RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 RAD17O75943 681 aa14.03□□□□□ -0.16
ERCC8-208ENST00000497892 TOMM70O94826 608 aa14.03□□□□□ -0.16
ERCC8-208ENST00000497892 KLRK1P26718 216 aa14.03□□□□□ -0.16
ERCC8-208ENST00000497892 KCNJ4P48050 445 aa14.03□□□□□ -0.16
ERCC8-208ENST00000497892 SCNN1DP51172 638 aa14.03□□□□□ -0.16
ERCC8-208ENST00000497892 PTPN12Q05209 780 aaKnown RBP14.03□□□□□ -0.16
ERCC8-208ENST00000497892 TNIP1Q15025 636 aa14.03□□□□□ -0.16
ERCC8-208ENST00000497892 LRRC24Q50LG9 513 aa14.03□□□□□ -0.16
ERCC8-208ENST00000497892 CIAPIN1Q6FI81 312 aa14.03□□□□□ -0.16
ERCC8-208ENST00000497892 ZNF609O15014 1411 aa14.03□□□□□ -0.16
ERCC8-208ENST00000497892 SNAP23O00161 211 aa14.02□□□□□ -0.17
ERCC8-208ENST00000497892 EYA2O00167 538 aa14.02□□□□□ -0.17
ERCC8-208ENST00000497892 ZBTB7BO15156 539 aaPredicted RBP14.02□□□□□ -0.17
ERCC8-208ENST00000497892 C15orf52Q6ZUT6 534 aaKnown RBP14.02□□□□□ -0.17
ERCC8-208ENST00000497892 TXNRD3Q86VQ6 643 aa14.02□□□□□ -0.17
ERCC8-208ENST00000497892 MICALL2Q8IY33 904 aa14.02□□□□□ -0.17
ERCC8-208ENST00000497892 C16orf71Q8IYS4 520 aaPredicted RBP14.02□□□□□ -0.17
ERCC8-208ENST00000497892 VGLL2Q8N8G2 317 aa14.02□□□□□ -0.17
ERCC8-208ENST00000497892 HACL1Q9UJ83 578 aa14.02□□□□□ -0.17
ERCC8-208ENST00000497892 SRGAP3O43295 1099 aa14.01□□□□□ -0.17
ERCC8-208ENST00000497892 PLIN1O60240 522 aa14.01□□□□□ -0.17
ERCC8-208ENST00000497892 CIAO1O76071 339 aa14.01□□□□□ -0.17
ERCC8-208ENST00000497892 C1QTNF8P60827 252 aa14.01□□□□□ -0.17
ERCC8-208ENST00000497892 MVPQ14764 893 aaKnown RBP14.01□□□□□ -0.17
ERCC8-208ENST00000497892 PODNQ7Z5L7 613 aa14.01□□□□□ -0.17
ERCC8-208ENST00000497892 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.01□□□□□ -0.17
ERCC8-208ENST00000497892 RBM46Q8TBY0 533 aaKnown RBP14.01□□□□□ -0.17
ERCC8-208ENST00000497892 COA1Q9GZY4 146 aa14.01□□□□□ -0.17
ERCC8-208ENST00000497892 TAF1DQ9H5J8 278 aaPredicted RBP14.01□□□□□ -0.17
ERCC8-208ENST00000497892 COPRSQ9NQ92 184 aa14.01□□□□□ -0.17
ERCC8-208ENST00000497892 ARAP2Q8WZ64 1704 aa14.01□□□□□ -0.17
ERCC8-208ENST00000497892 PSMD14O00487 310 aa14□□□□□ -0.17
ERCC8-208ENST00000497892 PDE8BO95263 885 aa14□□□□□ -0.17
ERCC8-208ENST00000497892 LMOD1P29536 600 aaPredicted RBP14□□□□□ -0.17
ERCC8-208ENST00000497892 EPHX2P34913 555 aa14□□□□□ -0.17
ERCC8-208ENST00000497892 GMPSP49915 693 aaPredicted RBP14□□□□□ -0.17
ERCC8-208ENST00000497892 UBE4AQ14139 1066 aa14□□□□□ -0.17
ERCC8-208ENST00000497892 PDE3AQ14432 1141 aa14□□□□□ -0.17
ERCC8-208ENST00000497892 METTL24Q5JXM2 366 aa14□□□□□ -0.17
ERCC8-208ENST00000497892 ATG9AQ7Z3C6 839 aa14□□□□□ -0.17
ERCC8-208ENST00000497892 KCNQ5Q9NR82 932 aa14□□□□□ -0.17
ERCC8-208ENST00000497892 GPRC5DQ9NZD1 345 aa14□□□□□ -0.17
ERCC8-208ENST00000497892 SIL1Q9H173 461 aa13.99□□□□□ -0.17
ERCC8-208ENST00000497892 C1orf115Q9H7X2 142 aa13.99□□□□□ -0.17
ERCC8-208ENST00000497892 DDX19BQ9UMR2 479 aa13.99□□□□□ -0.17
ERCC8-208ENST00000497892 PA2G4Q9UQ80 394 aaKnown RBP13.99□□□□□ -0.17
ERCC8-208ENST00000497892 PNMA6EA0A0J9YXQ4 647 aa13.98□□□□□ -0.17
ERCC8-208ENST00000497892 VIL1P09327 827 aaKnown RBP13.98□□□□□ -0.17
ERCC8-208ENST00000497892 HOXB3P14651 431 aaPredicted RBP13.98□□□□□ -0.17
ERCC8-208ENST00000497892 RPS12P25398 132 aaKnown RBP13.98□□□□□ -0.17
ERCC8-208ENST00000497892 EPS15P42566 896 aa13.98□□□□□ -0.17
ERCC8-208ENST00000497892 PUM3Q15397 648 aaKnown RBP13.98□□□□□ -0.17
ERCC8-208ENST00000497892 ZNF804AQ7Z570 1209 aa13.98□□□□□ -0.17
ERCC8-208ENST00000497892 PNMA8AQ86V59 439 aaPredicted RBP13.98□□□□□ -0.17
ERCC8-208ENST00000497892 COG6Q9Y2V7 657 aa13.98□□□□□ -0.17
ERCC8-208ENST00000497892 STK24Q9Y6E0 443 aa13.98□□□□□ -0.17
ERCC8-208ENST00000497892 USP17L3A6NCW0 530 aa13.97□□□□□ -0.17
ERCC8-208ENST00000497892 USP17L4A6NCW7 530 aa13.97□□□□□ -0.17
ERCC8-208ENST00000497892 IL15P40933 162 aaPredicted RBP13.97□□□□□ -0.17
ERCC8-208ENST00000497892 FSTL1Q12841 308 aa13.97□□□□□ -0.17
ERCC8-208ENST00000497892 C20orf194Q5TEA3 1177 aa13.97□□□□□ -0.17
ERCC8-208ENST00000497892 STRIP1Q5VSL9 837 aa13.97□□□□□ -0.17
ERCC8-208ENST00000497892 RSBN1LQ6PCB5 846 aaPredicted RBP13.97□□□□□ -0.17
ERCC8-208ENST00000497892 USP17L1Q7RTZ2 530 aa13.97□□□□□ -0.17
ERCC8-208ENST00000497892 SMC1BQ8NDV3 1235 aa13.97□□□□□ -0.17
ERCC8-208ENST00000497892 DPF2Q92785 391 aa13.97□□□□□ -0.17
ERCC8-208ENST00000497892 CD209Q9NNX6 404 aa13.97□□□□□ -0.17
ERCC8-208ENST00000497892 MYH13Q9UKX3 1938 aa13.97□□□□□ -0.17
ERCC8-208ENST00000497892 IL1R1P14778 569 aa13.96□□□□□ -0.17
ERCC8-208ENST00000497892 FGFR2P21802 821 aa13.96□□□□□ -0.17
ERCC8-208ENST00000497892 EMP3P54852 163 aa13.96□□□□□ -0.17
ERCC8-208ENST00000497892 ATP8B2P98198 1209 aa13.96□□□□□ -0.17
ERCC8-208ENST00000497892 DACT2Q5SW24 774 aa13.96□□□□□ -0.17
ERCC8-208ENST00000497892 LDHDQ86WU2 507 aa13.96□□□□□ -0.17
ERCC8-208ENST00000497892 SSH3Q8TE77 659 aa13.96□□□□□ -0.17
ERCC8-208ENST00000497892 ADARB2Q9NS39 739 aaKnown RBP13.96□□□□□ -0.17
ERCC8-208ENST00000497892 MYO3BQ8WXR4 1341 aa13.95□□□□□ -0.18
ERCC8-208ENST00000497892 SHTN1A0MZ66 631 aa13.95□□□□□ -0.18
ERCC8-208ENST00000497892 STK25O00506 426 aa13.95□□□□□ -0.18
ERCC8-208ENST00000497892 GYG1P46976 350 aa13.95□□□□□ -0.18
ERCC8-208ENST00000497892 RRP1P56182 461 aaKnown RBP13.95□□□□□ -0.18
ERCC8-208ENST00000497892 EAPPQ56P03 285 aaPredicted RBP13.95□□□□□ -0.18
ERCC8-208ENST00000497892 CEP85Q6P2H3 762 aa13.95□□□□□ -0.18
ERCC8-208ENST00000497892 USP50Q70EL3 339 aaPredicted RBP13.95□□□□□ -0.18
ERCC8-208ENST00000497892 AGBL3Q8NEM8 1001 aa13.95□□□□□ -0.18
ERCC8-208ENST00000497892 FBXO22Q8NEZ5 403 aa13.95□□□□□ -0.18
ERCC8-208ENST00000497892 FAM84BQ96KN1 310 aaPredicted RBP13.95□□□□□ -0.18
ERCC8-208ENST00000497892 GMLQ99445 158 aa13.95□□□□□ -0.18
ERCC8-208ENST00000497892 CHMP4BQ9H444 224 aaKnown RBP13.95□□□□□ -0.18
ERCC8-208ENST00000497892 ZBTB40Q9NUA8 1239 aa13.95□□□□□ -0.18
ERCC8-208ENST00000497892 CNOT7Q9UIV1 285 aaKnown RBP13.95□□□□□ -0.18
ERCC8-208ENST00000497892 IFIT1P09914 478 aaKnown RBP13.94□□□□□ -0.18
ERCC8-208ENST00000497892 HIBADHP31937 336 aaKnown RBP13.94□□□□□ -0.18
ERCC8-208ENST00000497892 ATP2B3Q16720 1220 aa13.94□□□□□ -0.18
ERCC8-208ENST00000497892 TMEM92Q6UXU6 159 aa13.94□□□□□ -0.18
ERCC8-208ENST00000497892 LPIN2Q92539 896 aa13.94□□□□□ -0.18
ERCC8-208ENST00000497892 CEP126Q9P2H0 1117 aa13.94□□□□□ -0.18
ERCC8-208ENST00000497892 H7C1D1 291 aa13.93□□□□□ -0.18
ERCC8-208ENST00000497892 SLC5A1P13866 664 aa13.93□□□□□ -0.18
ERCC8-208ENST00000497892 GTF2IP78347 998 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms