RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ITPRIPQ8IWB1 547 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.81□□□□□ -1.64
CLTC-209ENST00000498711 ERBB4Q15303 1308 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 KIAA0232Q92628 1395 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 N4BP2Q86UW6 1770 aaPredicted RBP4.81□□□□□ -1.64
CLTC-209ENST00000498711 MAP2P11137 1827 aaKnown RBP4.81□□□□□ -1.64
CLTC-209ENST00000498711 PRPF40AO75400 957 aaKnown RBP4.81□□□□□ -1.64
CLTC-209ENST00000498711 CD2BP2O95400 341 aaKnown RBP4.81□□□□□ -1.64
CLTC-209ENST00000498711 SCNN1DP51172 638 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 GDF10P55107 478 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 GNAI1P63096 354 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 ERVK-9P63128 1117 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 KLHL40Q2TBA0 621 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 NYAP1Q6ZVC0 841 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 TNS4Q8IZW8 715 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 GBP4Q96PP9 640 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 USP26Q9BXU7 913 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 PRKD2Q9BZL6 878 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 OSBPL3Q9H4L5 887 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 PLCH1Q4KWH8 1693 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 RRP9O43818 475 aaKnown RBP4.8□□□□□ -1.64
CLTC-209ENST00000498711 LDHBP07195 334 aaKnown RBP4.8□□□□□ -1.64
CLTC-209ENST00000498711 MMRN1Q13201 1228 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 ALKBH2Q6NS38 261 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 PDLIM2Q96JY6 352 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 MTRQ99707 1265 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 KRTAP3-3Q9BYR6 98 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 METP08581 1390 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 PHRF1Q9P1Y6 1649 aaKnown RBP4.8□□□□□ -1.64
CLTC-209ENST00000498711 ERVH48-1M5A8F1 160 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 CDC45O75419 566 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 TPM2P07951 284 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 GSPT1P15170 499 aaKnown RBP4.8□□□□□ -1.64
CLTC-209ENST00000498711 TNNT2P45379 298 aaPredicted RBP4.8□□□□□ -1.64
CLTC-209ENST00000498711 MAPK8P45983 427 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 EPHA4P54764 986 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 SH3BP2P78314 561 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 CCDC173Q0VFZ6 552 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 DSC3Q14574 896 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 RABEP1Q15276 862 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 CC2D2BQ6DHV5 1058 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 ANKRD44Q8N8A2 993 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 PIK3R5Q8WYR1 880 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 SPATA32Q96LK8 384 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 CDK19Q9BWU1 502 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 API5Q9BZZ5 524 aaKnown RBP4.8□□□□□ -1.64
CLTC-209ENST00000498711 TSPAN10Q9H1Z9 355 aaPredicted RBP4.8□□□□□ -1.64
CLTC-209ENST00000498711 GGNBP2Q9H3C7 697 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 CWC22Q9HCG8 908 aaKnown RBP4.8□□□□□ -1.64
CLTC-209ENST00000498711 FCF1Q9Y324 198 aaKnown RBP4.8□□□□□ -1.64
CLTC-209ENST00000498711 MAP4K5Q9Y4K4 846 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 WNK3Q9BYP7 1800 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 LRP6O75581 1613 aa4.8□□□□□ -1.64
CLTC-209ENST00000498711 EPB41L2O43491 1005 aaKnown RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 SMARCA5O60264 1052 aaPredicted RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 HSPA1LP34931 641 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 PLCB3Q01970 1234 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 EHHADHQ08426 723 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 INTS6LQ5JSJ4 861 aaKnown RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 LDLRAD1Q5T700 205 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 TTC22Q5TAA0 569 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 HDGFL2Q7Z4V5 671 aaPredicted RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 TMEM87AQ8NBN3 555 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 LMBRD1Q9NUN5 540 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 PARP2Q9UGN5 583 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 SOS2Q07890 1332 aaPredicted RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 SALL3Q9BXA9 1300 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 RTL1A6NKG5 1358 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 BAG4O95429 457 aaKnown RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 EIF1AXP47813 144 aaKnown RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 C9orf131Q5VYM1 1079 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 ANKRD13DQ6ZTN6 518 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 TMC4Q7Z404 712 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 RPAP2Q8IXW5 612 aaPredicted RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 TSPYL6Q8N831 410 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 PHACTR3Q96KR7 559 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 CHMP4AQ9BY43 222 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 SAP130Q9H0E3 1048 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 MBIPQ9NS73 344 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 LRRC37A3O60309 1634 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 ZNF500O60304 480 aaPredicted RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 FZD6O60353 706 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 SORBS3O60504 671 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 OFD1O75665 1012 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 INHAP05111 366 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 NUCB2P80303 420 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 ATP2B2Q01814 1243 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 RAD51AP2Q09MP3 1159 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 LMOD3Q0VAK6 560 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 THSD4Q6ZMP0 1018 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 VASH1Q7L8A9 365 aaPredicted RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 ALKBH8Q96BT7 664 aaKnown RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 FAM161BQ96MY7 647 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 PRAM1Q96QH2 718 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 FAM129BQ96TA1 746 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 DUSP9Q99956 384 aaKnown RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 LNPKQ9C0E8 428 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 METTL5Q9NRN9 209 aaKnown RBP4.79□□□□□ -1.64
CLTC-209ENST00000498711 STIM2Q9P246 746 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms