RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 TNIP1Q15025 636 aa7.34□□□□□ -1.23
FXN-205ENST00000498653 ARHGEF6Q15052 776 aa7.34□□□□□ -1.23
FXN-205ENST00000498653 RBM26Q5T8P6 1007 aaKnown RBP7.34□□□□□ -1.23
FXN-205ENST00000498653 PPM1EQ8WY54 764 aa7.34□□□□□ -1.23
FXN-205ENST00000498653 PTPN18Q99952 460 aa7.34□□□□□ -1.23
FXN-205ENST00000498653 NAV2Q8IVL1 2488 aa7.34□□□□□ -1.24
FXN-205ENST00000498653 DDX60Q8IY21 1712 aaKnown RBP7.33□□□□□ -1.24
FXN-205ENST00000498653 PTPRZ1P23471 2315 aaPredicted RBP7.33□□□□□ -1.24
FXN-205ENST00000498653 GRK4P32298 578 aa7.33□□□□□ -1.24
FXN-205ENST00000498653 KCNQ1P51787 676 aa7.33□□□□□ -1.24
FXN-205ENST00000498653 SMAD3P84022 425 aaKnown RBP7.33□□□□□ -1.24
FXN-205ENST00000498653 TCIRG1Q13488 830 aa7.33□□□□□ -1.24
FXN-205ENST00000498653 HSP90AB2PQ58FF8 381 aa7.33□□□□□ -1.24
FXN-205ENST00000498653 ANGEL2Q5VTE6 544 aaKnown RBP7.33□□□□□ -1.24
FXN-205ENST00000498653 PRAMEF18Q5VWM3 479 aa7.33□□□□□ -1.24
FXN-205ENST00000498653 NECAB2Q7Z6G3 386 aa7.33□□□□□ -1.24
FXN-205ENST00000498653 DCAF11Q8TEB1 546 aa7.33□□□□□ -1.24
FXN-205ENST00000498653 SETDB2Q96T68 719 aa7.33□□□□□ -1.24
FXN-205ENST00000498653 VPS33BQ9H267 617 aa7.33□□□□□ -1.24
FXN-205ENST00000498653 SCAF8Q9UPN6 1271 aaKnown RBP7.33□□□□□ -1.24
FXN-205ENST00000498653 WASHC2AQ641Q2 1341 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 RIMBP2O15034 1052 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 GFRA3O60609 400 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 ZBTB48P10074 688 aaPredicted RBP7.32□□□□□ -1.24
FXN-205ENST00000498653 CTGFP29279 349 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 PRMT2P55345 433 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 LACTBP83111 547 aaPredicted RBP7.32□□□□□ -1.24
FXN-205ENST00000498653 CRY2Q49AN0 593 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 GRIPAP1Q4V328 841 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 AKNAD1Q5T1N1 836 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 LDLRAD1Q5T700 205 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 ANKS1AQ92625 1134 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 CXXC1Q9P0U4 656 aaPredicted RBP7.32□□□□□ -1.24
FXN-205ENST00000498653 RIPOR2Q9Y4F9 1068 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 ASPMQ8IZT6 3477 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 PLXNA3P51805 1871 aa7.32□□□□□ -1.24
FXN-205ENST00000498653 SCN9AQ15858 1988 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 OTOFQ9HC10 1997 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 GCN1Q92616 2671 aaKnown RBP7.31□□□□□ -1.24
FXN-205ENST00000498653 PSMD14O00487 310 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 CAMTA2O94983 1202 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 CABP4P57796 275 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 TFF2Q03403 129 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 KIAA2012Q0VF49 1180 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 CAMK2BQ13554 666 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 TTLL12Q14166 644 aaPredicted RBP7.31□□□□□ -1.24
FXN-205ENST00000498653 DOK7Q18PE1 504 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 WNK4Q96J92 1243 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 MPHOSPH9Q99550 1183 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 RTFDC1Q9BY42 306 aaPredicted RBP7.31□□□□□ -1.24
FXN-205ENST00000498653 FLT4P35916 1363 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 ABCC12Q96J65 1359 aa7.31□□□□□ -1.24
FXN-205ENST00000498653 VPS13AQ96RL7 3174 aa7.3□□□□□ -1.24
FXN-205ENST00000498653 TRIOO75962 3097 aa7.3□□□□□ -1.24
FXN-205ENST00000498653 FAM186AA6NE01 2351 aa7.3□□□□□ -1.24
FXN-205ENST00000498653 TESPA1A2RU30 521 aaPredicted RBP7.3□□□□□ -1.24
FXN-205ENST00000498653 ZNF316A6NFI3 1004 aaPredicted RBP7.3□□□□□ -1.24
FXN-205ENST00000498653 TBC1D12O60347 775 aa7.3□□□□□ -1.24
FXN-205ENST00000498653 CANXP27824 592 aaKnown RBP7.3□□□□□ -1.24
FXN-205ENST00000498653 GJA5P36382 358 aa7.3□□□□□ -1.24
FXN-205ENST00000498653 NBR1Q14596 966 aa7.3□□□□□ -1.24
FXN-205ENST00000498653 NBPF5PQ86XG9 351 aaPredicted RBP7.3□□□□□ -1.24
FXN-205ENST00000498653 TBC1D2BQ9UPU7 963 aa7.3□□□□□ -1.24
FXN-205ENST00000498653 RIF1Q5UIP0 2472 aaKnown RBP7.29□□□□□ -1.24
FXN-205ENST00000498653 GVINP1Q7Z2Y8 2422 aa7.29□□□□□ -1.24
FXN-205ENST00000498653 A0A087WZG4 1122 aa7.29□□□□□ -1.24
FXN-205ENST00000498653 GNRH1P01148 92 aa7.29□□□□□ -1.24
FXN-205ENST00000498653 TFRCP02786 760 aaKnown RBP7.29□□□□□ -1.24
FXN-205ENST00000498653 UBXN2AP68543 259 aa7.29□□□□□ -1.24
FXN-205ENST00000498653 C9orf50Q5SZB4 431 aa7.29□□□□□ -1.24
FXN-205ENST00000498653 KCNV2Q8TDN2 545 aa7.29□□□□□ -1.24
FXN-205ENST00000498653 DEFB118Q96PH6 123 aa7.29□□□□□ -1.24
FXN-205ENST00000498653 UIMC1Q96RL1 719 aa7.29□□□□□ -1.24
FXN-205ENST00000498653 PAK6Q9NQU5 681 aaPredicted RBP7.29□□□□□ -1.24
FXN-205ENST00000498653 SRRDQ9UH36 339 aa7.29□□□□□ -1.24
FXN-205ENST00000498653 RTL9Q8NET4 1388 aa7.29□□□□□ -1.24
FXN-205ENST00000498653 CACNA1HO95180 2353 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 PFASO15067 1338 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 ADGRA2Q96PE1 1338 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 CAPN2P17655 700 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 RPS12P25398 132 aaKnown RBP7.28□□□□□ -1.24
FXN-205ENST00000498653 ID4P47928 161 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 SCARF1Q14162 830 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 SHHQ15465 462 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 OTUD7BQ6GQQ9 843 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 ZNF710Q8N1W2 664 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 NFATC2IPQ8NCF5 419 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 PRSS33Q8NF86 280 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 CLMNQ96JQ2 1002 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 CD320Q9NPF0 282 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 FZD1Q9UP38 647 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 PSME4Q14997 1843 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 MGAMO43451 1857 aa7.28□□□□□ -1.24
FXN-205ENST00000498653 OSBPP22059 807 aa7.27□□□□□ -1.25
FXN-205ENST00000498653 HOXA10P31260 410 aaPredicted RBP7.27□□□□□ -1.25
FXN-205ENST00000498653 MAP3K9P80192 1104 aa7.27□□□□□ -1.25
FXN-205ENST00000498653 CCDC85BQ15834 202 aaPredicted RBP7.27□□□□□ -1.25
FXN-205ENST00000498653 COG3Q96JB2 828 aa7.27□□□□□ -1.25
FXN-205ENST00000498653 TRIM47Q96LD4 638 aa7.27□□□□□ -1.25
FXN-205ENST00000498653 COL4A6Q14031 1691 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms