RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 CNPY2Q9Y2B0 182 aa14.74□□□□□ -0.05
AFF3-215ENST00000498090 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.74□□□□□ -0.05
AFF3-215ENST00000498090 ELP1O95163 1332 aa14.73□□□□□ -0.05
AFF3-215ENST00000498090 RPS6KB1P23443 525 aa14.73□□□□□ -0.05
AFF3-215ENST00000498090 SF3B3Q15393 1217 aaKnown RBP14.73□□□□□ -0.05
AFF3-215ENST00000498090 CCDC57Q2TAC2 916 aa14.73□□□□□ -0.05
AFF3-215ENST00000498090 SEC31BQ9NQW1 1179 aa14.73□□□□□ -0.05
AFF3-215ENST00000498090 HSP90B1P14625 803 aaKnown RBP14.72□□□□□ -0.05
AFF3-215ENST00000498090 IFIT5Q13325 482 aaKnown RBP14.72□□□□□ -0.05
AFF3-215ENST00000498090 ME3Q16798 604 aa14.72□□□□□ -0.05
AFF3-215ENST00000498090 CCDC152Q4G0S7 254 aa14.72□□□□□ -0.05
AFF3-215ENST00000498090 FAM227BQ96M60 508 aa14.72□□□□□ -0.05
AFF3-215ENST00000498090 PUS3Q9BZE2 481 aaKnown RBP14.72□□□□□ -0.05
AFF3-215ENST00000498090 ATF5Q9Y2D1 282 aaPredicted RBP14.72□□□□□ -0.05
AFF3-215ENST00000498090 ANKRD18BA2A2Z9 1011 aa14.71□□□□□ -0.05
AFF3-215ENST00000498090 NPHP1O15259 732 aa14.71□□□□□ -0.05
AFF3-215ENST00000498090 KRT85P78386 507 aa14.71□□□□□ -0.05
AFF3-215ENST00000498090 ST5P78524 1137 aa14.71□□□□□ -0.05
AFF3-215ENST00000498090 LRRC24Q50LG9 513 aa14.71□□□□□ -0.05
AFF3-215ENST00000498090 TNNI3KQ59H18 835 aa14.71□□□□□ -0.05
AFF3-215ENST00000498090 ATG9AQ7Z3C6 839 aa14.71□□□□□ -0.05
AFF3-215ENST00000498090 CHMP4CQ96CF2 233 aa14.71□□□□□ -0.05
AFF3-215ENST00000498090 BOLA2Q9H3K6 86 aa14.71□□□□□ -0.05
AFF3-215ENST00000498090 GDPD2Q9HCC8 539 aa14.71□□□□□ -0.05
AFF3-215ENST00000498090 PARP3Q9Y6F1 533 aa14.71□□□□□ -0.05
AFF3-215ENST00000498090 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
AFF3-215ENST00000498090 FPGT-TNNI3KV9GXZ4 949 aa14.71□□□□□ -0.05
AFF3-215ENST00000498090 RRP9O43818 475 aaKnown RBP14.71□□□□□ -0.06
AFF3-215ENST00000498090 LARGE1O95461 756 aa14.71□□□□□ -0.06
AFF3-215ENST00000498090 LARP1BQ659C4 914 aaKnown RBP14.71□□□□□ -0.06
AFF3-215ENST00000498090 NLRP3Q96P20 1036 aa14.71□□□□□ -0.06
AFF3-215ENST00000498090 MTFR1LQ9H019 292 aa14.71□□□□□ -0.06
AFF3-215ENST00000498090 SPON1Q9HCB6 807 aa14.71□□□□□ -0.06
AFF3-215ENST00000498090 GPR108Q9NPR9 543 aa14.71□□□□□ -0.06
AFF3-215ENST00000498090 TPCN1Q9ULQ1 816 aa14.71□□□□□ -0.06
AFF3-215ENST00000498090 ANKRD31Q8N7Z5 1873 aa14.71□□□□□ -0.06
AFF3-215ENST00000498090 A0A0D9SFI3 127 aa14.7□□□□□ -0.06
AFF3-215ENST00000498090 EYA2O00167 538 aa14.7□□□□□ -0.06
AFF3-215ENST00000498090 TAF5LO75529 589 aa14.7□□□□□ -0.06
AFF3-215ENST00000498090 HMGB1P09429 215 aaKnown RBP14.7□□□□□ -0.06
AFF3-215ENST00000498090 RNF214Q8ND24 703 aa14.7□□□□□ -0.06
AFF3-215ENST00000498090 SLC16A10Q8TF71 515 aa14.7□□□□□ -0.06
AFF3-215ENST00000498090 SCAND2PQ9GZW5 306 aaPredicted RBP14.7□□□□□ -0.06
AFF3-215ENST00000498090 FIBPO43427 364 aa14.69□□□□□ -0.06
AFF3-215ENST00000498090 CIAO1O76071 339 aa14.69□□□□□ -0.06
AFF3-215ENST00000498090 PTMAP06454 111 aaKnown RBP14.69□□□□□ -0.06
AFF3-215ENST00000498090 TPM3P06753 285 aa14.69□□□□□ -0.06
AFF3-215ENST00000498090 CPA1P15085 419 aa14.69□□□□□ -0.06
AFF3-215ENST00000498090 TAF7LQ5H9L4 462 aa14.69□□□□□ -0.06
AFF3-215ENST00000498090 HAUS7Q99871 368 aa14.69□□□□□ -0.06
AFF3-215ENST00000498090 TLR7Q9NYK1 1049 aaKnown RBP14.69□□□□□ -0.06
AFF3-215ENST00000498090 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.69□□□□□ -0.06
AFF3-215ENST00000498090 FOXD4L6Q3SYB3 417 aaPredicted RBP14.68□□□□□ -0.06
AFF3-215ENST00000498090 CRY2Q49AN0 593 aa14.68□□□□□ -0.06
AFF3-215ENST00000498090 FOXD4L3Q6VB84 417 aaPredicted RBP14.68□□□□□ -0.06
AFF3-215ENST00000498090 KLRG2A4D1S0 409 aaPredicted RBP14.68□□□□□ -0.06
AFF3-215ENST00000498090 VPS37CA5D8V6 355 aaPredicted RBP14.68□□□□□ -0.06
AFF3-215ENST00000498090 DNM1Q05193 864 aaKnown RBP14.68□□□□□ -0.06
AFF3-215ENST00000498090 ST3GAL1Q11201 340 aa14.68□□□□□ -0.06
AFF3-215ENST00000498090 TFCP2Q12800 502 aa14.68□□□□□ -0.06
AFF3-215ENST00000498090 MCMDC2Q4G0Z9 681 aa14.68□□□□□ -0.06
AFF3-215ENST00000498090 CELF1Q92879 486 aaKnown RBP14.68□□□□□ -0.06
AFF3-215ENST00000498090 DBNLQ9UJU6 430 aaKnown RBP14.68□□□□□ -0.06
AFF3-215ENST00000498090 RIPOR2Q9Y4F9 1068 aa14.68□□□□□ -0.06
AFF3-215ENST00000498090 COL11A2P13942 1736 aaPredicted RBP14.67□□□□□ -0.06
AFF3-215ENST00000498090 CCDC192P0DO97 292 aa14.67□□□□□ -0.06
AFF3-215ENST00000498090 IL15P40933 162 aaPredicted RBP14.67□□□□□ -0.06
AFF3-215ENST00000498090 KIAA2012Q0VF49 1180 aa14.67□□□□□ -0.06
AFF3-215ENST00000498090 NEK1Q96PY6 1258 aa14.67□□□□□ -0.06
AFF3-215ENST00000498090 FUCA2Q9BTY2 467 aa14.67□□□□□ -0.06
AFF3-215ENST00000498090 FBXO3Q9UK99 471 aa14.67□□□□□ -0.06
AFF3-215ENST00000498090 C10orf71Q711Q0 1435 aa14.66□□□□□ -0.06
AFF3-215ENST00000498090 SPEF2Q9C093 1822 aa14.66□□□□□ -0.06
AFF3-215ENST00000498090 TOB2Q14106 344 aaPredicted RBP14.66□□□□□ -0.06
AFF3-215ENST00000498090 LDHAL6AQ6ZMR3 332 aa14.66□□□□□ -0.06
AFF3-215ENST00000498090 SLC51AQ86UW1 340 aa14.66□□□□□ -0.06
AFF3-215ENST00000498090 CDC5LQ99459 802 aaKnown RBP14.66□□□□□ -0.06
AFF3-215ENST00000498090 LARP6Q9BRS8 491 aaKnown RBP14.66□□□□□ -0.06
AFF3-215ENST00000498090 LLPHQ9BRT6 129 aaKnown RBP14.66□□□□□ -0.06
AFF3-215ENST00000498090 BRIP1Q9BX63 1249 aa14.66□□□□□ -0.06
AFF3-215ENST00000498090 HELLSQ9NRZ9 838 aa14.66□□□□□ -0.06
AFF3-215ENST00000498090 KIF3AQ9Y496 699 aa14.66□□□□□ -0.06
AFF3-215ENST00000498090 TAF1P21675 1872 aa14.66□□□□□ -0.06
AFF3-215ENST00000498090 ZNF609O15014 1411 aa14.66□□□□□ -0.06
AFF3-215ENST00000498090 KDM4AO75164 1064 aa14.65□□□□□ -0.06
AFF3-215ENST00000498090 VGLL2Q8N8G2 317 aa14.65□□□□□ -0.06
AFF3-215ENST00000498090 KBTBD3Q8NAB2 608 aa14.65□□□□□ -0.06
AFF3-215ENST00000498090 ZSCAN16Q9H4T2 348 aaPredicted RBP14.65□□□□□ -0.06
AFF3-215ENST00000498090 CNNM1Q9NRU3 951 aa14.65□□□□□ -0.06
AFF3-215ENST00000498090 IGHMBP2P38935 993 aaKnown RBP14.65□□□□□ -0.06
AFF3-215ENST00000498090 LRRFIP1Q32MZ4 808 aaKnown RBP14.65□□□□□ -0.06
AFF3-215ENST00000498090 DDX46Q7L014 1031 aaKnown RBP14.65□□□□□ -0.06
AFF3-215ENST00000498090 ZNF589Q86UQ0 364 aaPredicted RBP14.65□□□□□ -0.06
AFF3-215ENST00000498090 ANKRD18AQ8IVF6 992 aa14.65□□□□□ -0.06
AFF3-215ENST00000498090 NECAB1Q8N987 351 aa14.65□□□□□ -0.06
AFF3-215ENST00000498090 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.65□□□□□ -0.06
AFF3-215ENST00000498090 GTF3C6Q969F1 213 aa14.65□□□□□ -0.06
AFF3-215ENST00000498090 DSCC1Q9BVC3 393 aa14.65□□□□□ -0.06
AFF3-215ENST00000498090 DDX19AQ9NUU7 478 aaKnown RBP14.65□□□□□ -0.06
AFF3-215ENST00000498090 CAVIN2O95810 425 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms