RNA–Protein interactions for RNA: ENST00000498434.1

RTCB-206, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-206ENST00000498434 MPHOSPH8Q99549 860 aa10.04□□□□□ -0.8
RTCB-206ENST00000498434 SLKQ9H2G2 1235 aaPredicted RBP10.04□□□□□ -0.8
RTCB-206ENST00000498434 BOLA2Q9H3K6 86 aa10.04□□□□□ -0.8
RTCB-206ENST00000498434 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
RTCB-206ENST00000498434 RYDENQ9NUL5 291 aaKnown RBP10.04□□□□□ -0.8
RTCB-206ENST00000498434 DBNLQ9UJU6 430 aaKnown RBP10.04□□□□□ -0.8
RTCB-206ENST00000498434 RTL9Q8NET4 1388 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 NUP98P52948 1817 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 SPEF2Q9C093 1822 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 A0A1B0GUL7 405 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 GOLGA6L22H0YM25 854 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 RPS6KA4O75676 772 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 ATRNO75882 1429 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 CAMTA2O94983 1202 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 MAP4K4O95819 1239 aaPredicted RBP10.03□□□□□ -0.8
RTCB-206ENST00000498434 IFIT1P09914 478 aaKnown RBP10.03□□□□□ -0.8
RTCB-206ENST00000498434 UQCRFS1P1P0C7P4 283 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 IGHMBP2P38935 993 aaKnown RBP10.03□□□□□ -0.8
RTCB-206ENST00000498434 NEK4P51957 841 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 KBTBD3Q8NAB2 608 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 CHMP4CQ96CF2 233 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 CDC5LQ99459 802 aaKnown RBP10.03□□□□□ -0.8
RTCB-206ENST00000498434 TM6SF1Q9BZW5 370 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.03□□□□□ -0.8
RTCB-206ENST00000498434 ANTXR1Q9H6X2 564 aa10.03□□□□□ -0.8
RTCB-206ENST00000498434 NIP7Q9Y221 180 aaKnown RBP eCLIP10.03□□□□□ -0.8
RTCB-206ENST00000498434 RTCBQ9Y3I0 505 aaKnown RBP10.03□□□□□ -0.8
RTCB-206ENST00000498434 V9GY48 417 aaPredicted RBP10.03□□□□□ -0.8
RTCB-206ENST00000498434 NHSQ6T4R5 1651 aa10.02□□□□□ -0.8
RTCB-206ENST00000498434 ZNF609O15014 1411 aa10.02□□□□□ -0.81
RTCB-206ENST00000498434 GTF2E1P29083 439 aaPredicted RBP10.02□□□□□ -0.81
RTCB-206ENST00000498434 ITPK1Q13572 414 aa10.02□□□□□ -0.81
RTCB-206ENST00000498434 ANKRD1Q15327 319 aa10.02□□□□□ -0.81
RTCB-206ENST00000498434 NFKBIBQ15653 356 aa10.02□□□□□ -0.81
RTCB-206ENST00000498434 FAM196AQ6ZSG2 479 aa10.02□□□□□ -0.81
RTCB-206ENST00000498434 DDX27Q96GQ7 796 aaKnown RBP10.02□□□□□ -0.81
RTCB-206ENST00000498434 INTS4Q96HW7 963 aaKnown RBP10.02□□□□□ -0.81
RTCB-206ENST00000498434 ZNF512BQ96KM6 892 aaPredicted RBP10.02□□□□□ -0.81
RTCB-206ENST00000498434 DNAJC2Q99543 621 aaKnown RBP10.02□□□□□ -0.81
RTCB-206ENST00000498434 DBNDD2Q9BQY9 259 aa10.02□□□□□ -0.81
RTCB-206ENST00000498434 LSG1Q9H089 658 aaKnown RBP10.02□□□□□ -0.81
RTCB-206ENST00000498434 HELLSQ9NRZ9 838 aa10.02□□□□□ -0.81
RTCB-206ENST00000498434 PAG1Q9NWQ8 432 aa10.02□□□□□ -0.81
RTCB-206ENST00000498434 CCNL1Q9UK58 526 aaPredicted RBP10.02□□□□□ -0.81
RTCB-206ENST00000498434 CCDC171Q6TFL3 1326 aa10.02□□□□□ -0.81
RTCB-206ENST00000498434 MYH3P11055 1940 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 KCNQ2O43526 872 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 SLC5A1P13866 664 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 SSFA2P28290 1259 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 PUM3Q15397 648 aaKnown RBP10.01□□□□□ -0.81
RTCB-206ENST00000498434 ATP2B3Q16720 1220 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 MCMDC2Q4G0Z9 681 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 SLC27A3Q5K4L6 730 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 LPIN2Q92539 896 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 ZNF775Q96BV0 537 aaPredicted RBP10.01□□□□□ -0.81
RTCB-206ENST00000498434 ZSCAN31Q96LW9 406 aaPredicted RBP10.01□□□□□ -0.81
RTCB-206ENST00000498434 SETDB2Q96T68 719 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 QTRT2Q9H974 415 aaKnown RBP10.01□□□□□ -0.81
RTCB-206ENST00000498434 EMILIN3Q9NT22 766 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 NARFQ9UHQ1 456 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 RIPOR2Q9Y4F9 1068 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 CYP46A1Q9Y6A2 500 aa10.01□□□□□ -0.81
RTCB-206ENST00000498434 COL5A3P25940 1745 aaPredicted RBP10□□□□□ -0.81
RTCB-206ENST00000498434 PDE8BO95263 885 aa10□□□□□ -0.81
RTCB-206ENST00000498434 HMGB1P09429 215 aaKnown RBP10□□□□□ -0.81
RTCB-206ENST00000498434 NMIQ13287 307 aaPredicted RBP10□□□□□ -0.81
RTCB-206ENST00000498434 MFSD10Q14728 455 aa10□□□□□ -0.81
RTCB-206ENST00000498434 LRRC24Q50LG9 513 aa10□□□□□ -0.81
RTCB-206ENST00000498434 TJAP1Q5JTD0 557 aa10□□□□□ -0.81
RTCB-206ENST00000498434 SUSD4Q5VX71 490 aa10□□□□□ -0.81
RTCB-206ENST00000498434 TPTE2Q6XPS3 522 aa10□□□□□ -0.81
RTCB-206ENST00000498434 SEPT12Q8IYM1 358 aa10□□□□□ -0.81
RTCB-206ENST00000498434 MAP4K1Q92918 833 aa10□□□□□ -0.81
RTCB-206ENST00000498434 XAGE2Q96GT9 111 aa10□□□□□ -0.81
RTCB-206ENST00000498434 GREM2Q9H772 168 aa10□□□□□ -0.81
RTCB-206ENST00000498434 TLR7Q9NYK1 1049 aaKnown RBP10□□□□□ -0.81
RTCB-206ENST00000498434 NTSR2O95665 410 aa9.99□□□□□ -0.81
RTCB-206ENST00000498434 TIMM10P62072 90 aa9.99□□□□□ -0.81
RTCB-206ENST00000498434 TSGA10IPQ3SY00 556 aa9.99□□□□□ -0.81
RTCB-206ENST00000498434 VPS53Q5VIR6 699 aa9.99□□□□□ -0.81
RTCB-206ENST00000498434 LINC00116Q8NCU8 138 aa9.99□□□□□ -0.81
RTCB-206ENST00000498434 KCNB2Q92953 911 aa9.99□□□□□ -0.81
RTCB-206ENST00000498434 ZNF594Q96JF6 807 aaPredicted RBP9.99□□□□□ -0.81
RTCB-206ENST00000498434 SH2B1Q9NRF2 756 aaPredicted RBP9.99□□□□□ -0.81
RTCB-206ENST00000498434 GNL3LQ9NVN8 582 aaKnown RBP9.99□□□□□ -0.81
RTCB-206ENST00000498434 CTNNA3Q9UI47 895 aa9.99□□□□□ -0.81
RTCB-206ENST00000498434 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.99□□□□□ -0.81
RTCB-206ENST00000498434 UBN2Q6ZU65 1347 aa9.99□□□□□ -0.81
RTCB-206ENST00000498434 GOLIM4O00461 696 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 GNPATO15228 680 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 NPHP1O15259 732 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 RNF113AO15541 343 aaKnown RBP9.98□□□□□ -0.81
RTCB-206ENST00000498434 IGSF3O75054 1194 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 RFC4P35249 363 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 SF3B3Q15393 1217 aaKnown RBP9.98□□□□□ -0.81
RTCB-206ENST00000498434 SKOR2Q2VWA4 1001 aaPredicted RBP9.98□□□□□ -0.81
RTCB-206ENST00000498434 SLC10A5Q5PT55 438 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 C6orf132Q5T0Z8 1188 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 TRAPPC3LQ5T215 181 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms