2235 aaKnown RBP11.7□□□□□ -0.54
CCDC171-209ENST00000498725 SPDYE2BA6NHP3 402 aa11.69□□□□□ -0.54
CCDC171-209ENST00000498725 SPDYE6P0CI01 402 aa11.69□□□□□ -0.54
CCDC171-209ENST00000498725 MMP14P50281 582 aa11.69□□□□□ -0.54
CCDC171-209ENST00000498725 DDX10Q13206 875 aaKnown RBP11.69□□□□□ -0.54
CCDC171-209ENST00000498725 RASA3Q14644 834 aa11.69□□□□□ -0.54
CCDC171-209ENST00000498725 TAF1CQ15572 869 aaPredicted RBP11.69□□□□□ -0.54
CCDC171-209ENST00000498725 SH3TC2Q8TF17 1288 aa11.69□□□□□ -0.54
CCDC171-209ENST00000498725 ZNF333Q96JL9 665 aa11.69□□□□□ -0.54
CCDC171-209ENST00000498725 STK31Q9BXU1 1019 aa11.69□□□□□ -0.54
CCDC171-209ENST00000498725 PPP2R3BQ9Y5P8 575 aa11.69□□□□□ -0.54
CCDC171-209ENST00000498725 ARAP2Q8WZ64 1704 aa11.69□□□□□ -0.54
CCDC171-209ENST00000498725 CCL15-CCL14A0A0B4J2E2 113 aa11.68□□□□□ -0.54
CCDC171-209ENST00000498725 H0YGN5 161 aa11.68□□□□□ -0.54
CCDC171-209ENST00000498725 H7C1W4 665 aa11.68□□□□□ -0.54
CCDC171-209ENST00000498725 CCL15Q16663 113 aa11.68□□□□□ -0.54
CCDC171-209ENST00000498725 ZNF804AQ7Z570 1209 aa11.68□□□□□ -0.54
CCDC171-209ENST00000498725 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
CCDC171-209ENST00000498725 CDAN1Q8IWY9 1227 aa11.68□□□□□ -0.54
CCDC171-209ENST00000498725 MTMR14Q8NCE2 650 aa11.68□□□□□ -0.54
CCDC171-209ENST00000498725 TSR2Q969E8 191 aaKnown RBP11.68□□□□□ -0.54
CCDC171-209ENST00000498725 ANKRD18BA2A2Z9 1011 aa11.67□□□□□ -0.54
CCDC171-209ENST00000498725 TCP10L2B9ZVM9 353 aa11.67□□□□□ -0.54
CCDC171-209ENST00000498725 CALD1Q05682 793 aaKnown RBP11.67□□□□□ -0.54
CCDC171-209ENST00000498725 BRI3BPQ8WY22 251 aa11.67□□□□□ -0.54
CCDC171-209ENST00000498725 OTUD5Q96G74 571 aa11.67□□□□□ -0.54
CCDC171-209ENST00000498725 ARHGAP39Q9C0H5 1083 aa11.67□□□□□ -0.54
CCDC171-209ENST00000498725 TDRD3Q9H7E2 651 aaKnown RBP11.67□□□□□ -0.54
CCDC171-209ENST00000498725 ZFYVE28Q9HCC9 887 aa11.67□□□□□ -0.54
CCDC171-209ENST00000498725 GCKRQ14397 625 aa11.66□□□□□ -0.54
CCDC171-209ENST00000498725 FAM43AQ8N2R8 423 aa11.66□□□□□ -0.54
CCDC171-209ENST00000498725 MS4A4AQ96JQ5 239 aa11.66□□□□□ -0.54
CCDC171-209ENST00000498725 ZNF70Q9UC06 446 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-209ENST00000498725 IRS2Q9Y4H2 1338 aa11.65□□□□□ -0.54
CCDC171-209ENST00000498725 TESPA1A2RU30 521 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-209ENST00000498725 VGLL4Q14135 290 aa11.65□□□□□ -0.54
CCDC171-209ENST00000498725 ARHGEF6Q15052 776 aa11.65□□□□□ -0.54
CCDC171-209ENST00000498725 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms