RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 C2orf69Q8N8R5 385 aa19.12■□□□□ 0.65
NUP50-219ENST00000497960 TDRD7Q8NHU6 1098 aaKnown RBP19.12■□□□□ 0.65
NUP50-219ENST00000497960 HHIPL1Q96JK4 782 aa19.12■□□□□ 0.65
NUP50-219ENST00000497960 WNT10BO00744 389 aa19.11■□□□□ 0.65
NUP50-219ENST00000497960 PUM3Q15397 648 aaKnown RBP19.11■□□□□ 0.65
NUP50-219ENST00000497960 CYP4F22Q6NT55 531 aa19.11■□□□□ 0.65
NUP50-219ENST00000497960 CERS5Q8N5B7 392 aa19.11■□□□□ 0.65
NUP50-219ENST00000497960 VGLL2Q8N8G2 317 aa19.11■□□□□ 0.65
NUP50-219ENST00000497960 CLUAP1Q96AJ1 413 aa19.11■□□□□ 0.65
NUP50-219ENST00000497960 AIDAQ96BJ3 306 aa19.11■□□□□ 0.65
NUP50-219ENST00000497960 GBA2Q9HCG7 927 aaPredicted RBP19.11■□□□□ 0.65
NUP50-219ENST00000497960 FBXO3Q9UK99 471 aa19.11■□□□□ 0.65
NUP50-219ENST00000497960 JAG2Q9Y219 1238 aa19.11■□□□□ 0.65
NUP50-219ENST00000497960 FAM205AQ6ZU69 1335 aa19.1■□□□□ 0.65
NUP50-219ENST00000497960 IFIT1P09914 478 aaKnown RBP19.1■□□□□ 0.65
NUP50-219ENST00000497960 HUNKP57058 714 aa19.1■□□□□ 0.65
NUP50-219ENST00000497960 DLGAP5Q15398 846 aa19.1■□□□□ 0.65
NUP50-219ENST00000497960 FBXO33Q7Z6M2 555 aa19.1■□□□□ 0.65
NUP50-219ENST00000497960 CDCA5Q96FF9 252 aa19.1■□□□□ 0.65
NUP50-219ENST00000497960 F8W031 263 aaPredicted RBP19.09■□□□□ 0.65
NUP50-219ENST00000497960 FRAT2O75474 233 aaPredicted RBP19.09■□□□□ 0.65
NUP50-219ENST00000497960 CIAO1O76071 339 aa19.09■□□□□ 0.65
NUP50-219ENST00000497960 MAP2K1Q02750 393 aaPredicted RBP19.09■□□□□ 0.65
NUP50-219ENST00000497960 SIL1Q9H173 461 aa19.09■□□□□ 0.65
NUP50-219ENST00000497960 SLC5A1P13866 664 aa19.08■□□□□ 0.64
NUP50-219ENST00000497960 MFSD14BQ5SR56 506 aa19.08■□□□□ 0.64
NUP50-219ENST00000497960 CEP126Q9P2H0 1117 aa19.08■□□□□ 0.64
NUP50-219ENST00000497960 RCAN3Q9UKA8 241 aa19.08■□□□□ 0.64
NUP50-219ENST00000497960 TNNQ9UQP3 1299 aa19.08■□□□□ 0.64
NUP50-219ENST00000497960 ZNF646O15015 1829 aaPredicted RBP19.08■□□□□ 0.64
NUP50-219ENST00000497960 FGFR2P21802 821 aa19.07■□□□□ 0.64
NUP50-219ENST00000497960 ATG9AQ7Z3C6 839 aa19.07■□□□□ 0.64
NUP50-219ENST00000497960 APOBEC3FQ8IUX4 373 aaKnown RBP19.07■□□□□ 0.64
NUP50-219ENST00000497960 FTSJ3Q8IY81 847 aaKnown RBP19.07■□□□□ 0.64
NUP50-219ENST00000497960 LPIN2Q92539 896 aa19.07■□□□□ 0.64
NUP50-219ENST00000497960 ZBED3Q96IU2 234 aaPredicted RBP19.07■□□□□ 0.64
NUP50-219ENST00000497960 WBP1LQ9NX94 342 aa19.07■□□□□ 0.64
NUP50-219ENST00000497960 SRGAP3O43295 1099 aa19.06■□□□□ 0.64
NUP50-219ENST00000497960 MYO1BO43795 1136 aa19.06■□□□□ 0.64
NUP50-219ENST00000497960 GNAI2P04899 355 aa19.06■□□□□ 0.64
NUP50-219ENST00000497960 MAP2K2P36507 400 aa19.06■□□□□ 0.64
NUP50-219ENST00000497960 IL15P40933 162 aaPredicted RBP19.06■□□□□ 0.64
NUP50-219ENST00000497960 BCAMP50895 628 aa19.06■□□□□ 0.64
NUP50-219ENST00000497960 RBM5P52756 815 aaKnown RBP eCLIP19.06■□□□□ 0.64
NUP50-219ENST00000497960 CHAF1AQ13111 956 aaPredicted RBP19.06■□□□□ 0.64
NUP50-219ENST00000497960 CFAP100Q494V2 611 aa19.06■□□□□ 0.64
NUP50-219ENST00000497960 MTMR14Q8NCE2 650 aa19.06■□□□□ 0.64
NUP50-219ENST00000497960 COPRSQ9NQ92 184 aa19.06■□□□□ 0.64
NUP50-219ENST00000497960 SCAF8Q9UPN6 1271 aaKnown RBP19.06■□□□□ 0.64
NUP50-219ENST00000497960 IQSEC3Q9UPP2 1182 aaPredicted RBP19.06■□□□□ 0.64
NUP50-219ENST00000497960 PCNTO95613 3336 aa19.05■□□□□ 0.64
NUP50-219ENST00000497960 NF2P35240 595 aa19.05■□□□□ 0.64
NUP50-219ENST00000497960 FKBP1BP68106 108 aa19.05■□□□□ 0.64
NUP50-219ENST00000497960 RGMBQ6NW40 437 aa19.05■□□□□ 0.64
NUP50-219ENST00000497960 TMEM57Q8N5G2 664 aa19.05■□□□□ 0.64
NUP50-219ENST00000497960 TBC1D22AQ8WUA7 517 aa19.05■□□□□ 0.64
NUP50-219ENST00000497960 BEGAINQ9BUH8 593 aa19.05■□□□□ 0.64
NUP50-219ENST00000497960 TTF2Q9UNY4 1162 aaKnown RBP19.05■□□□□ 0.64
NUP50-219ENST00000497960 PA2G4Q9UQ80 394 aaKnown RBP19.05■□□□□ 0.64
NUP50-219ENST00000497960 FOXN1O15353 648 aa19.04■□□□□ 0.64
NUP50-219ENST00000497960 AOC2O75106 756 aa19.04■□□□□ 0.64
NUP50-219ENST00000497960 CTCFP49711 727 aaPredicted RBP19.04■□□□□ 0.64
NUP50-219ENST00000497960 MTX1Q13505 466 aa19.04■□□□□ 0.64
NUP50-219ENST00000497960 ATP2B3Q16720 1220 aa19.04■□□□□ 0.64
NUP50-219ENST00000497960 SPDYE2BA6NHP3 402 aa19.03■□□□□ 0.64
NUP50-219ENST00000497960 SPDYE6P0CI01 402 aa19.03■□□□□ 0.64
NUP50-219ENST00000497960 NOGQ13253 232 aa19.03■□□□□ 0.64
NUP50-219ENST00000497960 PRAMEF18Q5VWM3 479 aa19.03■□□□□ 0.64
NUP50-219ENST00000497960 DZIP1LQ8IYY4 767 aaKnown RBP19.03■□□□□ 0.64
NUP50-219ENST00000497960 CCDC102AQ96A19 550 aa19.03■□□□□ 0.64
NUP50-219ENST00000497960 SERPINA10Q9UK55 444 aa19.03■□□□□ 0.64
NUP50-219ENST00000497960 ZNF157P51786 506 aaPredicted RBP19.02■□□□□ 0.64
NUP50-219ENST00000497960 TTLL12Q14166 644 aaPredicted RBP19.02■□□□□ 0.64
NUP50-219ENST00000497960 COL13A1Q5TAT6 717 aaPredicted RBP19.02■□□□□ 0.64
NUP50-219ENST00000497960 PRMT6Q96LA8 375 aaPredicted RBP19.02■□□□□ 0.64
NUP50-219ENST00000497960 GNL3LQ9NVN8 582 aaKnown RBP19.02■□□□□ 0.64
NUP50-219ENST00000497960 ITPRIPQ8IWB1 547 aa19.01■□□□□ 0.63
NUP50-219ENST00000497960 DEFB129Q9H1M3 183 aa19.01■□□□□ 0.63
NUP50-219ENST00000497960 PCDHAC2Q9Y5I4 1007 aa19.01■□□□□ 0.63
NUP50-219ENST00000497960 CLRN2A0PK11 232 aa19■□□□□ 0.63
NUP50-219ENST00000497960 VEZTQ9HBM0 779 aa19■□□□□ 0.63
NUP50-219ENST00000497960 SUGT1Q9Y2Z0 365 aa19■□□□□ 0.63
NUP50-219ENST00000497960 PPP2R3BQ9Y5P8 575 aa19■□□□□ 0.63
NUP50-219ENST00000497960 CRKP46108 304 aa18.99■□□□□ 0.63
NUP50-219ENST00000497960 WDR66Q8TBY9 1149 aa18.99■□□□□ 0.63
NUP50-219ENST00000497960 AKAP2Q9Y2D5 859 aa18.99■□□□□ 0.63
NUP50-219ENST00000497960 COL1A1P02452 1464 aaPredicted RBP18.98■□□□□ 0.63
NUP50-219ENST00000497960 HDLBPQ00341 1268 aaKnown RBP18.98■□□□□ 0.63
NUP50-219ENST00000497960 G3BP1Q13283 466 aaKnown RBP eCLIP18.98■□□□□ 0.63
NUP50-219ENST00000497960 TNFAIP1Q13829 316 aa18.98■□□□□ 0.63
NUP50-219ENST00000497960 ARMC9Q7Z3E5 817 aa18.98■□□□□ 0.63
NUP50-219ENST00000497960 PRDM10Q9NQV6 1147 aa18.98■□□□□ 0.63
NUP50-219ENST00000497960 THSD7BQ9C0I4 1608 aa18.98■□□□□ 0.63
NUP50-219ENST00000497960 PAPPA2Q9BXP8 1791 aa18.98■□□□□ 0.63
NUP50-219ENST00000497960 MAST3O60307 1309 aa18.98■□□□□ 0.63
NUP50-219ENST00000497960 PNMA6EA0A0J9YXQ4 647 aa18.97■□□□□ 0.63
NUP50-219ENST00000497960 FAM155AB1AL88 458 aaPredicted RBP18.97■□□□□ 0.63
NUP50-219ENST00000497960 UBE2Q2LH0YL09 131 aa18.97■□□□□ 0.63
NUP50-219ENST00000497960 CA12O43570 354 aa18.97■□□□□ 0.63
NUP50-219ENST00000497960 SLC10A3P09131 477 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms