RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
PTPRN-218ENST00000497977 USP48Q86UV5 1035 aa12.82□□□□□ -0.36
PTPRN-218ENST00000497977 KIAA0825Q8IV33 1275 aa12.82□□□□□ -0.36
PTPRN-218ENST00000497977 SLF2Q8IX21 1173 aa12.82□□□□□ -0.36
PTPRN-218ENST00000497977 ABT1Q9ULW3 272 aaKnown RBP12.82□□□□□ -0.36
PTPRN-218ENST00000497977 MAST3O60307 1309 aa12.82□□□□□ -0.36
PTPRN-218ENST00000497977 PASKQ96RG2 1323 aa12.82□□□□□ -0.36
PTPRN-218ENST00000497977 PITPNM2Q9BZ72 1349 aa12.82□□□□□ -0.36
PTPRN-218ENST00000497977 WDR90Q96KV7 1748 aa12.82□□□□□ -0.36
PTPRN-218ENST00000497977 FGFR2P21802 821 aa12.81□□□□□ -0.36
PTPRN-218ENST00000497977 BCAMP50895 628 aa12.81□□□□□ -0.36
PTPRN-218ENST00000497977 HIRAP54198 1017 aaPredicted RBP12.81□□□□□ -0.36
PTPRN-218ENST00000497977 HDLBPQ00341 1268 aaKnown RBP12.81□□□□□ -0.36
PTPRN-218ENST00000497977 CCDC158Q5M9N0 1113 aa12.81□□□□□ -0.36
PTPRN-218ENST00000497977 SPTY2D1Q68D10 685 aaPredicted RBP12.81□□□□□ -0.36
PTPRN-218ENST00000497977 APOBEC3FQ8IUX4 373 aaKnown RBP12.81□□□□□ -0.36
PTPRN-218ENST00000497977 VGLL2Q8N8G2 317 aa12.81□□□□□ -0.36
PTPRN-218ENST00000497977 MTMR14Q8NCE2 650 aa12.81□□□□□ -0.36
PTPRN-218ENST00000497977 PANK1Q8TE04 598 aa12.81□□□□□ -0.36
PTPRN-218ENST00000497977 SSH3Q8TE77 659 aa12.81□□□□□ -0.36
PTPRN-218ENST00000497977 KLRG1Q96E93 195 aa12.81□□□□□ -0.36
PTPRN-218ENST00000497977 SERPINA10Q9UK55 444 aa12.81□□□□□ -0.36
PTPRN-218ENST00000497977 ZBTB22O15209 634 aa12.8□□□□□ -0.36
PTPRN-218ENST00000497977 IGSF3O75054 1194 aa12.8□□□□□ -0.36
PTPRN-218ENST00000497977 CELF2O95319 508 aaKnown RBP12.8□□□□□ -0.36
PTPRN-218ENST00000497977 RLBP1P12271 317 aa12.8□□□□□ -0.36
PTPRN-218ENST00000497977 KLRK1P26718 216 aa12.8□□□□□ -0.36
PTPRN-218ENST00000497977 TNFAIP1Q13829 316 aa12.8□□□□□ -0.36
PTPRN-218ENST00000497977 TRPM4Q8TD43 1214 aa12.8□□□□□ -0.36
PTPRN-218ENST00000497977 GPR108Q9NPR9 543 aa12.8□□□□□ -0.36
PTPRN-218ENST00000497977 TTF2Q9UNY4 1162 aaKnown RBP12.8□□□□□ -0.36
PTPRN-218ENST00000497977 SUPT16HQ9Y5B9 1047 aaKnown RBP12.8□□□□□ -0.36
PTPRN-218ENST00000497977 ZNF609O15014 1411 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 UQCRFS1P1P0C7P4 283 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 TNNI2P48788 182 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 TIMM10P62072 90 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 FKBP1BP68106 108 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 IRX6P78412 446 aaPredicted RBP12.79□□□□□ -0.36
PTPRN-218ENST00000497977 TFCP2Q12800 502 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 CHAF1AQ13111 956 aaPredicted RBP12.79□□□□□ -0.36
PTPRN-218ENST00000497977 POLA2Q14181 598 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 SUPT20HL1Q3ZLR7 823 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 C20orf194Q5TEA3 1177 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 ANGEL2Q5VTE6 544 aaKnown RBP12.79□□□□□ -0.36
PTPRN-218ENST00000497977 DNAJC5GQ8N7S2 189 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 HOOK2Q96ED9 719 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 HHIPL1Q96JK4 782 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 TMOD2Q9NZR1 351 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 PA2G4Q9UQ80 394 aaKnown RBP12.79□□□□□ -0.36
PTPRN-218ENST00000497977 COG6Q9Y2V7 657 aa12.79□□□□□ -0.36
PTPRN-218ENST00000497977 A0A1B0GUL7 405 aa12.78□□□□□ -0.36
PTPRN-218ENST00000497977 F8W031 263 aaPredicted RBP12.78□□□□□ -0.36
PTPRN-218ENST00000497977 WNT10BO00744 389 aa12.78□□□□□ -0.36
PTPRN-218ENST00000497977 AAMPQ13685 434 aa12.78□□□□□ -0.36
PTPRN-218ENST00000497977 TEKT1Q969V4 418 aa12.78□□□□□ -0.36
PTPRN-218ENST00000497977 CCDC102AQ96A19 550 aa12.78□□□□□ -0.36
PTPRN-218ENST00000497977 GLIS2Q9BZE0 524 aaPredicted RBP12.78□□□□□ -0.36
PTPRN-218ENST00000497977 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
PTPRN-218ENST00000497977 GGA3Q9NZ52 723 aa12.78□□□□□ -0.36
PTPRN-218ENST00000497977 NOP58Q9Y2X3 529 aaKnown RBP12.78□□□□□ -0.36
PTPRN-218ENST00000497977 PPP2R3BQ9Y5P8 575 aa12.78□□□□□ -0.36
PTPRN-218ENST00000497977 IRS2Q9Y4H2 1338 aa12.78□□□□□ -0.36
PTPRN-218ENST00000497977 SBF1O95248 1867 aa12.77□□□□□ -0.37
PTPRN-218ENST00000497977 PNMA6EA0A0J9YXQ4 647 aa12.77□□□□□ -0.37
PTPRN-218ENST00000497977 RAB11FIP3O75154 756 aa12.77□□□□□ -0.37
PTPRN-218ENST00000497977 LDHBP07195 334 aaKnown RBP12.77□□□□□ -0.37
PTPRN-218ENST00000497977 CFAP100Q494V2 611 aa12.77□□□□□ -0.37
PTPRN-218ENST00000497977 CCDC102BQ68D86 513 aa12.77□□□□□ -0.37
PTPRN-218ENST00000497977 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
PTPRN-218ENST00000497977 XAGE2Q96GT9 111 aa12.77□□□□□ -0.37
PTPRN-218ENST00000497977 BEGAINQ9BUH8 593 aa12.77□□□□□ -0.37
PTPRN-218ENST00000497977 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.37
PTPRN-218ENST00000497977 PPP1R12BO60237 982 aaPredicted RBP12.76□□□□□ -0.37
PTPRN-218ENST00000497977 LDHCP07864 332 aa12.76□□□□□ -0.37
PTPRN-218ENST00000497977 GSTO1P78417 241 aa12.76□□□□□ -0.37
PTPRN-218ENST00000497977 MAP2K1Q02750 393 aaPredicted RBP12.76□□□□□ -0.37
PTPRN-218ENST00000497977 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
PTPRN-218ENST00000497977 CEP85Q6P2H3 762 aa12.76□□□□□ -0.37
PTPRN-218ENST00000497977 HHIPL2Q6UWX4 724 aa12.76□□□□□ -0.37
PTPRN-218ENST00000497977 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
PTPRN-218ENST00000497977 CLASRPQ8N2M8 674 aaKnown RBP12.76□□□□□ -0.37
PTPRN-218ENST00000497977 MXD3Q9BW11 206 aa12.76□□□□□ -0.37
PTPRN-218ENST00000497977 ZBTB47Q9UFB7 747 aaPredicted RBP12.76□□□□□ -0.37
PTPRN-218ENST00000497977 IQSEC3Q9UPP2 1182 aaPredicted RBP12.76□□□□□ -0.37
PTPRN-218ENST00000497977 TLL2Q9Y6L7 1015 aa12.76□□□□□ -0.37
PTPRN-218ENST00000497977 COL4A5P29400 1685 aa12.76□□□□□ -0.37
PTPRN-218ENST00000497977 TAF1P21675 1872 aa12.76□□□□□ -0.37
PTPRN-218ENST00000497977 SHTN1A0MZ66 631 aa12.75□□□□□ -0.37
PTPRN-218ENST00000497977 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
PTPRN-218ENST00000497977 UNCXA6NJT0 531 aa12.75□□□□□ -0.37
PTPRN-218ENST00000497977 RASSF10A6NK89 507 aa12.75□□□□□ -0.37
PTPRN-218ENST00000497977 TRAF5O00463 557 aa12.75□□□□□ -0.37
PTPRN-218ENST00000497977 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
PTPRN-218ENST00000497977 MAP2K2P36507 400 aa12.75□□□□□ -0.37
PTPRN-218ENST00000497977 CRKP46108 304 aa12.75□□□□□ -0.37
PTPRN-218ENST00000497977 TTLL12Q14166 644 aaPredicted RBP12.75□□□□□ -0.37
PTPRN-218ENST00000497977 TTC39AQ5SRH9 613 aa12.75□□□□□ -0.37
PTPRN-218ENST00000497977 CST9Q5W186 159 aa12.75□□□□□ -0.37
PTPRN-218ENST00000497977 ARMC9Q7Z3E5 817 aa12.75□□□□□ -0.37
PTPRN-218ENST00000497977 GBA2Q9HCG7 927 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms