RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 F8W031 263 aaPredicted RBP17.84■□□□□ 0.45
CCDC58-207ENST00000498466 SUPT20HL1Q3ZLR7 823 aa17.84■□□□□ 0.45
CCDC58-207ENST00000498466 HABP4Q5JVS0 413 aaKnown RBP17.84■□□□□ 0.45
CCDC58-207ENST00000498466 OTUD7BQ6GQQ9 843 aa17.84■□□□□ 0.45
CCDC58-207ENST00000498466 MTMR14Q8NCE2 650 aa17.84■□□□□ 0.45
CCDC58-207ENST00000498466 ERO1AQ96HE7 468 aa17.84■□□□□ 0.45
CCDC58-207ENST00000498466 PCDHAC2Q9Y5I4 1007 aa17.84■□□□□ 0.45
CCDC58-207ENST00000498466 SSC5DA1L4H1 1573 aa17.83■□□□□ 0.45
CCDC58-207ENST00000498466 GCKRQ14397 625 aa17.83■□□□□ 0.44
CCDC58-207ENST00000498466 CFAP100Q494V2 611 aa17.83■□□□□ 0.44
CCDC58-207ENST00000498466 CERS5Q8N5B7 392 aa17.83■□□□□ 0.44
CCDC58-207ENST00000498466 CD99L2Q8TCZ2 262 aa17.83■□□□□ 0.44
CCDC58-207ENST00000498466 TSR2Q969E8 191 aaKnown RBP17.83■□□□□ 0.44
CCDC58-207ENST00000498466 PLA2G12BQ9BX93 195 aa17.83■□□□□ 0.44
CCDC58-207ENST00000498466 VEZTQ9HBM0 779 aa17.83■□□□□ 0.44
CCDC58-207ENST00000498466 PTPN22Q9Y2R2 807 aa17.83■□□□□ 0.44
CCDC58-207ENST00000498466 UNCXA6NJT0 531 aa17.82■□□□□ 0.44
CCDC58-207ENST00000498466 SNAP23O00161 211 aa17.82■□□□□ 0.44
CCDC58-207ENST00000498466 CSF1RP07333 972 aa17.82■□□□□ 0.44
CCDC58-207ENST00000498466 IREB2P48200 963 aaKnown RBP17.82■□□□□ 0.44
CCDC58-207ENST00000498466 CRHR2Q13324 411 aa17.82■□□□□ 0.44
CCDC58-207ENST00000498466 G2E3Q7L622 706 aa17.82■□□□□ 0.44
CCDC58-207ENST00000498466 MYH16Q9H6N6 1097 aa17.82■□□□□ 0.44
CCDC58-207ENST00000498466 ANKRD18BA2A2Z9 1011 aa17.81■□□□□ 0.44
CCDC58-207ENST00000498466 SPDYE2BA6NHP3 402 aa17.81■□□□□ 0.44
CCDC58-207ENST00000498466 TAF5LO75529 589 aa17.81■□□□□ 0.44
CCDC58-207ENST00000498466 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
CCDC58-207ENST00000498466 SPDYE6P0CI01 402 aa17.81■□□□□ 0.44
CCDC58-207ENST00000498466 NBPF12Q5TAG4 269 aaPredicted RBP17.81■□□□□ 0.44
CCDC58-207ENST00000498466 EFCC1Q9HA90 598 aa17.81■□□□□ 0.44
CCDC58-207ENST00000498466 GJA5P36382 358 aa17.8■□□□□ 0.44
CCDC58-207ENST00000498466 RBM5P52756 815 aaKnown RBP eCLIP17.8■□□□□ 0.44
CCDC58-207ENST00000498466 CASP7P55210 303 aa17.8■□□□□ 0.44
CCDC58-207ENST00000498466 TWISTNBQ3B726 338 aaPredicted RBP17.8■□□□□ 0.44
CCDC58-207ENST00000498466 ZNF804AQ7Z570 1209 aa17.8■□□□□ 0.44
CCDC58-207ENST00000498466 ANKRD13AQ8IZ07 590 aa17.8■□□□□ 0.44
CCDC58-207ENST00000498466 HELBQ8NG08 1087 aaPredicted RBP17.8■□□□□ 0.44
CCDC58-207ENST00000498466 PRMT6Q96LA8 375 aaPredicted RBP17.8■□□□□ 0.44
CCDC58-207ENST00000498466 IRS2Q9Y4H2 1338 aa17.79■□□□□ 0.44
CCDC58-207ENST00000498466 USP2O75604 605 aaPredicted RBP17.79■□□□□ 0.44
CCDC58-207ENST00000498466 EN2P19622 333 aaPredicted RBP17.79■□□□□ 0.44
CCDC58-207ENST00000498466 SP3Q02447 781 aa17.79■□□□□ 0.44
CCDC58-207ENST00000498466 RASA3Q14644 834 aa17.79■□□□□ 0.44
CCDC58-207ENST00000498466 ARMC5Q96C12 935 aa17.79■□□□□ 0.44
CCDC58-207ENST00000498466 PRKRIP1Q9H875 184 aaPredicted RBP17.79■□□□□ 0.44
CCDC58-207ENST00000498466 JAG2Q9Y219 1238 aa17.79■□□□□ 0.44
CCDC58-207ENST00000498466 IL1R1P14778 569 aa17.78■□□□□ 0.44
CCDC58-207ENST00000498466 FLIIQ13045 1269 aa17.78■□□□□ 0.44
CCDC58-207ENST00000498466 FKBP5Q13451 457 aaPredicted RBP17.78■□□□□ 0.44
CCDC58-207ENST00000498466 C15orf52Q6ZUT6 534 aaKnown RBP17.78■□□□□ 0.44
CCDC58-207ENST00000498466 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
CCDC58-207ENST00000498466 PTPN18Q99952 460 aa17.78■□□□□ 0.44
CCDC58-207ENST00000498466 CHMP3Q9Y3E7 222 aa17.78■□□□□ 0.44
CCDC58-207ENST00000498466 AOX1Q06278 1338 aa17.77■□□□□ 0.44
CCDC58-207ENST00000498466 FKBP1AP62942 108 aaKnown RBP17.77■□□□□ 0.44
CCDC58-207ENST00000498466 IFIT5Q13325 482 aaKnown RBP17.77■□□□□ 0.44
CCDC58-207ENST00000498466 LINS1Q8NG48 757 aa17.77■□□□□ 0.44
CCDC58-207ENST00000498466 DNAAF4Q8WXU2 420 aa17.77■□□□□ 0.44
CCDC58-207ENST00000498466 OPTNQ96CV9 577 aa17.77■□□□□ 0.44
CCDC58-207ENST00000498466 TMEM106CQ9BVX2 250 aa17.77■□□□□ 0.44
CCDC58-207ENST00000498466 ELP3Q9H9T3 547 aa17.77■□□□□ 0.44
CCDC58-207ENST00000498466 TESPA1A2RU30 521 aaPredicted RBP17.76■□□□□ 0.43
CCDC58-207ENST00000498466 TNFAIP1Q13829 316 aa17.75■□□□□ 0.43
CCDC58-207ENST00000498466 PLIN1O60240 522 aa17.74■□□□□ 0.43
CCDC58-207ENST00000498466 CAP1Q01518 475 aa17.74■□□□□ 0.43
CCDC58-207ENST00000498466 ARHGEF6Q15052 776 aa17.74■□□□□ 0.43
CCDC58-207ENST00000498466 TAF7LQ5H9L4 462 aa17.74■□□□□ 0.43
CCDC58-207ENST00000498466 ECM29Q5VYK3 1845 aa17.74■□□□□ 0.43
CCDC58-207ENST00000498466 LAMB1P07942 1786 aa17.74■□□□□ 0.43
CCDC58-207ENST00000498466 FOXO4P98177 505 aa17.73■□□□□ 0.43
CCDC58-207ENST00000498466 SPDYE2Q495Y8 402 aa17.73■□□□□ 0.43
CCDC58-207ENST00000498466 SLC9C1Q4G0N8 1177 aa17.73■□□□□ 0.43
CCDC58-207ENST00000498466 NBPF11Q86T75 865 aa17.73■□□□□ 0.43
CCDC58-207ENST00000498466 ZNF333Q96JL9 665 aa17.73■□□□□ 0.43
CCDC58-207ENST00000498466 MS4A4AQ96JQ5 239 aa17.73■□□□□ 0.43
CCDC58-207ENST00000498466 ZFYVE28Q9HCC9 887 aa17.73■□□□□ 0.43
CCDC58-207ENST00000498466 ZNF70Q9UC06 446 aaPredicted RBP17.73■□□□□ 0.43
CCDC58-207ENST00000498466 RBBP6Q7Z6E9 1792 aaKnown RBP17.73■□□□□ 0.43
CCDC58-207ENST00000498466 FXR1P51114 621 aaKnown RBP eCLIP17.72■□□□□ 0.43
CCDC58-207ENST00000498466 TAF1CQ15572 869 aaPredicted RBP17.72■□□□□ 0.43
CCDC58-207ENST00000498466 CCDC57Q2TAC2 916 aa17.72■□□□□ 0.43
CCDC58-207ENST00000498466 SLC4A8Q2Y0W8 1093 aa17.72■□□□□ 0.43
CCDC58-207ENST00000498466 MFSD14BQ5SR56 506 aa17.72■□□□□ 0.43
CCDC58-207ENST00000498466 LDHAL6AQ6ZMR3 332 aa17.72■□□□□ 0.43
CCDC58-207ENST00000498466 WWC1Q8IX03 1113 aa17.72■□□□□ 0.43
CCDC58-207ENST00000498466 TDRD3Q9H7E2 651 aaKnown RBP17.72■□□□□ 0.43
CCDC58-207ENST00000498466 CNNM1Q9NRU3 951 aa17.72■□□□□ 0.43
CCDC58-207ENST00000498466 TTF2Q9UNY4 1162 aaKnown RBP17.72■□□□□ 0.43
CCDC58-207ENST00000498466 PTCH2Q9Y6C5 1203 aa17.72■□□□□ 0.43
CCDC58-207ENST00000498466 CCL15-CCL14A0A0B4J2E2 113 aa17.71■□□□□ 0.43
CCDC58-207ENST00000498466 GTF2A2P52657 109 aa17.71■□□□□ 0.43
CCDC58-207ENST00000498466 CACNB1Q02641 598 aaPredicted RBP17.71■□□□□ 0.43
CCDC58-207ENST00000498466 CCL15Q16663 113 aa17.71■□□□□ 0.43
CCDC58-207ENST00000498466 CCDC27Q2M243 656 aa17.71■□□□□ 0.43
CCDC58-207ENST00000498466 LMBR1LQ6UX01 489 aa17.71■□□□□ 0.43
CCDC58-207ENST00000498466 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.71■□□□□ 0.43
CCDC58-207ENST00000498466 BRI3BPQ8WY22 251 aa17.71■□□□□ 0.43
CCDC58-207ENST00000498466 ZNF594Q96JF6 807 aaPredicted RBP17.71■□□□□ 0.43
CCDC58-207ENST00000498466 SERPINA10Q9UK55 444 aa17.71■□□□□ 0.43
CCDC58-207ENST00000498466 FAM205AQ6ZU69 1335 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms