RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 CTU1Q7Z7A3 348 aaKnown RBP15.27■□□□□ 0.04
CNOT4-211ENST00000498534 HELBQ8NG08 1087 aaPredicted RBP15.27■□□□□ 0.04
CNOT4-211ENST00000498534 F6X3S4 739 aa15.26■□□□□ 0.03
CNOT4-211ENST00000498534 TM4SF4P48230 202 aa15.26■□□□□ 0.03
CNOT4-211ENST00000498534 PRKG1Q13976 671 aa15.26■□□□□ 0.03
CNOT4-211ENST00000498534 BEND3Q5T5X7 828 aa15.26■□□□□ 0.03
CNOT4-211ENST00000498534 LMBR1LQ6UX01 489 aa15.26■□□□□ 0.03
CNOT4-211ENST00000498534 C15orf52Q6ZUT6 534 aaKnown RBP15.26■□□□□ 0.03
CNOT4-211ENST00000498534 ZNF804AQ7Z570 1209 aa15.26■□□□□ 0.03
CNOT4-211ENST00000498534 C9orf78Q9NZ63 289 aaPredicted RBP15.26■□□□□ 0.03
CNOT4-211ENST00000498534 MYO1BO43795 1136 aa15.25■□□□□ 0.03
CNOT4-211ENST00000498534 PLIN1O60240 522 aa15.25■□□□□ 0.03
CNOT4-211ENST00000498534 TBC1D8O95759 1140 aa15.25■□□□□ 0.03
CNOT4-211ENST00000498534 PTPN12Q05209 780 aaKnown RBP15.25■□□□□ 0.03
CNOT4-211ENST00000498534 SREBF2Q12772 1141 aa15.25■□□□□ 0.03
CNOT4-211ENST00000498534 PKN2Q16513 984 aaKnown RBP15.25■□□□□ 0.03
CNOT4-211ENST00000498534 LDHAL6AQ6ZMR3 332 aa15.25■□□□□ 0.03
CNOT4-211ENST00000498534 DEFB129Q9H1M3 183 aa15.25■□□□□ 0.03
CNOT4-211ENST00000498534 CNNM1Q9NRU3 951 aa15.25■□□□□ 0.03
CNOT4-211ENST00000498534 SNAP23O00161 211 aa15.24■□□□□ 0.03
CNOT4-211ENST00000498534 GRM8O00222 908 aa15.24■□□□□ 0.03
CNOT4-211ENST00000498534 ZEB1P37275 1124 aaPredicted RBP15.24■□□□□ 0.03
CNOT4-211ENST00000498534 MKRN3Q13064 507 aaKnown RBP15.24■□□□□ 0.03
CNOT4-211ENST00000498534 MTMR14Q8NCE2 650 aa15.24■□□□□ 0.03
CNOT4-211ENST00000498534 SLC10A4Q96EP9 437 aa15.24■□□□□ 0.03
CNOT4-211ENST00000498534 ZBED3Q96IU2 234 aaPredicted RBP15.24■□□□□ 0.03
CNOT4-211ENST00000498534 ANGEL1Q9UNK9 670 aaKnown RBP15.24■□□□□ 0.03
CNOT4-211ENST00000498534 PPP1R12BO60237 982 aaPredicted RBP15.23■□□□□ 0.03
CNOT4-211ENST00000498534 IL1R1P14778 569 aa15.23■□□□□ 0.03
CNOT4-211ENST00000498534 FKBP1AP62942 108 aaKnown RBP15.23■□□□□ 0.03
CNOT4-211ENST00000498534 SUPT20HL1Q3ZLR7 823 aa15.23■□□□□ 0.03
CNOT4-211ENST00000498534 LDLRAD1Q5T700 205 aa15.23■□□□□ 0.03
CNOT4-211ENST00000498534 F8W031 263 aaPredicted RBP15.22■□□□□ 0.03
CNOT4-211ENST00000498534 ALDH1L1O75891 902 aa15.22■□□□□ 0.03
CNOT4-211ENST00000498534 RBM5P52756 815 aaKnown RBP eCLIP15.22■□□□□ 0.03
CNOT4-211ENST00000498534 INHBEP58166 350 aa15.22■□□□□ 0.03
CNOT4-211ENST00000498534 CFAP100Q494V2 611 aa15.22■□□□□ 0.03
CNOT4-211ENST00000498534 SLC4A10Q6U841 1118 aa15.22■□□□□ 0.03
CNOT4-211ENST00000498534 CERS5Q8N5B7 392 aa15.22■□□□□ 0.03
CNOT4-211ENST00000498534 ZNF296Q8WUU4 475 aaPredicted RBP15.22■□□□□ 0.03
CNOT4-211ENST00000498534 ZNF594Q96JF6 807 aaPredicted RBP15.22■□□□□ 0.03
CNOT4-211ENST00000498534 PPP2R3BQ9Y5P8 575 aa15.22■□□□□ 0.03
CNOT4-211ENST00000498534 IRS2Q9Y4H2 1338 aa15.21■□□□□ 0.03
CNOT4-211ENST00000498534 ZNF316A6NFI3 1004 aaPredicted RBP15.21■□□□□ 0.03
CNOT4-211ENST00000498534 GPR25O00155 361 aa15.21■□□□□ 0.03
CNOT4-211ENST00000498534 ALDH1A1P00352 501 aa15.21■□□□□ 0.03
CNOT4-211ENST00000498534 NOM1Q5C9Z4 860 aaKnown RBP15.21■□□□□ 0.03
CNOT4-211ENST00000498534 EPHA10Q5JZY3 1008 aa15.21■□□□□ 0.03
CNOT4-211ENST00000498534 SPRYD7Q5W111 196 aa15.21■□□□□ 0.03
CNOT4-211ENST00000498534 FAM9BQ8IZU0 186 aa15.21■□□□□ 0.03
CNOT4-211ENST00000498534 SRCIN1Q9C0H9 1055 aa15.21■□□□□ 0.03
CNOT4-211ENST00000498534 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.21■□□□□ 0.03
CNOT4-211ENST00000498534 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
CNOT4-211ENST00000498534 UNCXA6NJT0 531 aa15.2■□□□□ 0.02
CNOT4-211ENST00000498534 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
CNOT4-211ENST00000498534 SOX10P56693 466 aa15.2■□□□□ 0.02
CNOT4-211ENST00000498534 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
CNOT4-211ENST00000498534 PRMT6Q96LA8 375 aaPredicted RBP15.2■□□□□ 0.02
CNOT4-211ENST00000498534 VEZTQ9HBM0 779 aa15.2■□□□□ 0.02
CNOT4-211ENST00000498534 COL1A1P02452 1464 aaPredicted RBP15.2■□□□□ 0.02
CNOT4-211ENST00000498534 CLRN2A0PK11 232 aa15.19■□□□□ 0.02
CNOT4-211ENST00000498534 MANSC4A6NHS7 340 aaPredicted RBP15.19■□□□□ 0.02
CNOT4-211ENST00000498534 FKTNO75072 461 aa15.19■□□□□ 0.02
CNOT4-211ENST00000498534 HIBADHP31937 336 aaKnown RBP15.19■□□□□ 0.02
CNOT4-211ENST00000498534 UBE4AQ14139 1066 aa15.19■□□□□ 0.02
CNOT4-211ENST00000498534 HPS5Q9UPZ3 1129 aa15.19■□□□□ 0.02
CNOT4-211ENST00000498534 JAG2Q9Y219 1238 aa15.19■□□□□ 0.02
CNOT4-211ENST00000498534 ZNF646O15015 1829 aaPredicted RBP15.19■□□□□ 0.02
CNOT4-211ENST00000498534 ZBTB48P10074 688 aaPredicted RBP15.18■□□□□ 0.02
CNOT4-211ENST00000498534 MAP3K11Q16584 847 aa15.18■□□□□ 0.02
CNOT4-211ENST00000498534 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
CNOT4-211ENST00000498534 CFHR5Q9BXR6 569 aa15.18■□□□□ 0.02
CNOT4-211ENST00000498534 FAM205AQ6ZU69 1335 aa15.17■□□□□ 0.02
CNOT4-211ENST00000498534 IREB2P48200 963 aaKnown RBP15.17■□□□□ 0.02
CNOT4-211ENST00000498534 TNFAIP1Q13829 316 aa15.17■□□□□ 0.02
CNOT4-211ENST00000498534 RASA3Q14644 834 aa15.17■□□□□ 0.02
CNOT4-211ENST00000498534 MFSD14BQ5SR56 506 aa15.17■□□□□ 0.02
CNOT4-211ENST00000498534 VPS37DQ86XT2 251 aa15.17■□□□□ 0.02
CNOT4-211ENST00000498534 TDRD7Q8NHU6 1098 aaKnown RBP15.17■□□□□ 0.02
CNOT4-211ENST00000498534 TTF2Q9UNY4 1162 aaKnown RBP15.17■□□□□ 0.02
CNOT4-211ENST00000498534 FZD1Q9UP38 647 aa15.17■□□□□ 0.02
CNOT4-211ENST00000498534 PCDHAC2Q9Y5I4 1007 aa15.17■□□□□ 0.02
CNOT4-211ENST00000498534 GYG1P46976 350 aa15.16■□□□□ 0.02
CNOT4-211ENST00000498534 NBPF12Q5TAG4 269 aaPredicted RBP15.16■□□□□ 0.02
CNOT4-211ENST00000498534 OTUD7BQ6GQQ9 843 aa15.16■□□□□ 0.02
CNOT4-211ENST00000498534 FBXO46Q6PJ61 603 aaPredicted RBP15.16■□□□□ 0.02
CNOT4-211ENST00000498534 IFNL1Q8IU54 200 aa15.16■□□□□ 0.02
CNOT4-211ENST00000498534 FAM84BQ96KN1 310 aaPredicted RBP15.16■□□□□ 0.02
CNOT4-211ENST00000498534 SERPINA10Q9UK55 444 aa15.16■□□□□ 0.02
CNOT4-211ENST00000498534 MROH5Q6ZUA9 1318 aa15.16■□□□□ 0.02
CNOT4-211ENST00000498534 PDE4DIPQ5VU43 2346 aa15.15■□□□□ 0.02
CNOT4-211ENST00000498534 FRAT2O75474 233 aaPredicted RBP15.15■□□□□ 0.02
CNOT4-211ENST00000498534 USP2O75604 605 aaPredicted RBP15.15■□□□□ 0.02
CNOT4-211ENST00000498534 NBPF7P0C2Y1 421 aaPredicted RBP15.15■□□□□ 0.02
CNOT4-211ENST00000498534 ANKRD13AQ8IZ07 590 aa15.15■□□□□ 0.02
CNOT4-211ENST00000498534 SUCLG2Q96I99 432 aa15.15■□□□□ 0.02
CNOT4-211ENST00000498534 WNK4Q96J92 1243 aa15.15■□□□□ 0.02
CNOT4-211ENST00000498534 CLMNQ96JQ2 1002 aa15.15■□□□□ 0.02
CNOT4-211ENST00000498534 PUS3Q9BZE2 481 aaKnown RBP15.15■□□□□ 0.02
CNOT4-211ENST00000498534 RIPOR2Q9Y4F9 1068 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms