RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 GLIS2Q9BZE0 524 aaPredicted RBP15.88■□□□□ 0.13
HSPG2-213ENST00000498495 CREBZFQ9NS37 354 aa15.88■□□□□ 0.13
HSPG2-213ENST00000498495 A0A1B0GUL6 1792 aa15.87■□□□□ 0.13
HSPG2-213ENST00000498495 TRAF5O00463 557 aa15.87■□□□□ 0.13
HSPG2-213ENST00000498495 MVPQ14764 893 aaKnown RBP15.87■□□□□ 0.13
HSPG2-213ENST00000498495 USP48Q86UV5 1035 aa15.87■□□□□ 0.13
HSPG2-213ENST00000498495 CHMP4BQ9H444 224 aaKnown RBP15.87■□□□□ 0.13
HSPG2-213ENST00000498495 DDX19BQ9UMR2 479 aa15.87■□□□□ 0.13
HSPG2-213ENST00000498495 IQSEC3Q9UPP2 1182 aaPredicted RBP15.87■□□□□ 0.13
HSPG2-213ENST00000498495 AKAP2Q9Y2D5 859 aa15.87■□□□□ 0.13
HSPG2-213ENST00000498495 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
HSPG2-213ENST00000498495 FAM205AQ6ZU69 1335 aa15.87■□□□□ 0.13
HSPG2-213ENST00000498495 PSME4Q14997 1843 aa15.87■□□□□ 0.13
HSPG2-213ENST00000498495 F8W031 263 aaPredicted RBP15.86■□□□□ 0.13
HSPG2-213ENST00000498495 FMR1Q06787 632 aaKnown RBP eCLIP15.86■□□□□ 0.13
HSPG2-213ENST00000498495 CERS5Q8N5B7 392 aa15.86■□□□□ 0.13
HSPG2-213ENST00000498495 TIMM10P62072 90 aa15.85■□□□□ 0.13
HSPG2-213ENST00000498495 TFCP2Q12800 502 aa15.85■□□□□ 0.13
HSPG2-213ENST00000498495 CHAF1AQ13111 956 aaPredicted RBP15.85■□□□□ 0.13
HSPG2-213ENST00000498495 POLA2Q14181 598 aa15.85■□□□□ 0.13
HSPG2-213ENST00000498495 PDE3AQ14432 1141 aa15.85■□□□□ 0.13
HSPG2-213ENST00000498495 MFSD14BQ5SR56 506 aa15.85■□□□□ 0.13
HSPG2-213ENST00000498495 ANGEL2Q5VTE6 544 aaKnown RBP15.85■□□□□ 0.13
HSPG2-213ENST00000498495 KRT26Q7Z3Y9 468 aa15.85■□□□□ 0.13
HSPG2-213ENST00000498495 SULF1Q8IWU6 871 aa15.85■□□□□ 0.13
HSPG2-213ENST00000498495 SSH3Q8TE77 659 aa15.85■□□□□ 0.13
HSPG2-213ENST00000498495 KLRG1Q96E93 195 aa15.85■□□□□ 0.13
HSPG2-213ENST00000498495 GNL3LQ9NVN8 582 aaKnown RBP15.85■□□□□ 0.13
HSPG2-213ENST00000498495 WNT10BO00744 389 aa15.84■□□□□ 0.13
HSPG2-213ENST00000498495 SURF6O75683 361 aaKnown RBP15.84■□□□□ 0.13
HSPG2-213ENST00000498495 OS9Q13438 667 aaPredicted RBP15.84■□□□□ 0.13
HSPG2-213ENST00000498495 NBPF9Q3BBW0 867 aa15.84■□□□□ 0.13
HSPG2-213ENST00000498495 TBC1D22AQ8WUA7 517 aa15.84■□□□□ 0.13
HSPG2-213ENST00000498495 NEUROD6Q96NK8 337 aa15.84■□□□□ 0.13
HSPG2-213ENST00000498495 GGA3Q9NZ52 723 aa15.84■□□□□ 0.13
HSPG2-213ENST00000498495 CELF2O95319 508 aaKnown RBP15.83■□□□□ 0.12
HSPG2-213ENST00000498495 RBM5P52756 815 aaKnown RBP eCLIP15.83■□□□□ 0.12
HSPG2-213ENST00000498495 DLGAP5Q15398 846 aa15.83■□□□□ 0.12
HSPG2-213ENST00000498495 CST9Q5W186 159 aa15.83■□□□□ 0.12
HSPG2-213ENST00000498495 ZNF408Q9H9D4 720 aa15.83■□□□□ 0.12
HSPG2-213ENST00000498495 ABT1Q9ULW3 272 aaKnown RBP15.83■□□□□ 0.12
HSPG2-213ENST00000498495 TTF2Q9UNY4 1162 aaKnown RBP15.83■□□□□ 0.12
HSPG2-213ENST00000498495 ASTN2O75129 1339 aaPredicted RBP15.83■□□□□ 0.12
HSPG2-213ENST00000498495 A0A1B0GUL7 405 aa15.82■□□□□ 0.12
HSPG2-213ENST00000498495 DEFB115Q30KQ5 88 aa15.82■□□□□ 0.12
HSPG2-213ENST00000498495 C20orf194Q5TEA3 1177 aa15.82■□□□□ 0.12
HSPG2-213ENST00000498495 CEP85Q6P2H3 762 aa15.82■□□□□ 0.12
HSPG2-213ENST00000498495 MKRN1Q9UHC7 482 aaKnown RBP15.82■□□□□ 0.12
HSPG2-213ENST00000498495 ADM5C9JUS6 153 aa15.81■□□□□ 0.12
HSPG2-213ENST00000498495 MYO1BO43795 1136 aa15.81■□□□□ 0.12
HSPG2-213ENST00000498495 ADORA1P30542 326 aa15.81■□□□□ 0.12
HSPG2-213ENST00000498495 CFAP100Q494V2 611 aa15.81■□□□□ 0.12
HSPG2-213ENST00000498495 DLK2Q6UY11 383 aa15.81■□□□□ 0.12
HSPG2-213ENST00000498495 RPAP2Q8IXW5 612 aaPredicted RBP15.81■□□□□ 0.12
HSPG2-213ENST00000498495 MTMR14Q8NCE2 650 aa15.81■□□□□ 0.12
HSPG2-213ENST00000498495 WDR66Q8TBY9 1149 aa15.81■□□□□ 0.12
HSPG2-213ENST00000498495 XAGE2Q96GT9 111 aa15.81■□□□□ 0.12
HSPG2-213ENST00000498495 PITPNM2Q9BZ72 1349 aa15.81■□□□□ 0.12
HSPG2-213ENST00000498495 ZBTB40Q9NUA8 1239 aa15.81■□□□□ 0.12
HSPG2-213ENST00000498495 PHKA1P46020 1223 aa15.8■□□□□ 0.12
HSPG2-213ENST00000498495 GORABQ5T7V8 394 aa15.8■□□□□ 0.12
HSPG2-213ENST00000498495 CCDC102BQ68D86 513 aa15.8■□□□□ 0.12
HSPG2-213ENST00000498495 ZBED3Q96IU2 234 aaPredicted RBP15.8■□□□□ 0.12
HSPG2-213ENST00000498495 PRMT6Q96LA8 375 aaPredicted RBP15.8■□□□□ 0.12
HSPG2-213ENST00000498495 DENND2AQ9ULE3 1009 aa15.8■□□□□ 0.12
HSPG2-213ENST00000498495 NOP58Q9Y2X3 529 aaKnown RBP15.8■□□□□ 0.12
HSPG2-213ENST00000498495 POLR2AP24928 1970 aaKnown RBP15.79■□□□□ 0.12
HSPG2-213ENST00000498495 SEMA3EO15041 775 aa15.79■□□□□ 0.12
HSPG2-213ENST00000498495 SERPINA10Q9UK55 444 aa15.79■□□□□ 0.12
HSPG2-213ENST00000498495 SCAF8Q9UPN6 1271 aaKnown RBP15.79■□□□□ 0.12
HSPG2-213ENST00000498495 SUGT1Q9Y2Z0 365 aa15.79■□□□□ 0.12
HSPG2-213ENST00000498495 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.79■□□□□ 0.12
HSPG2-213ENST00000498495 ZNF646O15015 1829 aaPredicted RBP15.79■□□□□ 0.12
HSPG2-213ENST00000498495 RASSF10A6NK89 507 aa15.78■□□□□ 0.12
HSPG2-213ENST00000498495 HMMRO75330 724 aa15.78■□□□□ 0.12
HSPG2-213ENST00000498495 GRIK5Q16478 980 aa15.78■□□□□ 0.12
HSPG2-213ENST00000498495 C2orf69Q8N8R5 385 aa15.78■□□□□ 0.12
HSPG2-213ENST00000498495 GPR108Q9NPR9 543 aa15.78■□□□□ 0.12
HSPG2-213ENST00000498495 PCDHAC2Q9Y5I4 1007 aa15.78■□□□□ 0.12
HSPG2-213ENST00000498495 TLL2Q9Y6L7 1015 aa15.78■□□□□ 0.12
HSPG2-213ENST00000498495 SPDYE2BA6NHP3 402 aa15.77■□□□□ 0.12
HSPG2-213ENST00000498495 SPDYE6P0CI01 402 aa15.77■□□□□ 0.12
HSPG2-213ENST00000498495 CRKP46108 304 aa15.77■□□□□ 0.12
HSPG2-213ENST00000498495 HDLBPQ00341 1268 aaKnown RBP15.77■□□□□ 0.12
HSPG2-213ENST00000498495 HSP90AB4PQ58FF6 505 aa15.77■□□□□ 0.12
HSPG2-213ENST00000498495 PAXIP1Q6ZW49 1069 aaPredicted RBP15.77■□□□□ 0.12
HSPG2-213ENST00000498495 APOBEC3FQ8IUX4 373 aaKnown RBP15.77■□□□□ 0.12
HSPG2-213ENST00000498495 CDCA5Q96FF9 252 aa15.77■□□□□ 0.12
HSPG2-213ENST00000498495 MRIQ9BWK5 157 aa15.77■□□□□ 0.12
HSPG2-213ENST00000498495 CNTNAP1P78357 1384 aa15.76■□□□□ 0.11
HSPG2-213ENST00000498495 VEGFBP49765 207 aa15.76■□□□□ 0.11
HSPG2-213ENST00000498495 TNNI3KQ59H18 835 aa15.76■□□□□ 0.11
HSPG2-213ENST00000498495 PRAMEF18Q5VWM3 479 aa15.76■□□□□ 0.11
HSPG2-213ENST00000498495 SAPCD2Q86UD0 394 aa15.76■□□□□ 0.11
HSPG2-213ENST00000498495 ERC1Q8IUD2 1116 aa15.76■□□□□ 0.11
HSPG2-213ENST00000498495 ZGPATQ8N5A5 531 aaKnown RBP15.76■□□□□ 0.11
HSPG2-213ENST00000498495 JMYQ8N9B5 988 aa15.76■□□□□ 0.11
HSPG2-213ENST00000498495 TEKT1Q969V4 418 aa15.76■□□□□ 0.11
HSPG2-213ENST00000498495 VEZTQ9HBM0 779 aa15.76■□□□□ 0.11
HSPG2-213ENST00000498495 GBA2Q9HCG7 927 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms